RNA–Protein interactions for RNA: ENST00000432260.2

CUL3-205, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-205ENST00000432260 LIMD1Q9UGP4 676 aa8.61□□□□□ -1.03
CUL3-205ENST00000432260 ALDH1A1P00352 501 aa8.6□□□□□ -1.03
CUL3-205ENST00000432260 CTHP32929 405 aa8.6□□□□□ -1.03
CUL3-205ENST00000432260 PRPF38BQ5VTL8 546 aaKnown RBP8.59□□□□□ -1.03
CUL3-205ENST00000432260 LYPD8Q6UX82 237 aa8.59□□□□□ -1.03
CUL3-205ENST00000432260 GMPR2Q9P2T1 348 aaKnown RBP8.59□□□□□ -1.03
CUL3-205ENST00000432260 SIAH2O43255 324 aa8.58□□□□□ -1.04
CUL3-205ENST00000432260 NUTM2BA6NNL0 878 aaPredicted RBP8.57□□□□□ -1.04
CUL3-205ENST00000432260 NUTM2EB1AL46 878 aaPredicted RBP8.57□□□□□ -1.04
CUL3-205ENST00000432260 QPCTQ16769 361 aa8.57□□□□□ -1.04
CUL3-205ENST00000432260 NUTM2DQ5VT03 806 aaPredicted RBP8.57□□□□□ -1.04
CUL3-205ENST00000432260 NUTM2AQ8IVF1 878 aaPredicted RBP8.57□□□□□ -1.04
CUL3-205ENST00000432260 TSC1Q92574 1164 aa8.57□□□□□ -1.04
CUL3-205ENST00000432260 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
CUL3-205ENST00000432260 SH3D19Q5HYK7 790 aa8.56□□□□□ -1.04
CUL3-205ENST00000432260 ZNF511Q8NB15 262 aa8.56□□□□□ -1.04
CUL3-205ENST00000432260 MAP10Q9P2G4 905 aa8.56□□□□□ -1.04
CUL3-205ENST00000432260 C11orf95C9JLR9 678 aaPredicted RBP8.55□□□□□ -1.04
CUL3-205ENST00000432260 PER1O15534 1290 aaPredicted RBP8.55□□□□□ -1.04
CUL3-205ENST00000432260 LILRB3O75022 631 aa8.55□□□□□ -1.04
CUL3-205ENST00000432260 CLK2P49760 499 aaKnown RBP8.55□□□□□ -1.04
CUL3-205ENST00000432260 RSPH6AQ9H0K4 717 aa8.55□□□□□ -1.04
CUL3-205ENST00000432260 ATP13A2Q9NQ11 1180 aa8.55□□□□□ -1.04
CUL3-205ENST00000432260 POLR3EQ9NVU0 708 aa8.55□□□□□ -1.04
CUL3-205ENST00000432260 WASF2Q9Y6W5 498 aa8.55□□□□□ -1.04
CUL3-205ENST00000432260 TUSC1Q2TAM9 212 aa8.54□□□□□ -1.04
CUL3-205ENST00000432260 RTL5Q5HYW3 569 aaPredicted RBP8.54□□□□□ -1.04
CUL3-205ENST00000432260 TLL2Q9Y6L7 1015 aa8.54□□□□□ -1.04
CUL3-205ENST00000432260 F12P00748 615 aaPredicted RBP8.53□□□□□ -1.04
CUL3-205ENST00000432260 SKIV2LQ15477 1246 aaKnown RBP8.52□□□□□ -1.05
CUL3-205ENST00000432260 GOPCQ9HD26 462 aa8.52□□□□□ -1.05
CUL3-205ENST00000432260 VARSP26640 1264 aaKnown RBP8.51□□□□□ -1.05
CUL3-205ENST00000432260 FOXJ1Q92949 421 aa8.51□□□□□ -1.05
CUL3-205ENST00000432260 PROCA1Q8NCQ7 364 aaPredicted RBP8.5□□□□□ -1.05
CUL3-205ENST00000432260 PCMTD1Q96MG8 357 aaPredicted RBP8.5□□□□□ -1.05
CUL3-205ENST00000432260 ATP1B4Q9UN42 357 aaPredicted RBP8.5□□□□□ -1.05
CUL3-205ENST00000432260 SNRPBP14678 240 aaKnown RBP8.49□□□□□ -1.05
CUL3-205ENST00000432260 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
CUL3-205ENST00000432260 CAPN5O15484 640 aaPredicted RBP8.48□□□□□ -1.05
CUL3-205ENST00000432260 AGERQ15109 404 aa8.48□□□□□ -1.05
CUL3-205ENST00000432260 HELBQ8NG08 1087 aaPredicted RBP8.48□□□□□ -1.05
CUL3-205ENST00000432260 FAM174AQ8TBP5 190 aa8.48□□□□□ -1.05
CUL3-205ENST00000432260 BMP1P13497 986 aa8.47□□□□□ -1.05
CUL3-205ENST00000432260 NNTQ13423 1086 aa8.47□□□□□ -1.05
CUL3-205ENST00000432260 TRIM47Q96LD4 638 aa8.47□□□□□ -1.05
CUL3-205ENST00000432260 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.47□□□□□ -1.05
CUL3-205ENST00000432260 SENP2Q9HC62 589 aa8.47□□□□□ -1.05
CUL3-205ENST00000432260 ARID5BQ14865 1188 aa8.46□□□□□ -1.06
CUL3-205ENST00000432260 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
CUL3-205ENST00000432260 TREML4Q6UXN2 200 aa8.45□□□□□ -1.06
CUL3-205ENST00000432260 TRIM46Q7Z4K8 759 aa8.45□□□□□ -1.06
CUL3-205ENST00000432260 MPNDQ8N594 471 aa8.45□□□□□ -1.06
CUL3-205ENST00000432260 CTDSPL2Q05D32 466 aa8.44□□□□□ -1.06
CUL3-205ENST00000432260 FBXO31Q5XUX0 539 aaPredicted RBP8.44□□□□□ -1.06
CUL3-205ENST00000432260 ARMC2Q8NEN0 867 aa8.44□□□□□ -1.06
CUL3-205ENST00000432260 KIFC2Q96AC6 838 aa8.44□□□□□ -1.06
CUL3-205ENST00000432260 BPHLQ86WA6 291 aaPredicted RBP8.43□□□□□ -1.06
CUL3-205ENST00000432260 ADH1CP00326 375 aa8.42□□□□□ -1.06
CUL3-205ENST00000432260 WDR4P57081 412 aaKnown RBP8.42□□□□□ -1.06
CUL3-205ENST00000432260 LCE2CQ5TA81 110 aa8.42□□□□□ -1.06
CUL3-205ENST00000432260 CDK15Q96Q40 435 aa8.42□□□□□ -1.06
CUL3-205ENST00000432260 WFS1O76024 890 aa8.41□□□□□ -1.06
CUL3-205ENST00000432260 NBPF14Q5TI25 921 aa8.41□□□□□ -1.06
CUL3-205ENST00000432260 LRRN4Q8WUT4 740 aa8.41□□□□□ -1.06
CUL3-205ENST00000432260 TIMP2P16035 220 aa8.4□□□□□ -1.06
CUL3-205ENST00000432260 NFX1Q12986 1120 aaKnown RBP8.4□□□□□ -1.06
CUL3-205ENST00000432260 MAGEB6P1A0A0J9YX57 407 aa8.39□□□□□ -1.07
CUL3-205ENST00000432260 NR3C2P08235 984 aa8.39□□□□□ -1.07
CUL3-205ENST00000432260 RFC5P40937 340 aa8.39□□□□□ -1.07
CUL3-205ENST00000432260 PPP2R2DQ66LE6 453 aa8.39□□□□□ -1.07
CUL3-205ENST00000432260 SH3BP5LQ7L8J4 393 aa8.39□□□□□ -1.07
CUL3-205ENST00000432260 SH3RF1Q7Z6J0 888 aa8.39□□□□□ -1.07
CUL3-205ENST00000432260 GRM5P41594 1212 aa8.38□□□□□ -1.07
CUL3-205ENST00000432260 ZFP42Q96MM3 310 aa8.38□□□□□ -1.07
CUL3-205ENST00000432260 C1QTNF2Q9BXJ5 285 aa8.38□□□□□ -1.07
CUL3-205ENST00000432260 KLF16Q9BXK1 252 aaPredicted RBP8.38□□□□□ -1.07
CUL3-205ENST00000432260 CARD14Q9BXL6 1004 aa8.38□□□□□ -1.07
CUL3-205ENST00000432260 ZFAND3Q9H8U3 227 aa8.38□□□□□ -1.07
CUL3-205ENST00000432260 TERTO14746 1132 aaKnown RBP8.37□□□□□ -1.07
CUL3-205ENST00000432260 AP1G2O75843 785 aa8.37□□□□□ -1.07
CUL3-205ENST00000432260 ZIC2O95409 532 aaPredicted RBP8.37□□□□□ -1.07
CUL3-205ENST00000432260 NR5A1Q13285 461 aa8.37□□□□□ -1.07
CUL3-205ENST00000432260 NR6A1Q15406 480 aa8.37□□□□□ -1.07
CUL3-205ENST00000432260 MRPL14Q6P1L8 145 aaKnown RBP8.37□□□□□ -1.07
CUL3-205ENST00000432260 FSHRP23945 695 aa8.36□□□□□ -1.07
CUL3-205ENST00000432260 GPKOWQ92917 476 aaPredicted RBP eCLIP8.36□□□□□ -1.07
CUL3-205ENST00000432260 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
CUL3-205ENST00000432260 PURBQ96QR8 312 aaKnown RBP8.36□□□□□ -1.07
CUL3-205ENST00000432260 VASH1Q7L8A9 365 aaPredicted RBP8.35□□□□□ -1.07
CUL3-205ENST00000432260 SCARF1Q14162 830 aa8.34□□□□□ -1.07
CUL3-205ENST00000432260 ERFEQ4G0M1 354 aa8.34□□□□□ -1.07
CUL3-205ENST00000432260 TRMT44Q8IYL2 757 aaKnown RBP8.34□□□□□ -1.07
CUL3-205ENST00000432260 ARHGAP9Q9BRR9 750 aa8.34□□□□□ -1.07
CUL3-205ENST00000432260 FKBPLQ9UIM3 349 aa8.34□□□□□ -1.07
CUL3-205ENST00000432260 PDXDC2PQ6P474 469 aa8.33□□□□□ -1.08
CUL3-205ENST00000432260 MAP4K5Q9Y4K4 846 aa8.33□□□□□ -1.08
CUL3-205ENST00000432260 SOBPA7XYQ1 873 aa8.32□□□□□ -1.08
CUL3-205ENST00000432260 C6orf118Q5T5N4 469 aa8.32□□□□□ -1.08
CUL3-205ENST00000432260 EPS8L1Q8TE68 723 aa8.32□□□□□ -1.08
CUL3-205ENST00000432260 GTF3C3Q9Y5Q9 886 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms