RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 MYO5CQ9NQX4 1742 aa10.36□□□□□ -0.75
COL17A1-204ENST00000433822 TSPY4P0CV99 314 aa10.35□□□□□ -0.75
COL17A1-204ENST00000433822 TSPY10P0CW01 314 aa10.35□□□□□ -0.75
COL17A1-204ENST00000433822 HSPA5P11021 654 aaKnown RBP10.35□□□□□ -0.75
COL17A1-204ENST00000433822 PPP4CP60510 307 aa10.35□□□□□ -0.75
COL17A1-204ENST00000433822 EN1Q05925 392 aaPredicted RBP10.35□□□□□ -0.75
COL17A1-204ENST00000433822 MAP3K7O43318 606 aa10.34□□□□□ -0.75
COL17A1-204ENST00000433822 HSPA2P54652 639 aa10.34□□□□□ -0.75
COL17A1-204ENST00000433822 NBR1Q14596 966 aa10.34□□□□□ -0.75
COL17A1-204ENST00000433822 TSKSQ9UJT2 592 aa10.34□□□□□ -0.75
COL17A1-204ENST00000433822 KIF15Q9NS87 1388 aa10.34□□□□□ -0.75
COL17A1-204ENST00000433822 RALGAPBQ86X10 1494 aa10.34□□□□□ -0.75
COL17A1-204ENST00000433822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.33□□□□□ -0.76
COL17A1-204ENST00000433822 ARID3CA6NKF2 412 aa10.33□□□□□ -0.76
COL17A1-204ENST00000433822 CCDC7Q96M83 1385 aa10.33□□□□□ -0.76
COL17A1-204ENST00000433822 MAGI2Q86UL8 1455 aa10.33□□□□□ -0.76
COL17A1-204ENST00000433822 WASHC2AQ641Q2 1341 aa10.33□□□□□ -0.76
COL17A1-204ENST00000433822 TSR1Q2NL82 804 aaKnown RBP10.32□□□□□ -0.76
COL17A1-204ENST00000433822 TTC37Q6PGP7 1564 aa10.31□□□□□ -0.76
COL17A1-204ENST00000433822 ATP10AO60312 1499 aa10.31□□□□□ -0.76
COL17A1-204ENST00000433822 PDIA6Q15084 440 aa10.31□□□□□ -0.76
COL17A1-204ENST00000433822 IQGAP3Q86VI3 1631 aa10.31□□□□□ -0.76
COL17A1-204ENST00000433822 ERBINQ96RT1 1412 aa10.31□□□□□ -0.76
COL17A1-204ENST00000433822 ROCK2O75116 1388 aaKnown RBP10.3□□□□□ -0.76
COL17A1-204ENST00000433822 LAMC1P11047 1609 aa10.3□□□□□ -0.76
COL17A1-204ENST00000433822 DUOX2Q9NRD8 1548 aa10.3□□□□□ -0.76
COL17A1-204ENST00000433822 SPDYE16A6NNV3 312 aaPredicted RBP10.3□□□□□ -0.76
COL17A1-204ENST00000433822 PLCH2O75038 1416 aa10.3□□□□□ -0.76
COL17A1-204ENST00000433822 KDM5CP41229 1560 aa10.3□□□□□ -0.76
COL17A1-204ENST00000433822 WDR7Q9Y4E6 1490 aa10.3□□□□□ -0.76
COL17A1-204ENST00000433822 NUP155O75694 1391 aa10.29□□□□□ -0.76
COL17A1-204ENST00000433822 ARHGAP5Q13017 1502 aa10.29□□□□□ -0.76
COL17A1-204ENST00000433822 FAM135AQ9P2D6 1515 aa10.29□□□□□ -0.76
COL17A1-204ENST00000433822 NBPF8Q3BBV2 869 aa10.29□□□□□ -0.76
COL17A1-204ENST00000433822 SYCP2Q9BX26 1530 aa10.28□□□□□ -0.76
COL17A1-204ENST00000433822 SIGLEC1Q9BZZ2 1709 aa10.28□□□□□ -0.76
COL17A1-204ENST00000433822 RTEL1-TNFRSF6BF6WH68 1400 aa10.28□□□□□ -0.76
COL17A1-204ENST00000433822 GFRA3O60609 400 aa10.28□□□□□ -0.76
COL17A1-204ENST00000433822 TJAP1Q5JTD0 557 aa10.28□□□□□ -0.76
COL17A1-204ENST00000433822 SAMD7Q7Z3H4 446 aa10.28□□□□□ -0.76
COL17A1-204ENST00000433822 CDCA7LQ96GN5 454 aa10.28□□□□□ -0.76
COL17A1-204ENST00000433822 SUPT16HQ9Y5B9 1047 aaKnown RBP10.28□□□□□ -0.76
COL17A1-204ENST00000433822 ABCC1P33527 1531 aa10.28□□□□□ -0.76
COL17A1-204ENST00000433822 PRSS12P56730 875 aa10.27□□□□□ -0.77
COL17A1-204ENST00000433822 ZNF777Q9ULD5 760 aaPredicted RBP10.27□□□□□ -0.77
COL17A1-204ENST00000433822 FRMPD1Q5SYB0 1578 aa10.26□□□□□ -0.77
COL17A1-204ENST00000433822 STRCQ7RTU9 1775 aa10.26□□□□□ -0.77
COL17A1-204ENST00000433822 CD109Q6YHK3 1445 aa10.26□□□□□ -0.77
COL17A1-204ENST00000433822 TRAF7Q6Q0C0 670 aa10.26□□□□□ -0.77
COL17A1-204ENST00000433822 KTN1Q86UP2 1357 aaKnown RBP10.26□□□□□ -0.77
COL17A1-204ENST00000433822 SMAPO00193 183 aa10.25□□□□□ -0.77
COL17A1-204ENST00000433822 IL21Q9HBE4 155 aa10.25□□□□□ -0.77
COL17A1-204ENST00000433822 NEURL4Q96JN8 1562 aa10.25□□□□□ -0.77
COL17A1-204ENST00000433822 EIF2AK4Q9P2K8 1649 aaKnown RBP10.25□□□□□ -0.77
COL17A1-204ENST00000433822 USP47Q96K76 1375 aa10.25□□□□□ -0.77
COL17A1-204ENST00000433822 NBPF26B4DH59 902 aa10.24□□□□□ -0.77
COL17A1-204ENST00000433822 HIRIP3Q9BW71 556 aaPredicted RBP10.24□□□□□ -0.77
COL17A1-204ENST00000433822 PRKD2Q9BZL6 878 aa10.24□□□□□ -0.77
COL17A1-204ENST00000433822 KIF7Q2M1P5 1343 aa10.24□□□□□ -0.77
COL17A1-204ENST00000433822 GPRASP1Q5JY77 1395 aa10.24□□□□□ -0.77
COL17A1-204ENST00000433822 HNRNPMP52272 730 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL17A1-204ENST00000433822 ERICH6BQ5W0A0 696 aa10.23□□□□□ -0.77
COL17A1-204ENST00000433822 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
COL17A1-204ENST00000433822 TATDN2Q93075 761 aa10.23□□□□□ -0.77
COL17A1-204ENST00000433822 MTRQ99707 1265 aa10.23□□□□□ -0.77
COL17A1-204ENST00000433822 PRKRIP1Q9H875 184 aaPredicted RBP10.23□□□□□ -0.77
COL17A1-204ENST00000433822 TRPM1Q7Z4N2 1603 aa10.22□□□□□ -0.77
COL17A1-204ENST00000433822 HDGFP51858 240 aaKnown RBP10.22□□□□□ -0.77
COL17A1-204ENST00000433822 EFCAB2Q5VUJ9 269 aa10.22□□□□□ -0.77
COL17A1-204ENST00000433822 FAM198AQ9UFP1 575 aa10.22□□□□□ -0.77
COL17A1-204ENST00000433822 PNMA3Q9UL41 463 aa10.22□□□□□ -0.77
COL17A1-204ENST00000433822 V9GY48 417 aaPredicted RBP10.22□□□□□ -0.77
COL17A1-204ENST00000433822 CCDC144AA2RUR9 1427 aa10.22□□□□□ -0.77
COL17A1-204ENST00000433822 DEPDC5O75140 1603 aa10.22□□□□□ -0.77
COL17A1-204ENST00000433822 ABCA9Q8IUA7 1624 aa10.22□□□□□ -0.77
COL17A1-204ENST00000433822 NRG2O14511 850 aaPredicted RBP10.21□□□□□ -0.77
COL17A1-204ENST00000433822 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
COL17A1-204ENST00000433822 FER1L4A9Z1Z3 1794 aa10.21□□□□□ -0.78
COL17A1-204ENST00000433822 E9PCH4 1651 aa10.2□□□□□ -0.78
COL17A1-204ENST00000433822 DHX29Q7Z478 1369 aaKnown RBP10.2□□□□□ -0.78
COL17A1-204ENST00000433822 PRAG1Q86YV5 1406 aa10.2□□□□□ -0.78
COL17A1-204ENST00000433822 ARHGEF40Q8TER5 1519 aa10.19□□□□□ -0.78
COL17A1-204ENST00000433822 PLA2R1Q13018 1463 aa10.19□□□□□ -0.78
COL17A1-204ENST00000433822 GRXCR2A6NFK2 248 aa10.19□□□□□ -0.78
COL17A1-204ENST00000433822 C11orf95C9JLR9 678 aaPredicted RBP10.19□□□□□ -0.78
COL17A1-204ENST00000433822 LCE2BO14633 110 aa10.19□□□□□ -0.78
COL17A1-204ENST00000433822 E2F4Q16254 413 aa10.19□□□□□ -0.78
COL17A1-204ENST00000433822 ARIH1Q9Y4X5 557 aaPredicted RBP10.19□□□□□ -0.78
COL17A1-204ENST00000433822 PREX1Q8TCU6 1659 aa10.18□□□□□ -0.78
COL17A1-204ENST00000433822 VWDEQ8N2E2 1590 aa10.18□□□□□ -0.78
COL17A1-204ENST00000433822 INO80Q9ULG1 1556 aaPredicted RBP10.18□□□□□ -0.78
COL17A1-204ENST00000433822 ZFYVE16Q7Z3T8 1539 aa10.18□□□□□ -0.78
COL17A1-204ENST00000433822 C3orf80F5H4A9 247 aa10.18□□□□□ -0.78
COL17A1-204ENST00000433822 NEFLP07196 543 aa10.18□□□□□ -0.78
COL17A1-204ENST00000433822 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.18□□□□□ -0.78
COL17A1-204ENST00000433822 RNF17Q9BXT8 1623 aaKnown RBP10.18□□□□□ -0.78
COL17A1-204ENST00000433822 PRDM15P57071 1507 aaPredicted RBP10.17□□□□□ -0.78
COL17A1-204ENST00000433822 ZBED9Q6R2W3 1325 aa10.17□□□□□ -0.78
COL17A1-204ENST00000433822 RAPGEF3O95398 923 aa10.17□□□□□ -0.78
COL17A1-204ENST00000433822 PRIM1P49642 420 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms