RNA–Protein interactions for RNA: ENST00000433382.5

TRAPPC12-207, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-207ENST00000433382 SLIT2O94813 1529 aa17.66■□□□□ 0.42
TRAPPC12-207ENST00000433382 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
TRAPPC12-207ENST00000433382 RGPD5Q99666 1765 aa17.65■□□□□ 0.42
TRAPPC12-207ENST00000433382 SRPK2P78362 688 aaKnown RBP17.64■□□□□ 0.41
TRAPPC12-207ENST00000433382 MEX3CQ5U5Q3 659 aaKnown RBP17.64■□□□□ 0.41
TRAPPC12-207ENST00000433382 FNBP4Q8N3X1 1017 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC12-207ENST00000433382 MYOM1P52179 1685 aa17.64■□□□□ 0.41
TRAPPC12-207ENST00000433382 USP54Q70EL1 1684 aa17.64■□□□□ 0.41
TRAPPC12-207ENST00000433382 SOCS7O14512 581 aa17.63■□□□□ 0.41
TRAPPC12-207ENST00000433382 NGDNQ8NEJ9 315 aaKnown RBP17.63■□□□□ 0.41
TRAPPC12-207ENST00000433382 CABP1Q9NZU7 370 aa17.63■□□□□ 0.41
TRAPPC12-207ENST00000433382 EVC2Q86UK5 1308 aa17.63■□□□□ 0.41
TRAPPC12-207ENST00000433382 COL14A1Q05707 1796 aaKnown RBP17.63■□□□□ 0.41
TRAPPC12-207ENST00000433382 GLI3P10071 1580 aa17.62■□□□□ 0.41
TRAPPC12-207ENST00000433382 COL18A1P39060 1754 aa17.62■□□□□ 0.41
TRAPPC12-207ENST00000433382 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
TRAPPC12-207ENST00000433382 ARHGEF10O15013 1369 aa17.62■□□□□ 0.41
TRAPPC12-207ENST00000433382 USP6P35125 1406 aa17.62■□□□□ 0.41
TRAPPC12-207ENST00000433382 CPSF1Q10570 1443 aaKnown RBP17.62■□□□□ 0.41
TRAPPC12-207ENST00000433382 ST20-MTHFSA0A0A6YYL1 179 aa17.61■□□□□ 0.41
TRAPPC12-207ENST00000433382 ATRNO75882 1429 aa17.61■□□□□ 0.41
TRAPPC12-207ENST00000433382 LMO7Q8WWI1 1683 aa17.61■□□□□ 0.41
TRAPPC12-207ENST00000433382 ZNF772Q68DY9 489 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC12-207ENST00000433382 USP47Q96K76 1375 aa17.58■□□□□ 0.4
TRAPPC12-207ENST00000433382 NGLY1Q96IV0 654 aa17.58■□□□□ 0.4
TRAPPC12-207ENST00000433382 SLIT3O75094 1523 aa17.57■□□□□ 0.4
TRAPPC12-207ENST00000433382 FAM83GA6ND36 823 aa17.57■□□□□ 0.4
TRAPPC12-207ENST00000433382 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
TRAPPC12-207ENST00000433382 ZEB1P37275 1124 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC12-207ENST00000433382 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC12-207ENST00000433382 RGS12O14924 1447 aa17.56■□□□□ 0.4
TRAPPC12-207ENST00000433382 USP19O94966 1318 aa17.56■□□□□ 0.4
TRAPPC12-207ENST00000433382 NUTM2GQ5VZR2 741 aa17.56■□□□□ 0.4
TRAPPC12-207ENST00000433382 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
TRAPPC12-207ENST00000433382 QTRT2Q9H974 415 aaKnown RBP17.56■□□□□ 0.4
TRAPPC12-207ENST00000433382 ATAD2Q6PL18 1390 aa17.55■□□□□ 0.4
TRAPPC12-207ENST00000433382 USP21Q9UK80 565 aa17.55■□□□□ 0.4
TRAPPC12-207ENST00000433382 LTN1O94822 1766 aa17.54■□□□□ 0.4
TRAPPC12-207ENST00000433382 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC12-207ENST00000433382 SLC12A5Q9H2X9 1139 aa17.53■□□□□ 0.4
TRAPPC12-207ENST00000433382 EP400Q96L91 3159 aa17.53■□□□□ 0.4
TRAPPC12-207ENST00000433382 BRD4O60885 1362 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC12-207ENST00000433382 CAMTA1Q9Y6Y1 1673 aa17.52■□□□□ 0.39
TRAPPC12-207ENST00000433382 PUS7Q96PZ0 661 aaKnown RBP17.51■□□□□ 0.39
TRAPPC12-207ENST00000433382 NFAT5O94916 1531 aa17.51■□□□□ 0.39
TRAPPC12-207ENST00000433382 TTC21BQ7Z4L5 1316 aa17.5■□□□□ 0.39
TRAPPC12-207ENST00000433382 RXRBP28702 533 aa17.5■□□□□ 0.39
TRAPPC12-207ENST00000433382 RBM6P78332 1123 aaKnown RBP17.5■□□□□ 0.39
TRAPPC12-207ENST00000433382 UNC5CLQ8IV45 518 aa17.5■□□□□ 0.39
TRAPPC12-207ENST00000433382 KIAA0232Q92628 1395 aa17.5■□□□□ 0.39
TRAPPC12-207ENST00000433382 KIF20BQ96Q89 1820 aa17.49■□□□□ 0.39
TRAPPC12-207ENST00000433382 WNK3Q9BYP7 1800 aa17.49■□□□□ 0.39
TRAPPC12-207ENST00000433382 ABTB2Q8N961 1025 aa17.49■□□□□ 0.39
TRAPPC12-207ENST00000433382 ZRANB1Q9UGI0 708 aa17.49■□□□□ 0.39
TRAPPC12-207ENST00000433382 A0A1W2PP64 1363 aa17.49■□□□□ 0.39
TRAPPC12-207ENST00000433382 TRPC5Q9UL62 973 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC12-207ENST00000433382 THSD7AQ9UPZ6 1657 aa17.48■□□□□ 0.39
TRAPPC12-207ENST00000433382 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-207ENST00000433382 KTN1Q86UP2 1357 aaKnown RBP17.47■□□□□ 0.39
TRAPPC12-207ENST00000433382 CPDO75976 1380 aa17.46■□□□□ 0.39
TRAPPC12-207ENST00000433382 GJD4Q96KN9 370 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC12-207ENST00000433382 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
TRAPPC12-207ENST00000433382 ZC3H6P61129 1189 aaKnown RBP17.45■□□□□ 0.38
TRAPPC12-207ENST00000433382 CHRNA2Q15822 529 aa17.45■□□□□ 0.38
TRAPPC12-207ENST00000433382 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
TRAPPC12-207ENST00000433382 GCP02774 474 aa17.44■□□□□ 0.38
TRAPPC12-207ENST00000433382 VPS72Q15906 364 aa17.44■□□□□ 0.38
TRAPPC12-207ENST00000433382 BTG4Q9NY30 223 aa17.44■□□□□ 0.38
TRAPPC12-207ENST00000433382 HAP1P54257 671 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC12-207ENST00000433382 NLRP6P59044 892 aa17.43■□□□□ 0.38
TRAPPC12-207ENST00000433382 NLRP13Q86W25 1043 aa17.43■□□□□ 0.38
TRAPPC12-207ENST00000433382 EDC4Q6P2E9 1401 aaKnown RBP17.43■□□□□ 0.38
TRAPPC12-207ENST00000433382 TTC21AQ8NDW8 1320 aa17.43■□□□□ 0.38
TRAPPC12-207ENST00000433382 OVOS2A0A0J9YW53 1432 aa17.42■□□□□ 0.38
TRAPPC12-207ENST00000433382 OVOS2Q6IE36 1432 aa17.42■□□□□ 0.38
TRAPPC12-207ENST00000433382 HSPA5P11021 654 aaKnown RBP17.42■□□□□ 0.38
TRAPPC12-207ENST00000433382 NME9Q86XW9 330 aa17.42■□□□□ 0.38
TRAPPC12-207ENST00000433382 TMC1Q8TDI8 760 aa17.42■□□□□ 0.38
TRAPPC12-207ENST00000433382 ONECUT3O60422 494 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC12-207ENST00000433382 MAP2P11137 1827 aaKnown RBP17.41■□□□□ 0.38
TRAPPC12-207ENST00000433382 COL5A2P05997 1499 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC12-207ENST00000433382 C11orf95C9JLR9 678 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC12-207ENST00000433382 TMF1P82094 1093 aa17.4■□□□□ 0.38
TRAPPC12-207ENST00000433382 PRDM11Q9NQV5 511 aa17.4■□□□□ 0.38
TRAPPC12-207ENST00000433382 ANKRD26Q9UPS8 1709 aa17.4■□□□□ 0.38
TRAPPC12-207ENST00000433382 ANKRD36BQ8N2N9 1353 aa17.4■□□□□ 0.38
TRAPPC12-207ENST00000433382 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
TRAPPC12-207ENST00000433382 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRAPPC12-207ENST00000433382 AXIN2Q9Y2T1 843 aa17.39■□□□□ 0.37
TRAPPC12-207ENST00000433382 SPATA31A5Q5VU36 1347 aa17.39■□□□□ 0.37
TRAPPC12-207ENST00000433382 SPATA31A7Q8IWB4 1347 aa17.39■□□□□ 0.37
TRAPPC12-207ENST00000433382 PARP4Q9UKK3 1724 aaKnown RBP17.38■□□□□ 0.37
TRAPPC12-207ENST00000433382 ARHGEF25Q86VW2 580 aa17.38■□□□□ 0.37
TRAPPC12-207ENST00000433382 UPF1Q92900 1129 aaKnown RBP eCLIP17.38■□□□□ 0.37
TRAPPC12-207ENST00000433382 SBF2Q86WG5 1849 aa17.37■□□□□ 0.37
TRAPPC12-207ENST00000433382 CARD14Q9BXL6 1004 aa17.37■□□□□ 0.37
TRAPPC12-207ENST00000433382 PEAK1Q9H792 1746 aa17.37■□□□□ 0.37
TRAPPC12-207ENST00000433382 AATKQ6ZMQ8 1374 aa17.37■□□□□ 0.37
TRAPPC12-207ENST00000433382 HDGFL2Q7Z4V5 671 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC12-207ENST00000433382 SPATA31A1Q5TZJ5 1347 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms