RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 CABP1Q9NZU7 370 aa13.9□□□□□ -0.18
HDAC6-207ENST00000430858 CDK12Q9NYV4 1490 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-207ENST00000430858 ALS2Q96Q42 1657 aa13.89□□□□□ -0.19
HDAC6-207ENST00000430858 BRD4O60885 1362 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-207ENST00000430858 ATAD2Q6PL18 1390 aa13.89□□□□□ -0.19
HDAC6-207ENST00000430858 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
HDAC6-207ENST00000430858 BCL9LQ86UU0 1499 aa13.88□□□□□ -0.19
HDAC6-207ENST00000430858 UNC5CLQ8IV45 518 aa13.88□□□□□ -0.19
HDAC6-207ENST00000430858 SLIT2O94813 1529 aa13.88□□□□□ -0.19
HDAC6-207ENST00000430858 ATRNO75882 1429 aa13.88□□□□□ -0.19
HDAC6-207ENST00000430858 MARF1Q9Y4F3 1742 aaKnown RBP13.87□□□□□ -0.19
HDAC6-207ENST00000430858 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
HDAC6-207ENST00000430858 CCER1Q8TC90 406 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-207ENST00000430858 ABTB2Q8N961 1025 aa13.86□□□□□ -0.19
HDAC6-207ENST00000430858 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-207ENST00000430858 USP6P35125 1406 aa13.85□□□□□ -0.19
HDAC6-207ENST00000430858 ST20-MTHFSA0A0A6YYL1 179 aa13.85□□□□□ -0.19
HDAC6-207ENST00000430858 FAM83GA6ND36 823 aa13.85□□□□□ -0.19
HDAC6-207ENST00000430858 PUS7Q96PZ0 661 aaKnown RBP13.85□□□□□ -0.19
HDAC6-207ENST00000430858 ABCA3Q99758 1704 aa13.84□□□□□ -0.19
HDAC6-207ENST00000430858 NLRP13Q86W25 1043 aa13.84□□□□□ -0.19
HDAC6-207ENST00000430858 GJD4Q96KN9 370 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-207ENST00000430858 RGS12O14924 1447 aa13.83□□□□□ -0.2
HDAC6-207ENST00000430858 NUTM2GQ5VZR2 741 aa13.83□□□□□ -0.2
HDAC6-207ENST00000430858 TESK2Q96S53 571 aa13.83□□□□□ -0.2
HDAC6-207ENST00000430858 SSH2Q76I76 1423 aa13.82□□□□□ -0.2
HDAC6-207ENST00000430858 VPS72Q15906 364 aa13.82□□□□□ -0.2
HDAC6-207ENST00000430858 PRDM11Q9NQV5 511 aa13.82□□□□□ -0.2
HDAC6-207ENST00000430858 USP19O94966 1318 aa13.82□□□□□ -0.2
HDAC6-207ENST00000430858 USP47Q96K76 1375 aa13.82□□□□□ -0.2
HDAC6-207ENST00000430858 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
HDAC6-207ENST00000430858 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.81□□□□□ -0.2
HDAC6-207ENST00000430858 BTG4Q9NY30 223 aa13.81□□□□□ -0.2
HDAC6-207ENST00000430858 NLRP6P59044 892 aa13.8□□□□□ -0.2
HDAC6-207ENST00000430858 ZC3H6P61129 1189 aaKnown RBP13.8□□□□□ -0.2
HDAC6-207ENST00000430858 TMC1Q8TDI8 760 aa13.8□□□□□ -0.2
HDAC6-207ENST00000430858 NWD2Q9ULI1 1742 aa13.8□□□□□ -0.2
HDAC6-207ENST00000430858 CRYBG1Q9Y4K1 1723 aa13.8□□□□□ -0.2
HDAC6-207ENST00000430858 TTC21AQ8NDW8 1320 aa13.8□□□□□ -0.2
HDAC6-207ENST00000430858 KIAA0232Q92628 1395 aa13.8□□□□□ -0.2
HDAC6-207ENST00000430858 GCP02774 474 aa13.79□□□□□ -0.2
HDAC6-207ENST00000430858 CCDC9Q9Y3X0 531 aaKnown RBP13.79□□□□□ -0.2
HDAC6-207ENST00000430858 TTC21BQ7Z4L5 1316 aa13.79□□□□□ -0.2
HDAC6-207ENST00000430858 KTN1Q86UP2 1357 aaKnown RBP13.79□□□□□ -0.2
HDAC6-207ENST00000430858 PLCH1Q4KWH8 1693 aa13.79□□□□□ -0.2
HDAC6-207ENST00000430858 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
HDAC6-207ENST00000430858 TMF1P82094 1093 aa13.78□□□□□ -0.2
HDAC6-207ENST00000430858 HDGFL2Q7Z4V5 671 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-207ENST00000430858 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
HDAC6-207ENST00000430858 CPDO75976 1380 aa13.78□□□□□ -0.2
HDAC6-207ENST00000430858 NINLQ9Y2I6 1382 aa13.78□□□□□ -0.2
HDAC6-207ENST00000430858 PHRF1Q9P1Y6 1649 aaKnown RBP13.78□□□□□ -0.2
HDAC6-207ENST00000430858 CHRNA2Q15822 529 aa13.77□□□□□ -0.21
HDAC6-207ENST00000430858 TERF2IPQ9NYB0 399 aa13.77□□□□□ -0.21
HDAC6-207ENST00000430858 GLI3P10071 1580 aa13.76□□□□□ -0.21
HDAC6-207ENST00000430858 NRKQ7Z2Y5 1582 aa13.76□□□□□ -0.21
HDAC6-207ENST00000430858 UPF1Q92900 1129 aaKnown RBP eCLIP13.76□□□□□ -0.21
HDAC6-207ENST00000430858 CD163L1Q9NR16 1453 aa13.75□□□□□ -0.21
HDAC6-207ENST00000430858 ONECUT3O60422 494 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-207ENST00000430858 CDCA8Q53HL2 280 aa13.75□□□□□ -0.21
HDAC6-207ENST00000430858 KCNH5Q8NCM2 988 aa13.75□□□□□ -0.21
HDAC6-207ENST00000430858 AKAP12Q02952 1782 aa13.75□□□□□ -0.21
HDAC6-207ENST00000430858 SLIT3O75094 1523 aa13.74□□□□□ -0.21
HDAC6-207ENST00000430858 NRAPQ86VF7 1730 aa13.74□□□□□ -0.21
HDAC6-207ENST00000430858 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
HDAC6-207ENST00000430858 A0A1W2PP64 1363 aa13.73□□□□□ -0.21
HDAC6-207ENST00000430858 PIK3C2AO00443 1686 aa13.73□□□□□ -0.21
HDAC6-207ENST00000430858 SPATA31A5Q5VU36 1347 aa13.73□□□□□ -0.21
HDAC6-207ENST00000430858 SPATA31A7Q8IWB4 1347 aa13.73□□□□□ -0.21
HDAC6-207ENST00000430858 EVA1CP58658 441 aa13.73□□□□□ -0.21
HDAC6-207ENST00000430858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.73□□□□□ -0.21
HDAC6-207ENST00000430858 SEPT12Q8IYM1 358 aa13.73□□□□□ -0.21
HDAC6-207ENST00000430858 STRN4Q9NRL3 753 aa13.73□□□□□ -0.21
HDAC6-207ENST00000430858 USP31Q70CQ4 1352 aa13.72□□□□□ -0.21
HDAC6-207ENST00000430858 MON2Q7Z3U7 1717 aa13.72□□□□□ -0.21
HDAC6-207ENST00000430858 AATKQ6ZMQ8 1374 aa13.71□□□□□ -0.21
HDAC6-207ENST00000430858 FAM98CQ17RN3 349 aaKnown RBP13.71□□□□□ -0.21
HDAC6-207ENST00000430858 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.22
HDAC6-207ENST00000430858 SPATA31A1Q5TZJ5 1347 aa13.7□□□□□ -0.22
HDAC6-207ENST00000430858 CAMTA1Q9Y6Y1 1673 aa13.7□□□□□ -0.22
HDAC6-207ENST00000430858 A0A0G2JS52 829 aa13.7□□□□□ -0.22
HDAC6-207ENST00000430858 EIF4G2P78344 907 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC6-207ENST00000430858 MYT1Q01538 1121 aa13.7□□□□□ -0.22
HDAC6-207ENST00000430858 ARHGEF25Q86VW2 580 aa13.7□□□□□ -0.22
HDAC6-207ENST00000430858 NME9Q86XW9 330 aa13.7□□□□□ -0.22
HDAC6-207ENST00000430858 LMO7Q8WWI1 1683 aa13.69□□□□□ -0.22
HDAC6-207ENST00000430858 ZBTB7CA1YPR0 619 aa13.69□□□□□ -0.22
HDAC6-207ENST00000430858 SOX12O15370 315 aa13.68□□□□□ -0.22
HDAC6-207ENST00000430858 LARP1Q6PKG0 1096 aaKnown RBP13.68□□□□□ -0.22
HDAC6-207ENST00000430858 KRT27Q7Z3Y8 459 aa13.68□□□□□ -0.22
HDAC6-207ENST00000430858 CCDC125Q86Z20 511 aa13.68□□□□□ -0.22
HDAC6-207ENST00000430858 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
HDAC6-207ENST00000430858 COL5A2P05997 1499 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-207ENST00000430858 BARGINQ6ZT62 677 aa13.67□□□□□ -0.22
HDAC6-207ENST00000430858 THRAP3Q9Y2W1 955 aaKnown RBP13.67□□□□□ -0.22
HDAC6-207ENST00000430858 NFAT5O94916 1531 aa13.66□□□□□ -0.22
HDAC6-207ENST00000430858 TCP11L2Q8N4U5 519 aa13.66□□□□□ -0.22
HDAC6-207ENST00000430858 USP35Q9P2H5 1018 aa13.66□□□□□ -0.22
HDAC6-207ENST00000430858 AXIN2Q9Y2T1 843 aa13.66□□□□□ -0.22
HDAC6-207ENST00000430858 OVOS2A0A0J9YW53 1432 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms