RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 POLR3AO14802 1390 aaPredicted RBP29.08■■■□□ 2.25
HLA-B-250ENST00000434333 COL14A1Q05707 1796 aaKnown RBP29.06■■■□□ 2.24
HLA-B-250ENST00000434333 BRWD3Q6RI45 1802 aa29.06■■■□□ 2.24
HLA-B-250ENST00000434333 CCDC61Q9Y6R9 512 aa29.05■■■□□ 2.24
HLA-B-250ENST00000434333 TRPM1Q7Z4N2 1603 aa29.05■■■□□ 2.24
HLA-B-250ENST00000434333 CENPJQ9HC77 1338 aaPredicted RBP29.04■■■□□ 2.24
HLA-B-250ENST00000434333 PAK3O75914 559 aaPredicted RBP29.04■■■□□ 2.24
HLA-B-250ENST00000434333 QRICH2Q9H0J4 1663 aa29.04■■■□□ 2.24
HLA-B-250ENST00000434333 ACEP12821 1306 aa29.03■■■□□ 2.24
HLA-B-250ENST00000434333 PLEKHG3A1L390 1219 aa29.03■■■□□ 2.24
HLA-B-250ENST00000434333 PHRF1Q9P1Y6 1649 aaKnown RBP29.02■■■□□ 2.24
HLA-B-250ENST00000434333 ONECUT3O60422 494 aaPredicted RBP29.01■■■□□ 2.23
HLA-B-250ENST00000434333 NBPF8Q3BBV2 869 aa29■■■□□ 2.23
HLA-B-250ENST00000434333 BTG4Q9NY30 223 aa29■■■□□ 2.23
HLA-B-250ENST00000434333 SEPT12Q8IYM1 358 aa28.99■■■□□ 2.23
HLA-B-250ENST00000434333 CCDC9Q9Y3X0 531 aaKnown RBP28.98■■■□□ 2.23
HLA-B-250ENST00000434333 NEUROD1Q13562 356 aa28.97■■■□□ 2.23
HLA-B-250ENST00000434333 PPIP5K1Q6PFW1 1433 aa28.96■■■□□ 2.23
HLA-B-250ENST00000434333 SRPK2P78362 688 aaKnown RBP28.95■■■□□ 2.22
HLA-B-250ENST00000434333 CABP2Q9NPB3 220 aa28.95■■■□□ 2.22
HLA-B-250ENST00000434333 CCDC125Q86Z20 511 aa28.94■■■□□ 2.22
HLA-B-250ENST00000434333 KIAA0232Q92628 1395 aa28.93■■■□□ 2.22
HLA-B-250ENST00000434333 NUTM2GQ5VZR2 741 aa28.92■■■□□ 2.22
HLA-B-250ENST00000434333 PRDM11Q9NQV5 511 aa28.92■■■□□ 2.22
HLA-B-250ENST00000434333 NRKQ7Z2Y5 1582 aa28.92■■■□□ 2.22
HLA-B-250ENST00000434333 BLMP54132 1417 aaPredicted RBP28.9■■■□□ 2.22
HLA-B-250ENST00000434333 ROCK2O75116 1388 aaKnown RBP28.89■■■□□ 2.22
HLA-B-250ENST00000434333 SPATA31A5Q5VU36 1347 aa28.89■■■□□ 2.21
HLA-B-250ENST00000434333 SPATA31A7Q8IWB4 1347 aa28.89■■■□□ 2.21
HLA-B-250ENST00000434333 FAM98CQ17RN3 349 aaKnown RBP28.88■■■□□ 2.21
HLA-B-250ENST00000434333 USP19O94966 1318 aa28.88■■■□□ 2.21
HLA-B-250ENST00000434333 CHRNA2Q15822 529 aa28.87■■■□□ 2.21
HLA-B-250ENST00000434333 KRT27Q7Z3Y8 459 aa28.87■■■□□ 2.21
HLA-B-250ENST00000434333 THSD7AQ9UPZ6 1657 aa28.86■■■□□ 2.21
HLA-B-250ENST00000434333 ZC3H6P61129 1189 aaKnown RBP28.86■■■□□ 2.21
HLA-B-250ENST00000434333 ABTB2Q8N961 1025 aa28.86■■■□□ 2.21
HLA-B-250ENST00000434333 USP6P35125 1406 aa28.85■■■□□ 2.21
HLA-B-250ENST00000434333 CABP1Q9NZU7 370 aa28.84■■■□□ 2.21
HLA-B-250ENST00000434333 BRD4O60885 1362 aaPredicted RBP28.84■■■□□ 2.21
HLA-B-250ENST00000434333 LMO7Q8WWI1 1683 aa28.83■■■□□ 2.21
HLA-B-250ENST00000434333 A0A0G2JS52 829 aa28.82■■■□□ 2.2
HLA-B-250ENST00000434333 MYT1Q01538 1121 aa28.82■■■□□ 2.2
HLA-B-250ENST00000434333 EVC2Q86UK5 1308 aa28.82■■■□□ 2.2
HLA-B-250ENST00000434333 SSH2Q76I76 1423 aa28.81■■■□□ 2.2
HLA-B-250ENST00000434333 CPDO75976 1380 aa28.81■■■□□ 2.2
HLA-B-250ENST00000434333 SPATA31A1Q5TZJ5 1347 aa28.81■■■□□ 2.2
HLA-B-250ENST00000434333 CAMTA1Q9Y6Y1 1673 aa28.8■■■□□ 2.2
HLA-B-250ENST00000434333 NLRP13Q86W25 1043 aa28.79■■■□□ 2.2
HLA-B-250ENST00000434333 DEFB132Q7Z7B7 95 aa28.78■■■□□ 2.2
HLA-B-250ENST00000434333 STRN4Q9NRL3 753 aa28.77■■■□□ 2.2
HLA-B-250ENST00000434333 PIK3C2AO00443 1686 aa28.77■■■□□ 2.2
HLA-B-250ENST00000434333 SLIT3O75094 1523 aa28.76■■■□□ 2.19
HLA-B-250ENST00000434333 GCP02774 474 aa28.76■■■□□ 2.19
HLA-B-250ENST00000434333 ZRANB1Q9UGI0 708 aa28.75■■■□□ 2.19
HLA-B-250ENST00000434333 AKAP12Q02952 1782 aa28.75■■■□□ 2.19
HLA-B-250ENST00000434333 SRCAPQ6ZRS2 3230 aa28.75■■■□□ 2.19
HLA-B-250ENST00000434333 SBNO2Q9Y2G9 1366 aa28.74■■■□□ 2.19
HLA-B-250ENST00000434333 FAM182BQ5T319 152 aa28.72■■■□□ 2.19
HLA-B-250ENST00000434333 SF3B2Q13435 895 aaKnown RBP28.71■■■□□ 2.19
HLA-B-250ENST00000434333 TONSLQ96HA7 1378 aa28.71■■■□□ 2.19
HLA-B-250ENST00000434333 NLRP6P59044 892 aa28.7■■■□□ 2.18
HLA-B-250ENST00000434333 CPSF1Q10570 1443 aaKnown RBP28.69■■■□□ 2.18
HLA-B-250ENST00000434333 LARP1Q6PKG0 1096 aaKnown RBP28.69■■■□□ 2.18
HLA-B-250ENST00000434333 CARD11Q9BXL7 1154 aa28.69■■■□□ 2.18
HLA-B-250ENST00000434333 COL5A2P05997 1499 aaPredicted RBP28.69■■■□□ 2.18
HLA-B-250ENST00000434333 EVA1CP58658 441 aa28.68■■■□□ 2.18
HLA-B-250ENST00000434333 RGPD1P0DJD0 1748 aa28.68■■■□□ 2.18
HLA-B-250ENST00000434333 BARGINQ6ZT62 677 aa28.67■■■□□ 2.18
HLA-B-250ENST00000434333 USP35Q9P2H5 1018 aa28.67■■■□□ 2.18
HLA-B-250ENST00000434333 TTC21BQ7Z4L5 1316 aa28.67■■■□□ 2.18
HLA-B-250ENST00000434333 TRIM26Q12899 539 aaPredicted RBP28.66■■■□□ 2.18
HLA-B-250ENST00000434333 ZNF692Q9BU19 519 aaPredicted RBP28.66■■■□□ 2.18
HLA-B-250ENST00000434333 TNS1Q9HBL0 1735 aaKnown RBP28.66■■■□□ 2.18
HLA-B-250ENST00000434333 COL18A1P39060 1754 aa28.65■■■□□ 2.18
HLA-B-250ENST00000434333 AATKQ6ZMQ8 1374 aa28.64■■■□□ 2.18
HLA-B-250ENST00000434333 MON2Q7Z3U7 1717 aa28.64■■■□□ 2.18
HLA-B-250ENST00000434333 BAG6P46379 1132 aa28.62■■■□□ 2.17
HLA-B-250ENST00000434333 TCP11L2Q8N4U5 519 aa28.62■■■□□ 2.17
HLA-B-250ENST00000434333 CD163L1Q9NR16 1453 aa28.61■■■□□ 2.17
HLA-B-250ENST00000434333 TTC21AQ8NDW8 1320 aa28.61■■■□□ 2.17
HLA-B-250ENST00000434333 KTN1Q86UP2 1357 aaKnown RBP28.6■■■□□ 2.17
HLA-B-250ENST00000434333 DISP2A7MBM2 1401 aa28.6■■■□□ 2.17
HLA-B-250ENST00000434333 CRB1P82279 1406 aa28.6■■■□□ 2.17
HLA-B-250ENST00000434333 THRAP3Q9Y2W1 955 aaKnown RBP28.59■■■□□ 2.17
HLA-B-250ENST00000434333 PARP4Q9UKK3 1724 aaKnown RBP28.59■■■□□ 2.17
HLA-B-250ENST00000434333 ZBTB7CA1YPR0 619 aa28.58■■■□□ 2.17
HLA-B-250ENST00000434333 NFAT5O94916 1531 aa28.57■■■□□ 2.16
HLA-B-250ENST00000434333 EN1Q05925 392 aaPredicted RBP28.56■■■□□ 2.16
HLA-B-250ENST00000434333 FAM196AQ6ZSG2 479 aa28.56■■■□□ 2.16
HLA-B-250ENST00000434333 ARHGEF25Q86VW2 580 aa28.56■■■□□ 2.16
HLA-B-250ENST00000434333 AXIN2Q9Y2T1 843 aa28.56■■■□□ 2.16
HLA-B-250ENST00000434333 USP54Q70EL1 1684 aa28.55■■■□□ 2.16
HLA-B-250ENST00000434333 KCNH5Q8NCM2 988 aa28.54■■■□□ 2.16
HLA-B-250ENST00000434333 RGPD5Q99666 1765 aa28.52■■■□□ 2.16
HLA-B-250ENST00000434333 TRIM37O94972 964 aa28.52■■■□□ 2.16
HLA-B-250ENST00000434333 PDE3BQ13370 1112 aa28.52■■■□□ 2.16
HLA-B-250ENST00000434333 USP31Q70CQ4 1352 aa28.51■■■□□ 2.16
HLA-B-250ENST00000434333 LRRC37A3O60309 1634 aa28.51■■■□□ 2.15
HLA-B-250ENST00000434333 WNK3Q9BYP7 1800 aa28.5■■■□□ 2.15
HLA-B-250ENST00000434333 WDR17Q8IZU2 1322 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms