RNA–Protein interactions for RNA: ENST00000434050.5

MTA1-206, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 2,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-206ENST00000434050 C19orf44Q9H6X5 657 aa24.57■■□□□ 1.52
MTA1-206ENST00000434050 MAP2P11137 1827 aaKnown RBP24.57■■□□□ 1.52
MTA1-206ENST00000434050 C14orf37Q86TY3 774 aa24.57■■□□□ 1.52
MTA1-206ENST00000434050 USP54Q70EL1 1684 aa24.56■■□□□ 1.52
MTA1-206ENST00000434050 XIRP1Q702N8 1843 aaKnown RBP24.56■■□□□ 1.52
MTA1-206ENST00000434050 TMEM94Q12767 1356 aa24.56■■□□□ 1.52
MTA1-206ENST00000434050 AATKQ6ZMQ8 1374 aa24.56■■□□□ 1.52
MTA1-206ENST00000434050 WDR43Q15061 677 aaKnown RBP eCLIP24.55■■□□□ 1.52
MTA1-206ENST00000434050 NGDNQ8NEJ9 315 aaKnown RBP24.55■■□□□ 1.52
MTA1-206ENST00000434050 TNNT2P45379 298 aaPredicted RBP24.55■■□□□ 1.52
MTA1-206ENST00000434050 MTHFSP49914 203 aa24.55■■□□□ 1.52
MTA1-206ENST00000434050 RBM33Q96EV2 1170 aaKnown RBP24.55■■□□□ 1.52
MTA1-206ENST00000434050 CFAP53Q96M91 514 aa24.55■■□□□ 1.52
MTA1-206ENST00000434050 KIF1AQ12756 1690 aa24.55■■□□□ 1.52
MTA1-206ENST00000434050 OVOS2A0A0J9YW53 1432 aa24.54■■□□□ 1.52
MTA1-206ENST00000434050 OVOS2Q6IE36 1432 aa24.54■■□□□ 1.52
MTA1-206ENST00000434050 NME9Q86XW9 330 aa24.54■■□□□ 1.52
MTA1-206ENST00000434050 PMFBP1Q8TBY8 1022 aa24.54■■□□□ 1.52
MTA1-206ENST00000434050 SMG6Q86US8 1419 aaKnown RBP24.53■■□□□ 1.52
MTA1-206ENST00000434050 COG3Q96JB2 828 aa24.53■■□□□ 1.52
MTA1-206ENST00000434050 PHF8Q9UPP1 1060 aa24.53■■□□□ 1.52
MTA1-206ENST00000434050 LRRC7Q96NW7 1537 aa24.52■■□□□ 1.52
MTA1-206ENST00000434050 USP31Q70CQ4 1352 aa24.51■■□□□ 1.51
MTA1-206ENST00000434050 ADAMTS8Q9UP79 889 aa24.51■■□□□ 1.51
MTA1-206ENST00000434050 PIK3C2AO00443 1686 aa24.51■■□□□ 1.51
MTA1-206ENST00000434050 COL3A1P02461 1466 aaPredicted RBP24.51■■□□□ 1.51
MTA1-206ENST00000434050 PNPLA6Q8IY17 1366 aa24.51■■□□□ 1.51
MTA1-206ENST00000434050 C1orf167Q5SNV9 1468 aa24.49■■□□□ 1.51
MTA1-206ENST00000434050 MST1RQ04912 1400 aa24.47■■□□□ 1.51
MTA1-206ENST00000434050 CDK12Q9NYV4 1490 aaPredicted RBP24.46■■□□□ 1.51
MTA1-206ENST00000434050 MARF1Q9Y4F3 1742 aaKnown RBP24.46■■□□□ 1.51
MTA1-206ENST00000434050 ATF3P18847 181 aa24.45■■□□□ 1.5
MTA1-206ENST00000434050 ZRANB1Q9UGI0 708 aa24.45■■□□□ 1.5
MTA1-206ENST00000434050 MSH6P52701 1360 aa24.45■■□□□ 1.5
MTA1-206ENST00000434050 ESCO1Q5FWF5 840 aa24.44■■□□□ 1.5
MTA1-206ENST00000434050 CADPS2Q86UW7 1296 aa24.44■■□□□ 1.5
MTA1-206ENST00000434050 POLKQ9UBT6 870 aa24.44■■□□□ 1.5
MTA1-206ENST00000434050 ZNF335Q9H4Z2 1342 aaPredicted RBP24.44■■□□□ 1.5
MTA1-206ENST00000434050 TRPM3Q9HCF6 1732 aaPredicted RBP24.41■■□□□ 1.5
MTA1-206ENST00000434050 NGEFQ8N5V2 710 aa24.39■■□□□ 1.5
MTA1-206ENST00000434050 NUDCQ9Y266 331 aa24.39■■□□□ 1.5
MTA1-206ENST00000434050 ORAI2Q96SN7 254 aa24.39■■□□□ 1.49
MTA1-206ENST00000434050 PSME1Q06323 249 aa24.37■■□□□ 1.49
MTA1-206ENST00000434050 DIAPH1O60610 1272 aaKnown RBP24.36■■□□□ 1.49
MTA1-206ENST00000434050 PDE3BQ13370 1112 aa24.36■■□□□ 1.49
MTA1-206ENST00000434050 LTBP4Q8N2S1 1624 aa24.35■■□□□ 1.49
MTA1-206ENST00000434050 EMILIN1Q9Y6C2 1016 aa24.34■■□□□ 1.49
MTA1-206ENST00000434050 NLRP6P59044 892 aa24.33■■□□□ 1.49
MTA1-206ENST00000434050 PEAK1Q9H792 1746 aa24.33■■□□□ 1.49
MTA1-206ENST00000434050 KIF24Q5T7B8 1368 aa24.33■■□□□ 1.49
MTA1-206ENST00000434050 ABTB2Q8N961 1025 aa24.33■■□□□ 1.48
MTA1-206ENST00000434050 IQSEC2Q5JU85 1478 aa24.32■■□□□ 1.48
MTA1-206ENST00000434050 FBLN1P23142 703 aa24.32■■□□□ 1.48
MTA1-206ENST00000434050 NCBP3Q53F19 620 aaKnown RBP24.32■■□□□ 1.48
MTA1-206ENST00000434050 RUNDC1Q96C34 613 aa24.32■■□□□ 1.48
MTA1-206ENST00000434050 ALS2Q96Q42 1657 aa24.32■■□□□ 1.48
MTA1-206ENST00000434050 FOXO3O43524 673 aa24.31■■□□□ 1.48
MTA1-206ENST00000434050 PAK3O75914 559 aaPredicted RBP24.3■■□□□ 1.48
MTA1-206ENST00000434050 U2AF1L5P0DN76 240 aaPredicted RBP24.3■■□□□ 1.48
MTA1-206ENST00000434050 U2AF1Q01081 240 aaKnown RBP eCLIP24.3■■□□□ 1.48
MTA1-206ENST00000434050 RRS1Q15050 365 aaKnown RBP24.3■■□□□ 1.48
MTA1-206ENST00000434050 PHRF1Q9P1Y6 1649 aaKnown RBP24.28■■□□□ 1.48
MTA1-206ENST00000434050 SBNO1A3KN83 1393 aa24.28■■□□□ 1.48
MTA1-206ENST00000434050 CCDC146Q8IYE0 955 aa24.28■■□□□ 1.48
MTA1-206ENST00000434050 PNNQ9H307 717 aaKnown RBP24.28■■□□□ 1.48
MTA1-206ENST00000434050 SLIT3O75094 1523 aa24.28■■□□□ 1.48
MTA1-206ENST00000434050 ZNF521Q96K83 1311 aa24.28■■□□□ 1.48
MTA1-206ENST00000434050 PPM1GO15355 546 aaPredicted RBP24.28■■□□□ 1.48
MTA1-206ENST00000434050 IL13P35225 146 aa24.28■■□□□ 1.48
MTA1-206ENST00000434050 KRT28Q7Z3Y7 464 aa24.28■■□□□ 1.48
MTA1-206ENST00000434050 NFAT5O94916 1531 aa24.27■■□□□ 1.48
MTA1-206ENST00000434050 NPHP3Q7Z494 1330 aa24.27■■□□□ 1.48
MTA1-206ENST00000434050 APAF1O14727 1248 aa24.26■■□□□ 1.47
MTA1-206ENST00000434050 LTN1O94822 1766 aa24.26■■□□□ 1.47
MTA1-206ENST00000434050 FLT4P35916 1363 aa24.26■■□□□ 1.47
MTA1-206ENST00000434050 U2SURPO15042 1029 aaKnown RBP24.26■■□□□ 1.47
MTA1-206ENST00000434050 MAP3K19Q56UN5 1328 aa24.25■■□□□ 1.47
MTA1-206ENST00000434050 RGPD1P0DJD0 1748 aa24.25■■□□□ 1.47
MTA1-206ENST00000434050 FCHSD2O94868 740 aa24.25■■□□□ 1.47
MTA1-206ENST00000434050 RTL1A6NKG5 1358 aa24.24■■□□□ 1.47
MTA1-206ENST00000434050 PXDNQ92626 1479 aa24.24■■□□□ 1.47
MTA1-206ENST00000434050 KCNH5Q8NCM2 988 aa24.23■■□□□ 1.47
MTA1-206ENST00000434050 PLEKHF1Q96S99 279 aa24.23■■□□□ 1.47
MTA1-206ENST00000434050 USP19O94966 1318 aa24.23■■□□□ 1.47
MTA1-206ENST00000434050 SLAIN2Q9P270 581 aa24.22■■□□□ 1.47
MTA1-206ENST00000434050 GTF3C3Q9Y5Q9 886 aa24.22■■□□□ 1.47
MTA1-206ENST00000434050 CCDC27Q2M243 656 aa24.21■■□□□ 1.47
MTA1-206ENST00000434050 TCP11L2Q8N4U5 519 aa24.21■■□□□ 1.47
MTA1-206ENST00000434050 SALL2Q9Y467 1007 aaPredicted RBP24.21■■□□□ 1.47
MTA1-206ENST00000434050 SENP3-EIF4A1A0A087X0R7 540 aa24.2■■□□□ 1.47
MTA1-206ENST00000434050 BRINP3Q76B58 766 aa24.2■■□□□ 1.47
MTA1-206ENST00000434050 PHF23Q9BUL5 403 aaPredicted RBP24.2■■□□□ 1.47
MTA1-206ENST00000434050 NUTM2GQ5VZR2 741 aa24.2■■□□□ 1.46
MTA1-206ENST00000434050 RSPH6AQ9H0K4 717 aa24.19■■□□□ 1.46
MTA1-206ENST00000434050 EIF4A2Q14240 407 aaKnown RBP24.19■■□□□ 1.46
MTA1-206ENST00000434050 TNS3Q68CZ2 1445 aa24.18■■□□□ 1.46
MTA1-206ENST00000434050 XPCQ01831 940 aaPredicted RBP24.18■■□□□ 1.46
MTA1-206ENST00000434050 NHSL1Q5SYE7 1610 aa24.18■■□□□ 1.46
MTA1-206ENST00000434050 MED1Q15648 1581 aaPredicted RBP24.17■■□□□ 1.46
MTA1-206ENST00000434050 AMPHP49418 695 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms