RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 NRKQ7Z2Y5 1582 aa35.99■■■■□ 3.35
TMEM248-205ENST00000433271 BRINP3Q76B58 766 aa35.97■■■■□ 3.35
TMEM248-205ENST00000433271 TTC21AQ8NDW8 1320 aa35.97■■■■□ 3.35
TMEM248-205ENST00000433271 GGNBP2Q9H3C7 697 aa35.94■■■■□ 3.34
TMEM248-205ENST00000433271 MORC1Q86VD1 984 aa35.94■■■■□ 3.34
TMEM248-205ENST00000433271 NME9Q86XW9 330 aa35.93■■■■□ 3.34
TMEM248-205ENST00000433271 KIF20BQ96Q89 1820 aa35.93■■■■□ 3.34
TMEM248-205ENST00000433271 NPHP3Q7Z494 1330 aa35.91■■■■□ 3.34
TMEM248-205ENST00000433271 MYBBP1AQ9BQG0 1328 aaKnown RBP35.91■■■■□ 3.34
TMEM248-205ENST00000433271 IQSEC2Q5JU85 1478 aa35.91■■■■□ 3.34
TMEM248-205ENST00000433271 CCER2I3L3R5 266 aa35.9■■■■□ 3.34
TMEM248-205ENST00000433271 KRT28Q7Z3Y7 464 aa35.9■■■■□ 3.34
TMEM248-205ENST00000433271 ANKRD26Q9UPS8 1709 aa35.87■■■■□ 3.33
TMEM248-205ENST00000433271 PAK3O75914 559 aaPredicted RBP35.86■■■■□ 3.33
TMEM248-205ENST00000433271 XPCQ01831 940 aaPredicted RBP35.86■■■■□ 3.33
TMEM248-205ENST00000433271 TOM1O60784 492 aa35.85■■■■□ 3.33
TMEM248-205ENST00000433271 CERKQ8TCT0 537 aa35.85■■■■□ 3.33
TMEM248-205ENST00000433271 COG3Q96JB2 828 aa35.85■■■■□ 3.33
TMEM248-205ENST00000433271 ZRANB1Q9UGI0 708 aa35.84■■■■□ 3.33
TMEM248-205ENST00000433271 DDX17Q92841 729 aaKnown RBP35.83■■■■□ 3.33
TMEM248-205ENST00000433271 PPP2R1AP30153 589 aa35.83■■■■□ 3.33
TMEM248-205ENST00000433271 USP31Q70CQ4 1352 aa35.82■■■■□ 3.33
TMEM248-205ENST00000433271 ABTB2Q8N961 1025 aa35.82■■■■□ 3.32
TMEM248-205ENST00000433271 NLRP13Q86W25 1043 aa35.81■■■■□ 3.32
TMEM248-205ENST00000433271 TRPM3Q9HCF6 1732 aaPredicted RBP35.8■■■■□ 3.32
TMEM248-205ENST00000433271 PIK3C2AO00443 1686 aa35.8■■■■□ 3.32
TMEM248-205ENST00000433271 PXDNQ92626 1479 aa35.8■■■■□ 3.32
TMEM248-205ENST00000433271 OVOS2A0A0J9YW53 1432 aa35.79■■■■□ 3.32
TMEM248-205ENST00000433271 OVOS2Q6IE36 1432 aa35.79■■■■□ 3.32
TMEM248-205ENST00000433271 SBNO1A3KN83 1393 aa35.79■■■■□ 3.32
TMEM248-205ENST00000433271 SCAF1Q9H7N4 1312 aaKnown RBP35.79■■■■□ 3.32
TMEM248-205ENST00000433271 TNNT2P45379 298 aaPredicted RBP35.79■■■■□ 3.32
TMEM248-205ENST00000433271 NLRP6P59044 892 aa35.77■■■■□ 3.32
TMEM248-205ENST00000433271 SOS2Q07890 1332 aaPredicted RBP35.76■■■■□ 3.31
TMEM248-205ENST00000433271 ROBO1Q9Y6N7 1651 aa35.75■■■■□ 3.31
TMEM248-205ENST00000433271 UBAP1LF5GYI3 381 aa35.74■■■■□ 3.31
TMEM248-205ENST00000433271 CCDC184Q52MB2 194 aa35.73■■■■□ 3.31
TMEM248-205ENST00000433271 NHSL1Q5SYE7 1610 aa35.73■■■■□ 3.31
TMEM248-205ENST00000433271 NUTM2GQ5VZR2 741 aa35.72■■■■□ 3.31
TMEM248-205ENST00000433271 MRS2Q9HD23 443 aa35.72■■■■□ 3.31
TMEM248-205ENST00000433271 USP54Q70EL1 1684 aa35.72■■■■□ 3.31
TMEM248-205ENST00000433271 SPATA31A3Q5VYP0 1347 aa35.7■■■■□ 3.3
TMEM248-205ENST00000433271 AATKQ6ZMQ8 1374 aa35.69■■■■□ 3.3
TMEM248-205ENST00000433271 TNS3Q68CZ2 1445 aa35.69■■■■□ 3.3
TMEM248-205ENST00000433271 ALS2Q96Q42 1657 aa35.69■■■■□ 3.3
TMEM248-205ENST00000433271 LMOD2Q6P5Q4 547 aa35.68■■■■□ 3.3
TMEM248-205ENST00000433271 MARF1Q9Y4F3 1742 aaKnown RBP35.65■■■■□ 3.3
TMEM248-205ENST00000433271 MTHFSP49914 203 aa35.65■■■■□ 3.3
TMEM248-205ENST00000433271 PIP4K2BP78356 416 aa35.65■■■■□ 3.3
TMEM248-205ENST00000433271 AHDC1Q5TGY3 1603 aaPredicted RBP35.65■■■■□ 3.3
TMEM248-205ENST00000433271 ARHGEF10O15013 1369 aa35.64■■■■□ 3.3
TMEM248-205ENST00000433271 FBLN1P23142 703 aa35.63■■■■□ 3.29
TMEM248-205ENST00000433271 POLKQ9UBT6 870 aa35.62■■■■□ 3.29
TMEM248-205ENST00000433271 USP19O94966 1318 aa35.61■■■■□ 3.29
TMEM248-205ENST00000433271 KCNH5Q8NCM2 988 aa35.59■■■■□ 3.29
TMEM248-205ENST00000433271 MAP2P11137 1827 aaKnown RBP35.58■■■■□ 3.29
TMEM248-205ENST00000433271 SOX12O15370 315 aa35.57■■■■□ 3.28
TMEM248-205ENST00000433271 RRS1Q15050 365 aaKnown RBP35.56■■■■□ 3.28
TMEM248-205ENST00000433271 LRRC59Q96AG4 307 aaKnown RBP35.56■■■■□ 3.28
TMEM248-205ENST00000433271 SMG6Q86US8 1419 aaKnown RBP35.56■■■■□ 3.28
TMEM248-205ENST00000433271 SLIT3O75094 1523 aa35.55■■■■□ 3.28
TMEM248-205ENST00000433271 CFAP53Q96M91 514 aa35.55■■■■□ 3.28
TMEM248-205ENST00000433271 GCP02774 474 aa35.54■■■■□ 3.28
TMEM248-205ENST00000433271 PNISRQ8TF01 805 aaKnown RBP35.54■■■■□ 3.28
TMEM248-205ENST00000433271 EMILIN1Q9Y6C2 1016 aa35.54■■■■□ 3.28
TMEM248-205ENST00000433271 PNPLA6Q8IY17 1366 aa35.52■■■■□ 3.28
TMEM248-205ENST00000433271 MED1Q15648 1581 aaPredicted RBP35.51■■■■□ 3.28
TMEM248-205ENST00000433271 PPM1GO15355 546 aaPredicted RBP35.51■■■■□ 3.28
TMEM248-205ENST00000433271 NFAT5O94916 1531 aa35.51■■■■□ 3.27
TMEM248-205ENST00000433271 INSRP06213 1382 aa35.5■■■■□ 3.27
TMEM248-205ENST00000433271 MAP3K19Q56UN5 1328 aa35.5■■■■□ 3.27
TMEM248-205ENST00000433271 PHLPP1O60346 1717 aa35.49■■■■□ 3.27
TMEM248-205ENST00000433271 CDK12Q9NYV4 1490 aaPredicted RBP35.48■■■■□ 3.27
TMEM248-205ENST00000433271 PLEKHG5O94827 1062 aa35.47■■■■□ 3.27
TMEM248-205ENST00000433271 KIF24Q5T7B8 1368 aa35.46■■■■□ 3.27
TMEM248-205ENST00000433271 COL16A1Q07092 1604 aaPredicted RBP35.46■■■■□ 3.27
TMEM248-205ENST00000433271 FAM9BQ8IZU0 186 aa35.45■■■■□ 3.27
TMEM248-205ENST00000433271 CABLES1Q8TDN4 633 aa35.45■■■■□ 3.27
TMEM248-205ENST00000433271 COL3A1P02461 1466 aaPredicted RBP35.43■■■■□ 3.26
TMEM248-205ENST00000433271 CRYBG1Q9Y4K1 1723 aa35.43■■■■□ 3.26
TMEM248-205ENST00000433271 AMPHP49418 695 aa35.43■■■■□ 3.26
TMEM248-205ENST00000433271 PHRF1Q9P1Y6 1649 aaKnown RBP35.42■■■■□ 3.26
TMEM248-205ENST00000433271 ARHGEF25Q86VW2 580 aa35.42■■■■□ 3.26
TMEM248-205ENST00000433271 FLT4P35916 1363 aa35.41■■■■□ 3.26
TMEM248-205ENST00000433271 PEAK1Q9H792 1746 aa35.4■■■■□ 3.26
TMEM248-205ENST00000433271 DIAPH1O60610 1272 aaKnown RBP35.39■■■■□ 3.26
TMEM248-205ENST00000433271 WDR43Q15061 677 aaKnown RBP eCLIP35.39■■■■□ 3.26
TMEM248-205ENST00000433271 RTL1A6NKG5 1358 aa35.39■■■■□ 3.26
TMEM248-205ENST00000433271 LTN1O94822 1766 aa35.37■■■■□ 3.25
TMEM248-205ENST00000433271 HSP90AB2PQ58FF8 381 aa35.37■■■■□ 3.25
TMEM248-205ENST00000433271 HOXC9P31274 260 aa35.36■■■■□ 3.25
TMEM248-205ENST00000433271 NUDCQ9Y266 331 aa35.36■■■■□ 3.25
TMEM248-205ENST00000433271 ZC3H6P61129 1189 aaKnown RBP35.35■■■■□ 3.25
TMEM248-205ENST00000433271 IP6K1Q92551 441 aa35.35■■■■□ 3.25
TMEM248-205ENST00000433271 COL22A1Q8NFW1 1626 aaPredicted RBP35.35■■■■□ 3.25
TMEM248-205ENST00000433271 SHPRHQ149N8 1683 aa35.34■■■■□ 3.25
TMEM248-205ENST00000433271 ADAMTS8Q9UP79 889 aa35.34■■■■□ 3.25
TMEM248-205ENST00000433271 CPDO75976 1380 aa35.34■■■■□ 3.25
TMEM248-205ENST00000433271 HAP1P54257 671 aaPredicted RBP35.33■■■■□ 3.25
TMEM248-205ENST00000433271 IL13P35225 146 aa35.32■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms