RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 USP35Q9P2H5 1018 aa14.75□□□□□ -0.05
SMPD4-205ENST00000431183 ZFYVE9O95405 1425 aa14.74□□□□□ -0.05
SMPD4-205ENST00000431183 PTPRUQ92729 1446 aa14.74□□□□□ -0.05
SMPD4-205ENST00000431183 ADAMTS13Q76LX8 1427 aa14.74□□□□□ -0.05
SMPD4-205ENST00000431183 PPLO60437 1756 aa14.74□□□□□ -0.05
SMPD4-205ENST00000431183 TTC21BQ7Z4L5 1316 aa14.74□□□□□ -0.05
SMPD4-205ENST00000431183 TULP4Q9NRJ4 1543 aa14.73□□□□□ -0.05
SMPD4-205ENST00000431183 PLEKHG1Q9ULL1 1385 aa14.73□□□□□ -0.05
SMPD4-205ENST00000431183 FAM83GA6ND36 823 aa14.73□□□□□ -0.05
SMPD4-205ENST00000431183 ZNF428Q96B54 188 aa14.73□□□□□ -0.05
SMPD4-205ENST00000431183 SPATA31D1Q6ZQQ2 1576 aa14.73□□□□□ -0.05
SMPD4-205ENST00000431183 PIP4K2BP78356 416 aa14.72□□□□□ -0.05
SMPD4-205ENST00000431183 MIS18AQ9NYP9 233 aa14.72□□□□□ -0.05
SMPD4-205ENST00000431183 ZNF335Q9H4Z2 1342 aaPredicted RBP14.72□□□□□ -0.05
SMPD4-205ENST00000431183 NECTIN2Q92692 538 aa14.72□□□□□ -0.05
SMPD4-205ENST00000431183 NRXN1Q9ULB1 1477 aa14.72□□□□□ -0.05
SMPD4-205ENST00000431183 BCAR3O75815 825 aa14.72□□□□□ -0.05
SMPD4-205ENST00000431183 CSB-PGBD3P0DP91 1061 aa14.72□□□□□ -0.05
SMPD4-205ENST00000431183 CHRNA2Q15822 529 aa14.71□□□□□ -0.05
SMPD4-205ENST00000431183 EXOC6Q8TAG9 804 aa14.71□□□□□ -0.05
SMPD4-205ENST00000431183 SKAP1Q86WV1 359 aa14.71□□□□□ -0.05
SMPD4-205ENST00000431183 PHACTR3Q96KR7 559 aa14.71□□□□□ -0.05
SMPD4-205ENST00000431183 RUNDC1Q96C34 613 aa14.7□□□□□ -0.06
SMPD4-205ENST00000431183 ZNF692Q9BU19 519 aaPredicted RBP14.7□□□□□ -0.06
SMPD4-205ENST00000431183 NLRP1Q9C000 1473 aa14.7□□□□□ -0.06
SMPD4-205ENST00000431183 FER1L4A9Z1Z3 1794 aa14.7□□□□□ -0.06
SMPD4-205ENST00000431183 QRICH2Q9H0J4 1663 aa14.7□□□□□ -0.06
SMPD4-205ENST00000431183 C20orf194Q5TEA3 1177 aa14.7□□□□□ -0.06
SMPD4-205ENST00000431183 ZC3H13Q5T200 1668 aaKnown RBP14.69□□□□□ -0.06
SMPD4-205ENST00000431183 KDM5AP29375 1690 aaKnown RBP14.69□□□□□ -0.06
SMPD4-205ENST00000431183 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
SMPD4-205ENST00000431183 WWC1Q8IX03 1113 aa14.67□□□□□ -0.06
SMPD4-205ENST00000431183 SBNO2Q9Y2G9 1366 aa14.67□□□□□ -0.06
SMPD4-205ENST00000431183 MCM10Q7L590 875 aa14.67□□□□□ -0.06
SMPD4-205ENST00000431183 LRRC59Q96AG4 307 aaKnown RBP14.67□□□□□ -0.06
SMPD4-205ENST00000431183 MSH5O43196 834 aa14.66□□□□□ -0.06
SMPD4-205ENST00000431183 KRT28Q7Z3Y7 464 aa14.66□□□□□ -0.06
SMPD4-205ENST00000431183 C3P01024 1663 aa14.66□□□□□ -0.06
SMPD4-205ENST00000431183 NPHP4O75161 1426 aaPredicted RBP14.65□□□□□ -0.06
SMPD4-205ENST00000431183 SETD1BQ9UPS6 1966 aaKnown RBP14.65□□□□□ -0.06
SMPD4-205ENST00000431183 MAP3K19Q56UN5 1328 aa14.64□□□□□ -0.07
SMPD4-205ENST00000431183 TMEM94Q12767 1356 aa14.64□□□□□ -0.07
SMPD4-205ENST00000431183 TMPOP42166 694 aaKnown RBP14.64□□□□□ -0.07
SMPD4-205ENST00000431183 CRBNQ96SW2 442 aa14.64□□□□□ -0.07
SMPD4-205ENST00000431183 NLRP2Q9NX02 1062 aa14.64□□□□□ -0.07
SMPD4-205ENST00000431183 EIF4A2Q14240 407 aaKnown RBP14.63□□□□□ -0.07
SMPD4-205ENST00000431183 STRN4Q9NRL3 753 aa14.63□□□□□ -0.07
SMPD4-205ENST00000431183 PANK1Q8TE04 598 aa14.63□□□□□ -0.07
SMPD4-205ENST00000431183 TNNQ9UQP3 1299 aa14.63□□□□□ -0.07
SMPD4-205ENST00000431183 EXOSC9Q06265 439 aaKnown RBP14.62□□□□□ -0.07
SMPD4-205ENST00000431183 C19orf44Q9H6X5 657 aa14.62□□□□□ -0.07
SMPD4-205ENST00000431183 RRP1P56182 461 aaKnown RBP14.62□□□□□ -0.07
SMPD4-205ENST00000431183 AEBP2Q6ZN18 517 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-205ENST00000431183 COG6Q9Y2V7 657 aa14.62□□□□□ -0.07
SMPD4-205ENST00000431183 NUTM2BA6NNL0 878 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-205ENST00000431183 NUTM2EB1AL46 878 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-205ENST00000431183 KRT24Q2M2I5 525 aa14.61□□□□□ -0.07
SMPD4-205ENST00000431183 NUTM2AQ8IVF1 878 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-205ENST00000431183 REREQ9P2R6 1566 aa14.61□□□□□ -0.07
SMPD4-205ENST00000431183 SMC4Q9NTJ3 1288 aa14.6□□□□□ -0.07
SMPD4-205ENST00000431183 RTF1Q92541 710 aaKnown RBP14.6□□□□□ -0.07
SMPD4-205ENST00000431183 ANO8Q9HCE9 1232 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-205ENST00000431183 SETBP1Q9Y6X0 1596 aa14.6□□□□□ -0.07
SMPD4-205ENST00000431183 DUSP27Q5VZP5 1158 aa14.6□□□□□ -0.07
SMPD4-205ENST00000431183 CEP170BQ9Y4F5 1589 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-205ENST00000431183 IFT172Q9UG01 1749 aa14.58□□□□□ -0.07
SMPD4-205ENST00000431183 ARHGEF28Q8N1W1 1705 aaKnown RBP14.58□□□□□ -0.08
SMPD4-205ENST00000431183 PLEKHG3A1L390 1219 aa14.58□□□□□ -0.08
SMPD4-205ENST00000431183 SLFN5Q08AF3 891 aa14.58□□□□□ -0.08
SMPD4-205ENST00000431183 E9PSI1 815 aa14.58□□□□□ -0.08
SMPD4-205ENST00000431183 FTSJ3Q8IY81 847 aaKnown RBP14.58□□□□□ -0.08
SMPD4-205ENST00000431183 PPP4R2Q9NY27 417 aa14.58□□□□□ -0.08
SMPD4-205ENST00000431183 RGS3P49796 1198 aa14.57□□□□□ -0.08
SMPD4-205ENST00000431183 UBR1Q8IWV7 1749 aa14.57□□□□□ -0.08
SMPD4-205ENST00000431183 ADAMTS2O95450 1211 aa14.57□□□□□ -0.08
SMPD4-205ENST00000431183 ARXQ96QS3 562 aa14.57□□□□□ -0.08
SMPD4-205ENST00000431183 CPS1P31327 1500 aa14.57□□□□□ -0.08
SMPD4-205ENST00000431183 NPM2Q86SE8 214 aaKnown RBP14.56□□□□□ -0.08
SMPD4-205ENST00000431183 GCP02774 474 aa14.56□□□□□ -0.08
SMPD4-205ENST00000431183 EYA1Q99502 592 aa14.56□□□□□ -0.08
SMPD4-205ENST00000431183 CCDC9Q9Y3X0 531 aaKnown RBP14.56□□□□□ -0.08
SMPD4-205ENST00000431183 PDE3BQ13370 1112 aa14.55□□□□□ -0.08
SMPD4-205ENST00000431183 IL13P35225 146 aa14.55□□□□□ -0.08
SMPD4-205ENST00000431183 PUS7Q96PZ0 661 aaKnown RBP14.55□□□□□ -0.08
SMPD4-205ENST00000431183 LAMC1P11047 1609 aa14.55□□□□□ -0.08
SMPD4-205ENST00000431183 POLR3AO14802 1390 aaPredicted RBP14.54□□□□□ -0.08
SMPD4-205ENST00000431183 EDC4Q6P2E9 1401 aaKnown RBP14.54□□□□□ -0.08
SMPD4-205ENST00000431183 CD163L1Q9NR16 1453 aa14.54□□□□□ -0.08
SMPD4-205ENST00000431183 EIF2S2P20042 333 aaKnown RBP14.54□□□□□ -0.08
SMPD4-205ENST00000431183 CADPS2Q86UW7 1296 aa14.54□□□□□ -0.08
SMPD4-205ENST00000431183 MYH16Q9H6N6 1097 aa14.54□□□□□ -0.08
SMPD4-205ENST00000431183 PRDM11Q9NQV5 511 aa14.54□□□□□ -0.08
SMPD4-205ENST00000431183 KAT6BQ8WYB5 2073 aa14.53□□□□□ -0.08
SMPD4-205ENST00000431183 FAM135BQ49AJ0 1406 aa14.53□□□□□ -0.08
SMPD4-205ENST00000431183 FCHSD2O94868 740 aa14.53□□□□□ -0.08
SMPD4-205ENST00000431183 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.53□□□□□ -0.08
SMPD4-205ENST00000431183 RSPH6AQ9H0K4 717 aa14.53□□□□□ -0.08
SMPD4-205ENST00000431183 NINLQ9Y2I6 1382 aa14.53□□□□□ -0.08
SMPD4-205ENST00000431183 ATP7BP35670 1465 aa14.53□□□□□ -0.08
SMPD4-205ENST00000431183 APBB1O00213 710 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms