RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 TNMDQ9H2S6 317 aa12.45□□□□□ -0.42
PKNOX1-203ENST00000432907 IPO4Q8TEX9 1081 aaKnown RBP12.45□□□□□ -0.42
PKNOX1-203ENST00000432907 CCDC94Q9BW85 323 aaPredicted RBP12.45□□□□□ -0.42
PKNOX1-203ENST00000432907 FOSBP53539 338 aa12.45□□□□□ -0.42
PKNOX1-203ENST00000432907 FILIP1Q7Z7B0 1213 aa12.45□□□□□ -0.42
PKNOX1-203ENST00000432907 ROCK1Q13464 1354 aa12.45□□□□□ -0.42
PKNOX1-203ENST00000432907 POLR3GO15318 223 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-203ENST00000432907 RIPK4P57078 832 aa12.44□□□□□ -0.42
PKNOX1-203ENST00000432907 CPLX2Q6PUV4 134 aaKnown RBP12.44□□□□□ -0.42
PKNOX1-203ENST00000432907 OLFM4Q6UX06 510 aa12.44□□□□□ -0.42
PKNOX1-203ENST00000432907 CPLX1O14810 134 aa12.44□□□□□ -0.42
PKNOX1-203ENST00000432907 DHX8Q14562 1220 aaKnown RBP12.44□□□□□ -0.42
PKNOX1-203ENST00000432907 PTPN14Q15678 1187 aa12.44□□□□□ -0.42
PKNOX1-203ENST00000432907 CCDC102AQ96A19 550 aa12.44□□□□□ -0.42
PKNOX1-203ENST00000432907 SYNJ2O15056 1496 aa12.44□□□□□ -0.42
PKNOX1-203ENST00000432907 FAM177A1Q8N128 213 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-203ENST00000432907 ARAP1Q96P48 1450 aa12.44□□□□□ -0.42
PKNOX1-203ENST00000432907 NOL10Q9BSC4 688 aaKnown RBP12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 TOMM22Q9NS69 142 aa12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 PDCP20941 246 aa12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 OFD1O75665 1012 aa12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 GTF2A1P52655 376 aaPredicted RBP12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 SYNE3Q6ZMZ3 975 aa12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 CENPHQ9H3R5 247 aa12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 HNRNPMP52272 730 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■□□□□ 11.3
PKNOX1-203ENST00000432907 GCC1Q96CN9 775 aa12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 USP25Q9UHP3 1055 aa12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 LRRC9Q6ZRR7 1453 aa12.43□□□□□ -0.42
PKNOX1-203ENST00000432907 TNNT1P13805 278 aa12.42□□□□□ -0.42
PKNOX1-203ENST00000432907 SSFA2P28290 1259 aa12.42□□□□□ -0.42
PKNOX1-203ENST00000432907 TRIM29Q14134 588 aa12.42□□□□□ -0.42
PKNOX1-203ENST00000432907 KIF18AQ8NI77 898 aa12.42□□□□□ -0.42
PKNOX1-203ENST00000432907 KIF2AO00139 706 aaPredicted RBP12.42□□□□□ -0.42
PKNOX1-203ENST00000432907 C16orf45Q96MC5 204 aaPredicted RBP12.42□□□□□ -0.42
PKNOX1-203ENST00000432907 CCDC144AA2RUR9 1427 aa12.42□□□□□ -0.42
PKNOX1-203ENST00000432907 PDIA4P13667 645 aaKnown RBP12.42□□□□□ -0.42
PKNOX1-203ENST00000432907 NAP1L1P55209 391 aaKnown RBP12.41□□□□□ -0.42
PKNOX1-203ENST00000432907 NINLQ9Y2I6 1382 aa12.41□□□□□ -0.42
PKNOX1-203ENST00000432907 KRT222Q8N1A0 295 aa12.41□□□□□ -0.42
PKNOX1-203ENST00000432907 C20orf194Q5TEA3 1177 aa12.41□□□□□ -0.42
PKNOX1-203ENST00000432907 CYB5RLQ6IPT4 315 aa12.41□□□□□ -0.42
PKNOX1-203ENST00000432907 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.41□□□□□ -0.42
PKNOX1-203ENST00000432907 MYOM3Q5VTT5 1437 aa12.4□□□□□ -0.42
PKNOX1-203ENST00000432907 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
PKNOX1-203ENST00000432907 RBM25P49756 843 aaKnown RBP12.4□□□□□ -0.42
PKNOX1-203ENST00000432907 IGSF3O75054 1194 aa12.4□□□□□ -0.42
PKNOX1-203ENST00000432907 KRT85P78386 507 aa12.4□□□□□ -0.42
PKNOX1-203ENST00000432907 NUP62CLQ9H1M0 184 aa12.4□□□□□ -0.42
PKNOX1-203ENST00000432907 IFIT2P09913 472 aaKnown RBP12.4□□□□□ -0.42
PKNOX1-203ENST00000432907 IQGAP2Q13576 1575 aa12.4□□□□□ -0.43
PKNOX1-203ENST00000432907 KLHL40Q2TBA0 621 aa12.4□□□□□ -0.43
PKNOX1-203ENST00000432907 TCP11L2Q8N4U5 519 aa12.4□□□□□ -0.43
PKNOX1-203ENST00000432907 SERPINC1P01008 464 aa12.39□□□□□ -0.43
PKNOX1-203ENST00000432907 ERC2O15083 957 aa12.39□□□□□ -0.43
PKNOX1-203ENST00000432907 TRAK1Q9UPV9 953 aa12.39□□□□□ -0.43
PKNOX1-203ENST00000432907 ZKSCAN5Q9Y2L8 839 aa12.39□□□□□ -0.43
PKNOX1-203ENST00000432907 KIF20AO95235 890 aa12.39□□□□□ -0.43
PKNOX1-203ENST00000432907 DHX37Q8IY37 1157 aaKnown RBP12.39□□□□□ -0.43
PKNOX1-203ENST00000432907 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 CCDC9Q9Y3X0 531 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 GRIN2AQ12879 1464 aa12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 PPP2R1AP30153 589 aa12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 BMS1Q14692 1282 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 MVPQ14764 893 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 CHD1LQ86WJ1 897 aa12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 FGD6Q6ZV73 1430 aa12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 IBSPP21815 317 aaPredicted RBP12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 HDGFP51858 240 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 C1orf115Q9H7X2 142 aa12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 FAM193AP78312 1265 aa12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 CEBPZQ03701 1054 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 LRRCC1Q9C099 1032 aa12.38□□□□□ -0.43
PKNOX1-203ENST00000432907 PSMA5P28066 241 aa12.37□□□□□ -0.43
PKNOX1-203ENST00000432907 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.37□□□□□ -0.43
PKNOX1-203ENST00000432907 GOLGA6L7A0A1B0GV03 622 aa12.37□□□□□ -0.43
PKNOX1-203ENST00000432907 MAP3K11Q16584 847 aa12.37□□□□□ -0.43
PKNOX1-203ENST00000432907 GGT6Q6P531 493 aa12.37□□□□□ -0.43
PKNOX1-203ENST00000432907 SMARCE1Q969G3 411 aa12.37□□□□□ -0.43
PKNOX1-203ENST00000432907 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
PKNOX1-203ENST00000432907 CCDC183Q5T5S1 534 aa12.37□□□□□ -0.43
PKNOX1-203ENST00000432907 ADCY5O95622 1261 aa12.37□□□□□ -0.43
PKNOX1-203ENST00000432907 NOLC1Q14978 699 aaKnown RBP eCLIP12.37□□□□□ -0.43
PKNOX1-203ENST00000432907 EXOSC9Q06265 439 aaKnown RBP12.36□□□□□ -0.43
PKNOX1-203ENST00000432907 MIA2Q96PC5 1412 aa12.36□□□□□ -0.43
PKNOX1-203ENST00000432907 DIAPH1O60610 1272 aaKnown RBP12.36□□□□□ -0.43
PKNOX1-203ENST00000432907 BAG4O95429 457 aaKnown RBP12.36□□□□□ -0.43
PKNOX1-203ENST00000432907 SHTN1A0MZ66 631 aa12.36□□□□□ -0.43
PKNOX1-203ENST00000432907 LMAN1P49257 510 aa12.36□□□□□ -0.43
PKNOX1-203ENST00000432907 CEP57L1Q8IYX8 460 aa12.36□□□□□ -0.43
PKNOX1-203ENST00000432907 TBC1D32Q96NH3 1257 aa12.36□□□□□ -0.43
PKNOX1-203ENST00000432907 RRBP1Q9P2E9 1410 aaKnown RBP12.35□□□□□ -0.43
PKNOX1-203ENST00000432907 GOLGA6L10A6NI86 522 aa12.35□□□□□ -0.43
PKNOX1-203ENST00000432907 GNAI1P63096 354 aa12.35□□□□□ -0.43
PKNOX1-203ENST00000432907 FAM107BQ9H098 131 aa12.35□□□□□ -0.43
PKNOX1-203ENST00000432907 NCOA2Q15596 1464 aa12.35□□□□□ -0.43
PKNOX1-203ENST00000432907 VGLL3A8MV65 326 aa12.35□□□□□ -0.43
PKNOX1-203ENST00000432907 ZSCAN23Q3MJ62 389 aa12.35□□□□□ -0.43
PKNOX1-203ENST00000432907 CCDC47Q96A33 483 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms