RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 NRAPQ86VF7 1730 aa20.24■□□□□ 0.83
SEC13-211ENST00000431352 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
SEC13-211ENST00000431352 NUDT16Q96DE0 195 aaKnown RBP20.23■□□□□ 0.83
SEC13-211ENST00000431352 COL14A1Q05707 1796 aaKnown RBP20.22■□□□□ 0.83
SEC13-211ENST00000431352 FAM98CQ17RN3 349 aaKnown RBP20.21■□□□□ 0.83
SEC13-211ENST00000431352 KRT27Q7Z3Y8 459 aa20.21■□□□□ 0.83
SEC13-211ENST00000431352 DEFB132Q7Z7B7 95 aa20.21■□□□□ 0.83
SEC13-211ENST00000431352 CDK19Q9BWU1 502 aa20.21■□□□□ 0.83
SEC13-211ENST00000431352 CRYBG1Q9Y4K1 1723 aa20.2■□□□□ 0.82
SEC13-211ENST00000431352 SF3B2Q13435 895 aaKnown RBP20.2■□□□□ 0.82
SEC13-211ENST00000431352 PRDM11Q9NQV5 511 aa20.2■□□□□ 0.82
SEC13-211ENST00000431352 NUTM2GQ5VZR2 741 aa20.19■□□□□ 0.82
SEC13-211ENST00000431352 ONECUT3O60422 494 aaPredicted RBP20.17■□□□□ 0.82
SEC13-211ENST00000431352 NBPF1Q3BBV0 1214 aa20.17■□□□□ 0.82
SEC13-211ENST00000431352 TOPAZ1Q8N9V7 1692 aa20.16■□□□□ 0.82
SEC13-211ENST00000431352 KIAA1210Q9ULL0 1709 aa20.16■□□□□ 0.82
SEC13-211ENST00000431352 KIAA0232Q92628 1395 aa20.16■□□□□ 0.82
SEC13-211ENST00000431352 PHRF1Q9P1Y6 1649 aaKnown RBP20.16■□□□□ 0.82
SEC13-211ENST00000431352 SRCAPQ6ZRS2 3230 aa20.15■□□□□ 0.82
SEC13-211ENST00000431352 CHRNA2Q15822 529 aa20.15■□□□□ 0.82
SEC13-211ENST00000431352 ACEP12821 1306 aa20.14■□□□□ 0.81
SEC13-211ENST00000431352 SPATA31A5Q5VU36 1347 aa20.13■□□□□ 0.81
SEC13-211ENST00000431352 SPATA31A7Q8IWB4 1347 aa20.13■□□□□ 0.81
SEC13-211ENST00000431352 ZC3H6P61129 1189 aaKnown RBP20.13■□□□□ 0.81
SEC13-211ENST00000431352 FAM182BQ5T319 152 aa20.13■□□□□ 0.81
SEC13-211ENST00000431352 STRN4Q9NRL3 753 aa20.13■□□□□ 0.81
SEC13-211ENST00000431352 POLR3AO14802 1390 aaPredicted RBP20.12■□□□□ 0.81
SEC13-211ENST00000431352 SRPK2P78362 688 aaKnown RBP20.12■□□□□ 0.81
SEC13-211ENST00000431352 CCDC61Q9Y6R9 512 aa20.12■□□□□ 0.81
SEC13-211ENST00000431352 NBPF8Q3BBV2 869 aa20.11■□□□□ 0.81
SEC13-211ENST00000431352 CENPJQ9HC77 1338 aaPredicted RBP20.1■□□□□ 0.81
SEC13-211ENST00000431352 THSD7AQ9UPZ6 1657 aa20.1■□□□□ 0.81
SEC13-211ENST00000431352 PPIP5K1Q6PFW1 1433 aa20.09■□□□□ 0.81
SEC13-211ENST00000431352 NRKQ7Z2Y5 1582 aa20.08■□□□□ 0.81
SEC13-211ENST00000431352 QRICH2Q9H0J4 1663 aa20.08■□□□□ 0.81
SEC13-211ENST00000431352 BAG6P46379 1132 aa20.08■□□□□ 0.81
SEC13-211ENST00000431352 ABTB2Q8N961 1025 aa20.08■□□□□ 0.81
SEC13-211ENST00000431352 CABP2Q9NPB3 220 aa20.08■□□□□ 0.81
SEC13-211ENST00000431352 PLEKHG3A1L390 1219 aa20.07■□□□□ 0.8
SEC13-211ENST00000431352 USP35Q9P2H5 1018 aa20.07■□□□□ 0.8
SEC13-211ENST00000431352 SPATA31A1Q5TZJ5 1347 aa20.06■□□□□ 0.8
SEC13-211ENST00000431352 L3MBTL2Q969R5 705 aa20.05■□□□□ 0.8
SEC13-211ENST00000431352 PSDA5PKW4 1024 aaPredicted RBP20.04■□□□□ 0.8
SEC13-211ENST00000431352 EVA1CP58658 441 aa20.04■□□□□ 0.8
SEC13-211ENST00000431352 RGPD1P0DJD0 1748 aa20.04■□□□□ 0.8
SEC13-211ENST00000431352 ZBTB7CA1YPR0 619 aa20.03■□□□□ 0.8
SEC13-211ENST00000431352 EN1Q05925 392 aaPredicted RBP20.03■□□□□ 0.8
SEC13-211ENST00000431352 SSH2Q76I76 1423 aa20.02■□□□□ 0.8
SEC13-211ENST00000431352 SIN3AQ96ST3 1273 aa20.02■□□□□ 0.8
SEC13-211ENST00000431352 USP19O94966 1318 aa20.02■□□□□ 0.79
SEC13-211ENST00000431352 CAMTA1Q9Y6Y1 1673 aa20.01■□□□□ 0.79
SEC13-211ENST00000431352 NEUROD1Q13562 356 aa20.01■□□□□ 0.79
SEC13-211ENST00000431352 TNS1Q9HBL0 1735 aaKnown RBP20■□□□□ 0.79
SEC13-211ENST00000431352 LARP1Q6PKG0 1096 aaKnown RBP20■□□□□ 0.79
SEC13-211ENST00000431352 NLRP13Q86W25 1043 aa20■□□□□ 0.79
SEC13-211ENST00000431352 CABP1Q9NZU7 370 aa20■□□□□ 0.79
SEC13-211ENST00000431352 CPDO75976 1380 aa19.99■□□□□ 0.79
SEC13-211ENST00000431352 TRPM1Q7Z4N2 1603 aa19.99■□□□□ 0.79
SEC13-211ENST00000431352 LMO7Q8WWI1 1683 aa19.99■□□□□ 0.79
SEC13-211ENST00000431352 TRIM37O94972 964 aa19.98■□□□□ 0.79
SEC13-211ENST00000431352 USP6P35125 1406 aa19.98■□□□□ 0.79
SEC13-211ENST00000431352 ROCK2O75116 1388 aaKnown RBP19.97■□□□□ 0.79
SEC13-211ENST00000431352 GCP02774 474 aa19.97■□□□□ 0.79
SEC13-211ENST00000431352 FAM196AQ6ZSG2 479 aa19.96■□□□□ 0.79
SEC13-211ENST00000431352 EVC2Q86UK5 1308 aa19.96■□□□□ 0.79
SEC13-211ENST00000431352 NLRP6P59044 892 aa19.95■□□□□ 0.78
SEC13-211ENST00000431352 PDE3BQ13370 1112 aa19.95■□□□□ 0.78
SEC13-211ENST00000431352 BARGINQ6ZT62 677 aa19.95■□□□□ 0.78
SEC13-211ENST00000431352 TCP11L2Q8N4U5 519 aa19.95■□□□□ 0.78
SEC13-211ENST00000431352 DISP2A7MBM2 1401 aa19.94■□□□□ 0.78
SEC13-211ENST00000431352 COL5A2P05997 1499 aaPredicted RBP19.94■□□□□ 0.78
SEC13-211ENST00000431352 EZH2Q15910 746 aaKnown RBP19.94■□□□□ 0.78
SEC13-211ENST00000431352 LRP5O75197 1615 aa19.94■□□□□ 0.78
SEC13-211ENST00000431352 R3HDM1Q15032 1099 aaKnown RBP19.93■□□□□ 0.78
SEC13-211ENST00000431352 BRD4O60885 1362 aaPredicted RBP19.93■□□□□ 0.78
SEC13-211ENST00000431352 SLIT3O75094 1523 aa19.92■□□□□ 0.78
SEC13-211ENST00000431352 PIK3C2AO00443 1686 aa19.92■□□□□ 0.78
SEC13-211ENST00000431352 SOX12O15370 315 aa19.91■□□□□ 0.78
SEC13-211ENST00000431352 APBA3O96018 575 aa19.91■□□□□ 0.78
SEC13-211ENST00000431352 CRB1P82279 1406 aa19.89■□□□□ 0.77
SEC13-211ENST00000431352 CAMKK2Q96RR4 588 aa19.88■□□□□ 0.77
SEC13-211ENST00000431352 AATKQ6ZMQ8 1374 aa19.87■□□□□ 0.77
SEC13-211ENST00000431352 THRAP3Q9Y2W1 955 aaKnown RBP19.87■□□□□ 0.77
SEC13-211ENST00000431352 PARP4Q9UKK3 1724 aaKnown RBP19.87■□□□□ 0.77
SEC13-211ENST00000431352 TTC21BQ7Z4L5 1316 aa19.86■□□□□ 0.77
SEC13-211ENST00000431352 TOM1L2Q6ZVM7 507 aa19.86■□□□□ 0.77
SEC13-211ENST00000431352 CPSF1Q10570 1443 aaKnown RBP19.85■□□□□ 0.77
SEC13-211ENST00000431352 AKAP12Q02952 1782 aa19.85■□□□□ 0.77
SEC13-211ENST00000431352 LRRC37A3O60309 1634 aa19.84■□□□□ 0.77
SEC13-211ENST00000431352 KTN1Q86UP2 1357 aaKnown RBP19.83■□□□□ 0.77
SEC13-211ENST00000431352 PARD3Q8TEW0 1356 aa19.83■□□□□ 0.77
SEC13-211ENST00000431352 COL18A1P39060 1754 aa19.83■□□□□ 0.76
SEC13-211ENST00000431352 RREB1Q92766 1687 aa19.82■□□□□ 0.76
SEC13-211ENST00000431352 ZNF692Q9BU19 519 aaPredicted RBP19.82■□□□□ 0.76
SEC13-211ENST00000431352 AXIN2Q9Y2T1 843 aa19.82■□□□□ 0.76
SEC13-211ENST00000431352 OVOS2A0A0G2JMS6 1433 aa19.82■□□□□ 0.76
SEC13-211ENST00000431352 OVOS2A0A0J9YW53 1432 aa19.82■□□□□ 0.76
SEC13-211ENST00000431352 OVOS2Q6IE36 1432 aa19.82■□□□□ 0.76
SEC13-211ENST00000431352 NUP188Q5SRE5 1749 aa19.82■□□□□ 0.76
SEC13-211ENST00000431352 CSB-PGBD3P0DP91 1061 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms