RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.71■□□□□ 0.1
CTCFL-209ENST00000433949 TERF2IPQ9NYB0 399 aa15.71■□□□□ 0.1
CTCFL-209ENST00000433949 ADGRL3Q9HAR2 1447 aa15.7■□□□□ 0.1
CTCFL-209ENST00000433949 A0A1W2PP64 1363 aa15.7■□□□□ 0.1
CTCFL-209ENST00000433949 ATF3P18847 181 aa15.7■□□□□ 0.1
CTCFL-209ENST00000433949 HDGFL2Q7Z4V5 671 aaPredicted RBP15.7■□□□□ 0.1
CTCFL-209ENST00000433949 NKTRP30414 1462 aaKnown RBP15.7■□□□□ 0.1
CTCFL-209ENST00000433949 NALCNQ8IZF0 1738 aa15.69■□□□□ 0.1
CTCFL-209ENST00000433949 ORAI2Q96SN7 254 aa15.69■□□□□ 0.1
CTCFL-209ENST00000433949 ATP7BP35670 1465 aa15.69■□□□□ 0.1
CTCFL-209ENST00000433949 NGDNQ8NEJ9 315 aaKnown RBP15.68■□□□□ 0.1
CTCFL-209ENST00000433949 CFAP53Q96M91 514 aa15.68■□□□□ 0.1
CTCFL-209ENST00000433949 ACEP12821 1306 aa15.68■□□□□ 0.1
CTCFL-209ENST00000433949 RBM19Q9Y4C8 960 aaKnown RBP15.68■□□□□ 0.1
CTCFL-209ENST00000433949 TNNT2P45379 298 aaPredicted RBP15.67■□□□□ 0.1
CTCFL-209ENST00000433949 ADGRB2O60241 1585 aa15.67■□□□□ 0.1
CTCFL-209ENST00000433949 DUSP27Q5VZP5 1158 aa15.67■□□□□ 0.1
CTCFL-209ENST00000433949 LRRC7Q96NW7 1537 aa15.67■□□□□ 0.1
CTCFL-209ENST00000433949 MSH6P52701 1360 aa15.66■□□□□ 0.1
CTCFL-209ENST00000433949 CD163L1Q9NR16 1453 aa15.66■□□□□ 0.1
CTCFL-209ENST00000433949 KIF20BQ96Q89 1820 aa15.65■□□□□ 0.1
CTCFL-209ENST00000433949 APAF1O14727 1248 aa15.65■□□□□ 0.1
CTCFL-209ENST00000433949 XPCQ01831 940 aaPredicted RBP15.65■□□□□ 0.1
CTCFL-209ENST00000433949 GGNBP2Q9H3C7 697 aa15.65■□□□□ 0.1
CTCFL-209ENST00000433949 SLFN5Q08AF3 891 aa15.64■□□□□ 0.09
CTCFL-209ENST00000433949 RGPD8O14715 1765 aaPredicted RBP15.64■□□□□ 0.09
CTCFL-209ENST00000433949 PLEKHG3A1L390 1219 aa15.64■□□□□ 0.09
CTCFL-209ENST00000433949 FOXO3O43524 673 aa15.64■□□□□ 0.09
CTCFL-209ENST00000433949 CADPS2Q86UW7 1296 aa15.64■□□□□ 0.09
CTCFL-209ENST00000433949 CCDC146Q8IYE0 955 aa15.64■□□□□ 0.09
CTCFL-209ENST00000433949 TRMT2AQ8IZ69 625 aaKnown RBP15.64■□□□□ 0.09
CTCFL-209ENST00000433949 PHF8Q9UPP1 1060 aa15.64■□□□□ 0.09
CTCFL-209ENST00000433949 E9PSI1 815 aa15.63■□□□□ 0.09
CTCFL-209ENST00000433949 PLEKHG5O94827 1062 aa15.63■□□□□ 0.09
CTCFL-209ENST00000433949 MTHFSP49914 203 aa15.63■□□□□ 0.09
CTCFL-209ENST00000433949 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
CTCFL-209ENST00000433949 DDX17Q92841 729 aaKnown RBP15.63■□□□□ 0.09
CTCFL-209ENST00000433949 PAK3O75914 559 aaPredicted RBP15.63■□□□□ 0.09
CTCFL-209ENST00000433949 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.62■□□□□ 0.09
CTCFL-209ENST00000433949 RUNDC1Q96C34 613 aa15.62■□□□□ 0.09
CTCFL-209ENST00000433949 ZRANB1Q9UGI0 708 aa15.62■□□□□ 0.09
CTCFL-209ENST00000433949 CDC42BPGQ6DT37 1551 aa15.62■□□□□ 0.09
CTCFL-209ENST00000433949 NME9Q86XW9 330 aa15.62■□□□□ 0.09
CTCFL-209ENST00000433949 FYB1O15117 783 aa15.61■□□□□ 0.09
CTCFL-209ENST00000433949 PSME1Q06323 249 aa15.61■□□□□ 0.09
CTCFL-209ENST00000433949 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
CTCFL-209ENST00000433949 NUTM2GQ5VZR2 741 aa15.6■□□□□ 0.09
CTCFL-209ENST00000433949 FMN2Q9NZ56 1722 aa15.6■□□□□ 0.09
CTCFL-209ENST00000433949 CPSF1Q10570 1443 aaKnown RBP15.6■□□□□ 0.09
CTCFL-209ENST00000433949 ANKARQ7Z5J8 1434 aa15.6■□□□□ 0.09
CTCFL-209ENST00000433949 IQSEC2Q5JU85 1478 aa15.6■□□□□ 0.09
CTCFL-209ENST00000433949 EXOC6Q8TAG9 804 aa15.6■□□□□ 0.09
CTCFL-209ENST00000433949 SLAIN2Q9P270 581 aa15.6■□□□□ 0.09
CTCFL-209ENST00000433949 FBLN1P23142 703 aa15.59■□□□□ 0.09
CTCFL-209ENST00000433949 C1orf167Q5SNV9 1468 aa15.59■□□□□ 0.09
CTCFL-209ENST00000433949 NCOA3Q9Y6Q9 1424 aa15.59■□□□□ 0.09
CTCFL-209ENST00000433949 XIRP1Q702N8 1843 aaKnown RBP15.58■□□□□ 0.08
CTCFL-209ENST00000433949 SOX12O15370 315 aa15.58■□□□□ 0.08
CTCFL-209ENST00000433949 MST1RQ04912 1400 aa15.58■□□□□ 0.08
CTCFL-209ENST00000433949 LMOD2Q6P5Q4 547 aa15.58■□□□□ 0.08
CTCFL-209ENST00000433949 TTC21BQ7Z4L5 1316 aa15.57■□□□□ 0.08
CTCFL-209ENST00000433949 CCDC27Q2M243 656 aa15.57■□□□□ 0.08
CTCFL-209ENST00000433949 WWC1Q8IX03 1113 aa15.57■□□□□ 0.08
CTCFL-209ENST00000433949 USP6P35125 1406 aa15.56■□□□□ 0.08
CTCFL-209ENST00000433949 TOPAZ1Q8N9V7 1692 aa15.55■□□□□ 0.08
CTCFL-209ENST00000433949 PHF23Q9BUL5 403 aaPredicted RBP15.55■□□□□ 0.08
CTCFL-209ENST00000433949 EDC4Q6P2E9 1401 aaKnown RBP15.55■□□□□ 0.08
CTCFL-209ENST00000433949 FANCIQ9NVI1 1328 aa15.55■□□□□ 0.08
CTCFL-209ENST00000433949 BRINP3Q76B58 766 aa15.55■□□□□ 0.08
CTCFL-209ENST00000433949 WDR63Q8IWG1 891 aa15.55■□□□□ 0.08
CTCFL-209ENST00000433949 TCP11L2Q8N4U5 519 aa15.55■□□□□ 0.08
CTCFL-209ENST00000433949 LTBP4Q8N2S1 1624 aa15.54■□□□□ 0.08
CTCFL-209ENST00000433949 ABTB2Q8N961 1025 aa15.54■□□□□ 0.08
CTCFL-209ENST00000433949 DCCP43146 1447 aa15.54■□□□□ 0.08
CTCFL-209ENST00000433949 COL3A1P02461 1466 aaPredicted RBP15.54■□□□□ 0.08
CTCFL-209ENST00000433949 PLIN1O60240 522 aa15.53■□□□□ 0.08
CTCFL-209ENST00000433949 KRT28Q7Z3Y7 464 aa15.53■□□□□ 0.08
CTCFL-209ENST00000433949 ITSN1Q15811 1721 aa15.53■□□□□ 0.08
CTCFL-209ENST00000433949 MON2Q7Z3U7 1717 aa15.53■□□□□ 0.08
CTCFL-209ENST00000433949 COG3Q96JB2 828 aa15.53■□□□□ 0.08
CTCFL-209ENST00000433949 MAP2P11137 1827 aaKnown RBP15.53■□□□□ 0.08
CTCFL-209ENST00000433949 AKAP12Q02952 1782 aa15.53■□□□□ 0.08
CTCFL-209ENST00000433949 PPM1GO15355 546 aaPredicted RBP15.52■□□□□ 0.08
CTCFL-209ENST00000433949 U2AF1L5P0DN76 240 aaPredicted RBP15.52■□□□□ 0.08
CTCFL-209ENST00000433949 NLRP6P59044 892 aa15.52■□□□□ 0.08
CTCFL-209ENST00000433949 PIP4K2BP78356 416 aa15.52■□□□□ 0.08
CTCFL-209ENST00000433949 U2AF1Q01081 240 aaKnown RBP eCLIP15.52■□□□□ 0.08
CTCFL-209ENST00000433949 PNNQ9H307 717 aaKnown RBP15.52■□□□□ 0.08
CTCFL-209ENST00000433949 CRBNQ96SW2 442 aa15.52■□□□□ 0.07
CTCFL-209ENST00000433949 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.07
CTCFL-209ENST00000433949 PNPLA6Q8IY17 1366 aa15.52■□□□□ 0.07
CTCFL-209ENST00000433949 RRS1Q15050 365 aaKnown RBP15.49■□□□□ 0.07
CTCFL-209ENST00000433949 SSH2Q76I76 1423 aa15.49■□□□□ 0.07
CTCFL-209ENST00000433949 TCERG1O14776 1098 aaKnown RBP15.48■□□□□ 0.07
CTCFL-209ENST00000433949 DIAPH1O60610 1272 aaKnown RBP15.48■□□□□ 0.07
CTCFL-209ENST00000433949 MYH16Q9H6N6 1097 aa15.48■□□□□ 0.07
CTCFL-209ENST00000433949 NPHP3Q7Z494 1330 aa15.47■□□□□ 0.07
CTCFL-209ENST00000433949 TTC21AQ8NDW8 1320 aa15.47■□□□□ 0.07
CTCFL-209ENST00000433949 UBAP1LF5GYI3 381 aa15.47■□□□□ 0.07
CTCFL-209ENST00000433949 NEUROD2Q15784 382 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms