RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 POLR3AO14802 1390 aaPredicted RBP31.68■■■□□ 2.66
SEMA3B-205ENST00000434030 UNC5CLQ8IV45 518 aa31.68■■■□□ 2.66
SEMA3B-205ENST00000434030 NWD2Q9ULI1 1742 aa31.68■■■□□ 2.66
SEMA3B-205ENST00000434030 ACEP12821 1306 aa31.68■■■□□ 2.66
SEMA3B-205ENST00000434030 CABP2Q9NPB3 220 aa31.67■■■□□ 2.66
SEMA3B-205ENST00000434030 UPF1Q92900 1129 aaKnown RBP eCLIP31.66■■■□□ 2.66
SEMA3B-205ENST00000434030 TONSLQ96HA7 1378 aa31.66■■■□□ 2.66
SEMA3B-205ENST00000434030 GJD4Q96KN9 370 aaPredicted RBP31.64■■■□□ 2.66
SEMA3B-205ENST00000434030 FAM83GA6ND36 823 aa31.62■■■□□ 2.65
SEMA3B-205ENST00000434030 PPIP5K1Q6PFW1 1433 aa31.62■■■□□ 2.65
SEMA3B-205ENST00000434030 GLI3P10071 1580 aa31.6■■■□□ 2.65
SEMA3B-205ENST00000434030 EVC2Q86UK5 1308 aa31.59■■■□□ 2.65
SEMA3B-205ENST00000434030 COL14A1Q05707 1796 aaKnown RBP31.58■■■□□ 2.65
SEMA3B-205ENST00000434030 PHRF1Q9P1Y6 1649 aaKnown RBP31.57■■■□□ 2.64
SEMA3B-205ENST00000434030 RALGAPBQ86X10 1494 aa31.57■■■□□ 2.64
SEMA3B-205ENST00000434030 NRAPQ86VF7 1730 aa31.56■■■□□ 2.64
SEMA3B-205ENST00000434030 CABP1Q9NZU7 370 aa31.55■■■□□ 2.64
SEMA3B-205ENST00000434030 VPS72Q15906 364 aa31.54■■■□□ 2.64
SEMA3B-205ENST00000434030 NUTM2GQ5VZR2 741 aa31.54■■■□□ 2.64
SEMA3B-205ENST00000434030 CARD11Q9BXL7 1154 aa31.54■■■□□ 2.64
SEMA3B-205ENST00000434030 BRWD3Q6RI45 1802 aa31.52■■■□□ 2.64
SEMA3B-205ENST00000434030 ABTB2Q8N961 1025 aa31.51■■■□□ 2.63
SEMA3B-205ENST00000434030 BTG4Q9NY30 223 aa31.51■■■□□ 2.63
SEMA3B-205ENST00000434030 ATAD2Q6PL18 1390 aa31.48■■■□□ 2.63
SEMA3B-205ENST00000434030 BRD4O60885 1362 aaPredicted RBP31.47■■■□□ 2.63
SEMA3B-205ENST00000434030 CCDC9Q9Y3X0 531 aaKnown RBP31.47■■■□□ 2.63
SEMA3B-205ENST00000434030 AKAP12Q02952 1782 aa31.47■■■□□ 2.63
SEMA3B-205ENST00000434030 SBNO2Q9Y2G9 1366 aa31.46■■■□□ 2.63
SEMA3B-205ENST00000434030 PRDM11Q9NQV5 511 aa31.46■■■□□ 2.63
SEMA3B-205ENST00000434030 USP6P35125 1406 aa31.46■■■□□ 2.63
SEMA3B-205ENST00000434030 KIAA0232Q92628 1395 aa31.44■■■□□ 2.62
SEMA3B-205ENST00000434030 ZC3H6P61129 1189 aaKnown RBP31.43■■■□□ 2.62
SEMA3B-205ENST00000434030 NRKQ7Z2Y5 1582 aa31.43■■■□□ 2.62
SEMA3B-205ENST00000434030 ONECUT3O60422 494 aaPredicted RBP31.42■■■□□ 2.62
SEMA3B-205ENST00000434030 NLRP13Q86W25 1043 aa31.42■■■□□ 2.62
SEMA3B-205ENST00000434030 CHRNA2Q15822 529 aa31.41■■■□□ 2.62
SEMA3B-205ENST00000434030 USP19O94966 1318 aa31.41■■■□□ 2.62
SEMA3B-205ENST00000434030 SEPT12Q8IYM1 358 aa31.4■■■□□ 2.62
SEMA3B-205ENST00000434030 SSH2Q76I76 1423 aa31.4■■■□□ 2.62
SEMA3B-205ENST00000434030 ZNF692Q9BU19 519 aaPredicted RBP31.38■■■□□ 2.61
SEMA3B-205ENST00000434030 PIK3C2AO00443 1686 aa31.37■■■□□ 2.61
SEMA3B-205ENST00000434030 EP400Q96L91 3159 aa31.36■■■□□ 2.61
SEMA3B-205ENST00000434030 GCP02774 474 aa31.35■■■□□ 2.61
SEMA3B-205ENST00000434030 NLRP6P59044 892 aa31.35■■■□□ 2.61
SEMA3B-205ENST00000434030 PCGF6Q9BYE7 350 aa31.35■■■□□ 2.61
SEMA3B-205ENST00000434030 CPSF1Q10570 1443 aaKnown RBP31.34■■■□□ 2.61
SEMA3B-205ENST00000434030 SPATA31A5Q5VU36 1347 aa31.34■■■□□ 2.61
SEMA3B-205ENST00000434030 SPATA31A7Q8IWB4 1347 aa31.34■■■□□ 2.61
SEMA3B-205ENST00000434030 CPDO75976 1380 aa31.33■■■□□ 2.61
SEMA3B-205ENST00000434030 MON2Q7Z3U7 1717 aa31.33■■■□□ 2.61
SEMA3B-205ENST00000434030 FAM98CQ17RN3 349 aaKnown RBP31.33■■■□□ 2.61
SEMA3B-205ENST00000434030 LMO7Q8WWI1 1683 aa31.32■■■□□ 2.6
SEMA3B-205ENST00000434030 TTC21BQ7Z4L5 1316 aa31.31■■■□□ 2.6
SEMA3B-205ENST00000434030 SLIT3O75094 1523 aa31.3■■■□□ 2.6
SEMA3B-205ENST00000434030 CAMTA1Q9Y6Y1 1673 aa31.3■■■□□ 2.6
SEMA3B-205ENST00000434030 STRN4Q9NRL3 753 aa31.3■■■□□ 2.6
SEMA3B-205ENST00000434030 ST20-MTHFSA0A0A6YYL1 179 aa31.29■■■□□ 2.6
SEMA3B-205ENST00000434030 KTN1Q86UP2 1357 aaKnown RBP31.29■■■□□ 2.6
SEMA3B-205ENST00000434030 A0A0G2JS52 829 aa31.28■■■□□ 2.6
SEMA3B-205ENST00000434030 MYT1Q01538 1121 aa31.28■■■□□ 2.6
SEMA3B-205ENST00000434030 KRT27Q7Z3Y8 459 aa31.28■■■□□ 2.6
SEMA3B-205ENST00000434030 CCDC125Q86Z20 511 aa31.28■■■□□ 2.6
SEMA3B-205ENST00000434030 CLSPNQ9HAW4 1339 aa31.27■■■□□ 2.6
SEMA3B-205ENST00000434030 TESK2Q96S53 571 aa31.27■■■□□ 2.6
SEMA3B-205ENST00000434030 SPATA31A1Q5TZJ5 1347 aa31.26■■■□□ 2.6
SEMA3B-205ENST00000434030 TTC21AQ8NDW8 1320 aa31.26■■■□□ 2.6
SEMA3B-205ENST00000434030 EVA1CP58658 441 aa31.26■■■□□ 2.59
SEMA3B-205ENST00000434030 PUS7Q96PZ0 661 aaKnown RBP31.25■■■□□ 2.59
SEMA3B-205ENST00000434030 CD163L1Q9NR16 1453 aa31.25■■■□□ 2.59
SEMA3B-205ENST00000434030 THSD7AQ9UPZ6 1657 aa31.25■■■□□ 2.59
SEMA3B-205ENST00000434030 TMC1Q8TDI8 760 aa31.24■■■□□ 2.59
SEMA3B-205ENST00000434030 TIMELESSQ9UNS1 1208 aa31.24■■■□□ 2.59
SEMA3B-205ENST00000434030 SLC12A5Q9H2X9 1139 aa31.23■■■□□ 2.59
SEMA3B-205ENST00000434030 COL18A1P39060 1754 aa31.22■■■□□ 2.59
SEMA3B-205ENST00000434030 RGPD5Q99666 1765 aa31.2■■■□□ 2.59
SEMA3B-205ENST00000434030 LARP1Q6PKG0 1096 aaKnown RBP31.2■■■□□ 2.59
SEMA3B-205ENST00000434030 ZBTB7CA1YPR0 619 aa31.19■■■□□ 2.58
SEMA3B-205ENST00000434030 SLC24A1O60721 1099 aa31.19■■■□□ 2.58
SEMA3B-205ENST00000434030 USP35Q9P2H5 1018 aa31.19■■■□□ 2.58
SEMA3B-205ENST00000434030 BLMP54132 1417 aaPredicted RBP31.18■■■□□ 2.58
SEMA3B-205ENST00000434030 HDGFL2Q7Z4V5 671 aaPredicted RBP31.18■■■□□ 2.58
SEMA3B-205ENST00000434030 COL5A2P05997 1499 aaPredicted RBP31.18■■■□□ 2.58
SEMA3B-205ENST00000434030 AATKQ6ZMQ8 1374 aa31.17■■■□□ 2.58
SEMA3B-205ENST00000434030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.17■■■□□ 2.58
SEMA3B-205ENST00000434030 KCNH5Q8NCM2 988 aa31.17■■■□□ 2.58
SEMA3B-205ENST00000434030 USP47Q96K76 1375 aa31.17■■■□□ 2.58
SEMA3B-205ENST00000434030 USP54Q70EL1 1684 aa31.16■■■□□ 2.58
SEMA3B-205ENST00000434030 BARGINQ6ZT62 677 aa31.14■■■□□ 2.58
SEMA3B-205ENST00000434030 TERF2IPQ9NYB0 399 aa31.14■■■□□ 2.58
SEMA3B-205ENST00000434030 ZRANB1Q9UGI0 708 aa31.14■■■□□ 2.58
SEMA3B-205ENST00000434030 ARHGEF25Q86VW2 580 aa31.13■■■□□ 2.57
SEMA3B-205ENST00000434030 A0A1W2PP64 1363 aa31.13■■■□□ 2.57
SEMA3B-205ENST00000434030 SOX12O15370 315 aa31.12■■■□□ 2.57
SEMA3B-205ENST00000434030 USP31Q70CQ4 1352 aa31.12■■■□□ 2.57
SEMA3B-205ENST00000434030 NFAT5O94916 1531 aa31.12■■■□□ 2.57
SEMA3B-205ENST00000434030 FAM182BQ5T319 152 aa31.11■■■□□ 2.57
SEMA3B-205ENST00000434030 EDC4Q6P2E9 1401 aaKnown RBP31.11■■■□□ 2.57
SEMA3B-205ENST00000434030 NME9Q86XW9 330 aa31.11■■■□□ 2.57
SEMA3B-205ENST00000434030 TCP11L2Q8N4U5 519 aa31.11■■■□□ 2.57
SEMA3B-205ENST00000434030 AXIN2Q9Y2T1 843 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms