RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 BRWD3Q6RI45 1802 aa21.76■■□□□ 1.07
PRKDC-203ENST00000432581 PAK3O75914 559 aaPredicted RBP21.75■■□□□ 1.07
PRKDC-203ENST00000432581 FAM98CQ17RN3 349 aaKnown RBP21.75■■□□□ 1.07
PRKDC-203ENST00000432581 ALS2Q96Q42 1657 aa21.75■■□□□ 1.07
PRKDC-203ENST00000432581 COL14A1Q05707 1796 aaKnown RBP21.73■■□□□ 1.07
PRKDC-203ENST00000432581 NUDT16Q96DE0 195 aaKnown RBP21.72■■□□□ 1.07
PRKDC-203ENST00000432581 PRDM11Q9NQV5 511 aa21.72■■□□□ 1.07
PRKDC-203ENST00000432581 NRAPQ86VF7 1730 aa21.72■■□□□ 1.07
PRKDC-203ENST00000432581 SPATA31A5Q5VU36 1347 aa21.71■■□□□ 1.07
PRKDC-203ENST00000432581 SPATA31A7Q8IWB4 1347 aa21.71■■□□□ 1.07
PRKDC-203ENST00000432581 ATP7BP35670 1465 aa21.71■■□□□ 1.07
PRKDC-203ENST00000432581 BAG6P46379 1132 aa21.7■■□□□ 1.06
PRKDC-203ENST00000432581 ARHGEF28Q8N1W1 1705 aaKnown RBP21.67■■□□□ 1.06
PRKDC-203ENST00000432581 CDK19Q9BWU1 502 aa21.67■■□□□ 1.06
PRKDC-203ENST00000432581 POLR3AO14802 1390 aaPredicted RBP21.65■■□□□ 1.06
PRKDC-203ENST00000432581 KIAA0232Q92628 1395 aa21.65■■□□□ 1.06
PRKDC-203ENST00000432581 CCDC61Q9Y6R9 512 aa21.65■■□□□ 1.06
PRKDC-203ENST00000432581 ITSN1Q15811 1721 aa21.65■■□□□ 1.06
PRKDC-203ENST00000432581 CRYBG1Q9Y4K1 1723 aa21.64■■□□□ 1.06
PRKDC-203ENST00000432581 ACEP12821 1306 aa21.62■■□□□ 1.05
PRKDC-203ENST00000432581 SPATA31A1Q5TZJ5 1347 aa21.62■■□□□ 1.05
PRKDC-203ENST00000432581 PLEKHG3A1L390 1219 aa21.62■■□□□ 1.05
PRKDC-203ENST00000432581 NBPF8Q3BBV2 869 aa21.62■■□□□ 1.05
PRKDC-203ENST00000432581 THSD7AQ9UPZ6 1657 aa21.61■■□□□ 1.05
PRKDC-203ENST00000432581 CHRNA2Q15822 529 aa21.61■■□□□ 1.05
PRKDC-203ENST00000432581 ZC3H6P61129 1189 aaKnown RBP21.6■■□□□ 1.05
PRKDC-203ENST00000432581 NUTM2GQ5VZR2 741 aa21.6■■□□□ 1.05
PRKDC-203ENST00000432581 DISP2A7MBM2 1401 aa21.59■■□□□ 1.05
PRKDC-203ENST00000432581 EN1Q05925 392 aaPredicted RBP21.59■■□□□ 1.05
PRKDC-203ENST00000432581 FAM182BQ5T319 152 aa21.59■■□□□ 1.05
PRKDC-203ENST00000432581 STRN4Q9NRL3 753 aa21.59■■□□□ 1.05
PRKDC-203ENST00000432581 KIAA1210Q9ULL0 1709 aa21.58■■□□□ 1.05
PRKDC-203ENST00000432581 PSDA5PKW4 1024 aaPredicted RBP21.57■■□□□ 1.04
PRKDC-203ENST00000432581 ABTB2Q8N961 1025 aa21.57■■□□□ 1.04
PRKDC-203ENST00000432581 PHRF1Q9P1Y6 1649 aaKnown RBP21.57■■□□□ 1.04
PRKDC-203ENST00000432581 TOPAZ1Q8N9V7 1692 aa21.56■■□□□ 1.04
PRKDC-203ENST00000432581 LRP5O75197 1615 aa21.56■■□□□ 1.04
PRKDC-203ENST00000432581 RGPD1P0DJD0 1748 aa21.56■■□□□ 1.04
PRKDC-203ENST00000432581 EVA1CP58658 441 aa21.56■■□□□ 1.04
PRKDC-203ENST00000432581 NBPF1Q3BBV0 1214 aa21.56■■□□□ 1.04
PRKDC-203ENST00000432581 FAM196AQ6ZSG2 479 aa21.56■■□□□ 1.04
PRKDC-203ENST00000432581 SRPK2P78362 688 aaKnown RBP21.55■■□□□ 1.04
PRKDC-203ENST00000432581 BARGINQ6ZT62 677 aa21.55■■□□□ 1.04
PRKDC-203ENST00000432581 CPDO75976 1380 aa21.55■■□□□ 1.04
PRKDC-203ENST00000432581 SSH2Q76I76 1423 aa21.55■■□□□ 1.04
PRKDC-203ENST00000432581 USP19O94966 1318 aa21.55■■□□□ 1.04
PRKDC-203ENST00000432581 CENPJQ9HC77 1338 aaPredicted RBP21.55■■□□□ 1.04
PRKDC-203ENST00000432581 BRD4O60885 1362 aaPredicted RBP21.53■■□□□ 1.04
PRKDC-203ENST00000432581 NLRP13Q86W25 1043 aa21.53■■□□□ 1.04
PRKDC-203ENST00000432581 USP35Q9P2H5 1018 aa21.52■■□□□ 1.04
PRKDC-203ENST00000432581 PPIP5K1Q6PFW1 1433 aa21.52■■□□□ 1.04
PRKDC-203ENST00000432581 TRIM37O94972 964 aa21.51■■□□□ 1.03
PRKDC-203ENST00000432581 PDE3BQ13370 1112 aa21.51■■□□□ 1.03
PRKDC-203ENST00000432581 NRKQ7Z2Y5 1582 aa21.51■■□□□ 1.03
PRKDC-203ENST00000432581 GCP02774 474 aa21.5■■□□□ 1.03
PRKDC-203ENST00000432581 EZH2Q15910 746 aaKnown RBP21.5■■□□□ 1.03
PRKDC-203ENST00000432581 TCP11L2Q8N4U5 519 aa21.5■■□□□ 1.03
PRKDC-203ENST00000432581 PARD3Q8TEW0 1356 aa21.49■■□□□ 1.03
PRKDC-203ENST00000432581 R3HDM1Q15032 1099 aaKnown RBP21.49■■□□□ 1.03
PRKDC-203ENST00000432581 LARP1Q6PKG0 1096 aaKnown RBP21.49■■□□□ 1.03
PRKDC-203ENST00000432581 CAMKK2Q96RR4 588 aa21.49■■□□□ 1.03
PRKDC-203ENST00000432581 CABP2Q9NPB3 220 aa21.49■■□□□ 1.03
PRKDC-203ENST00000432581 THRAP3Q9Y2W1 955 aaKnown RBP21.49■■□□□ 1.03
PRKDC-203ENST00000432581 CAMTA1Q9Y6Y1 1673 aa21.49■■□□□ 1.03
PRKDC-203ENST00000432581 TNS1Q9HBL0 1735 aaKnown RBP21.48■■□□□ 1.03
PRKDC-203ENST00000432581 APBA3O96018 575 aa21.47■■□□□ 1.03
PRKDC-203ENST00000432581 LMO7Q8WWI1 1683 aa21.45■■□□□ 1.02
PRKDC-203ENST00000432581 CABP1Q9NZU7 370 aa21.44■■□□□ 1.02
PRKDC-203ENST00000432581 USP6P35125 1406 aa21.44■■□□□ 1.02
PRKDC-203ENST00000432581 C11orf95C9JLR9 678 aaPredicted RBP21.43■■□□□ 1.02
PRKDC-203ENST00000432581 COL5A2P05997 1499 aaPredicted RBP21.43■■□□□ 1.02
PRKDC-203ENST00000432581 NLRP6P59044 892 aa21.42■■□□□ 1.02
PRKDC-203ENST00000432581 AATKQ6ZMQ8 1374 aa21.41■■□□□ 1.02
PRKDC-203ENST00000432581 EVC2Q86UK5 1308 aa21.41■■□□□ 1.02
PRKDC-203ENST00000432581 L3MBTL2Q969R5 705 aa21.41■■□□□ 1.02
PRKDC-203ENST00000432581 CRB1P82279 1406 aa21.4■■□□□ 1.02
PRKDC-203ENST00000432581 QRICH2Q9H0J4 1663 aa21.39■■□□□ 1.01
PRKDC-203ENST00000432581 ZBTB7CA1YPR0 619 aa21.38■■□□□ 1.01
PRKDC-203ENST00000432581 NBPF14Q5TI25 921 aa21.38■■□□□ 1.01
PRKDC-203ENST00000432581 SLIT3O75094 1523 aa21.38■■□□□ 1.01
PRKDC-203ENST00000432581 ZNF692Q9BU19 519 aaPredicted RBP21.36■■□□□ 1.01
PRKDC-203ENST00000432581 OVOS2A0A0G2JMS6 1433 aa21.35■■□□□ 1.01
PRKDC-203ENST00000432581 OVOS2A0A0J9YW53 1432 aa21.35■■□□□ 1.01
PRKDC-203ENST00000432581 OVOS2Q6IE36 1432 aa21.35■■□□□ 1.01
PRKDC-203ENST00000432581 PARP4Q9UKK3 1724 aaKnown RBP21.35■■□□□ 1.01
PRKDC-203ENST00000432581 TOM1L2Q6ZVM7 507 aa21.34■■□□□ 1.01
PRKDC-203ENST00000432581 ROCK2O75116 1388 aaKnown RBP21.34■■□□□ 1.01
PRKDC-203ENST00000432581 DDB1Q16531 1140 aa21.33■■□□□ 1.01
PRKDC-203ENST00000432581 KCNH5Q8NCM2 988 aa21.33■■□□□ 1.01
PRKDC-203ENST00000432581 WDR17Q8IZU2 1322 aa21.32■■□□□ 1
PRKDC-203ENST00000432581 RREB1Q92766 1687 aa21.32■■□□□ 1
PRKDC-203ENST00000432581 TTC21BQ7Z4L5 1316 aa21.31■■□□□ 1
PRKDC-203ENST00000432581 CPSF1Q10570 1443 aaKnown RBP21.31■■□□□ 1
PRKDC-203ENST00000432581 CDCA7Q9BWT1 371 aaPredicted RBP21.31■■□□□ 1
PRKDC-203ENST00000432581 TTC21AQ8NDW8 1320 aa21.3■■□□□ 1
PRKDC-203ENST00000432581 TRPM1Q7Z4N2 1603 aa21.3■■□□□ 1
PRKDC-203ENST00000432581 ARHGEF25Q86VW2 580 aa21.3■■□□□ 1
PRKDC-203ENST00000432581 SIN3AQ96ST3 1273 aa21.3■■□□□ 1
PRKDC-203ENST00000432581 PIK3C2AO00443 1686 aa21.3■■□□□ 1
PRKDC-203ENST00000432581 AXIN2Q9Y2T1 843 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms