RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 ELL2O00472 640 aaPredicted RBP19.47■□□□□ 0.71
RIF1-204ENST00000430328 MYZAPP0CAP1 466 aa19.47■□□□□ 0.71
RIF1-204ENST00000430328 SEPT6Q14141 434 aa19.47■□□□□ 0.71
RIF1-204ENST00000430328 TAF4BQ92750 862 aa19.47■□□□□ 0.71
RIF1-204ENST00000430328 COG6Q9Y2V7 657 aa19.47■□□□□ 0.71
RIF1-204ENST00000430328 SMC1AQ14683 1233 aaKnown RBP19.47■□□□□ 0.71
RIF1-204ENST00000430328 PLIN1O60240 522 aa19.46■□□□□ 0.71
RIF1-204ENST00000430328 RNF187Q5TA31 235 aaPredicted RBP19.46■□□□□ 0.71
RIF1-204ENST00000430328 TRIM21P19474 475 aaKnown RBP19.46■□□□□ 0.71
RIF1-204ENST00000430328 RRP7AQ9Y3A4 280 aaKnown RBP19.46■□□□□ 0.71
RIF1-204ENST00000430328 CLGNO14967 610 aa19.46■□□□□ 0.71
RIF1-204ENST00000430328 FYB1O15117 783 aa19.46■□□□□ 0.71
RIF1-204ENST00000430328 WASHC4Q2M389 1173 aa19.46■□□□□ 0.71
RIF1-204ENST00000430328 KIF15Q9NS87 1388 aa19.45■□□□□ 0.7
RIF1-204ENST00000430328 UBE4AQ14139 1066 aa19.45■□□□□ 0.7
RIF1-204ENST00000430328 TNMDQ9H2S6 317 aa19.44■□□□□ 0.7
RIF1-204ENST00000430328 PRPF40AO75400 957 aaKnown RBP19.44■□□□□ 0.7
RIF1-204ENST00000430328 C6orf163Q5TEZ5 329 aa19.44■□□□□ 0.7
RIF1-204ENST00000430328 STK38Q15208 465 aa19.44■□□□□ 0.7
RIF1-204ENST00000430328 EPB41L2O43491 1005 aaKnown RBP19.43■□□□□ 0.7
RIF1-204ENST00000430328 ATP2B1P20020 1258 aa19.43■□□□□ 0.7
RIF1-204ENST00000430328 SLC3A2P08195 630 aaKnown RBP19.43■□□□□ 0.7
RIF1-204ENST00000430328 IFFO1Q0D2I5 559 aa19.43■□□□□ 0.7
RIF1-204ENST00000430328 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.43■□□□□ 0.7
RIF1-204ENST00000430328 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.43■□□□□ 0.7
RIF1-204ENST00000430328 V9GYY5 206 aaPredicted RBP19.43■□□□□ 0.7
RIF1-204ENST00000430328 SSR1P43307 286 aaKnown RBP19.43■□□□□ 0.7
RIF1-204ENST00000430328 IMMTQ16891 758 aaKnown RBP19.43■□□□□ 0.7
RIF1-204ENST00000430328 CNTROBQ8N137 903 aa19.43■□□□□ 0.7
RIF1-204ENST00000430328 MTMR7Q9Y216 660 aa19.43■□□□□ 0.7
RIF1-204ENST00000430328 ZNF397Q8NF99 534 aaPredicted RBP19.42■□□□□ 0.7
RIF1-204ENST00000430328 PUS7Q96PZ0 661 aaKnown RBP19.42■□□□□ 0.7
RIF1-204ENST00000430328 EXOC6Q8TAG9 804 aa19.42■□□□□ 0.7
RIF1-204ENST00000430328 EIF2S2P20042 333 aaKnown RBP19.42■□□□□ 0.7
RIF1-204ENST00000430328 ZHX3Q9H4I2 956 aa19.42■□□□□ 0.7
RIF1-204ENST00000430328 GIGYF2Q6Y7W6 1299 aaKnown RBP19.42■□□□□ 0.7
RIF1-204ENST00000430328 BRPF3Q9ULD4 1205 aa19.41■□□□□ 0.7
RIF1-204ENST00000430328 POTEJP0CG39 1038 aa19.41■□□□□ 0.7
RIF1-204ENST00000430328 SETD5Q9C0A6 1442 aa19.41■□□□□ 0.7
RIF1-204ENST00000430328 TNNT1P13805 278 aa19.41■□□□□ 0.7
RIF1-204ENST00000430328 EVA1CP58658 441 aa19.41■□□□□ 0.7
RIF1-204ENST00000430328 FIBPO43427 364 aa19.4■□□□□ 0.7
RIF1-204ENST00000430328 ARHGAP29Q52LW3 1261 aa19.4■□□□□ 0.7
RIF1-204ENST00000430328 API5Q9BZZ5 524 aaKnown RBP19.4■□□□□ 0.7
RIF1-204ENST00000430328 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
RIF1-204ENST00000430328 GSTTP1A0A1W2PQM5 241 aa19.4■□□□□ 0.7
RIF1-204ENST00000430328 KIF2AO00139 706 aaPredicted RBP19.39■□□□□ 0.7
RIF1-204ENST00000430328 CEBPZQ03701 1054 aaKnown RBP19.39■□□□□ 0.7
RIF1-204ENST00000430328 SPECC1LQ69YQ0 1117 aa19.39■□□□□ 0.7
RIF1-204ENST00000430328 FHAD1B1AJZ9 1412 aa19.39■□□□□ 0.7
RIF1-204ENST00000430328 SOGA3Q5TF21 947 aa19.39■□□□□ 0.69
RIF1-204ENST00000430328 CGNQ9P2M7 1197 aaKnown RBP19.39■□□□□ 0.69
RIF1-204ENST00000430328 HOOK3Q86VS8 718 aa19.39■□□□□ 0.69
RIF1-204ENST00000430328 MYBBP1AQ9BQG0 1328 aaKnown RBP19.39■□□□□ 0.69
RIF1-204ENST00000430328 PRKCSHP14314 528 aaPredicted RBP19.39■□□□□ 0.69
RIF1-204ENST00000430328 DZIP1LQ8IYY4 767 aaKnown RBP19.39■□□□□ 0.69
RIF1-204ENST00000430328 ZNF526Q8TF50 670 aaPredicted RBP19.39■□□□□ 0.69
RIF1-204ENST00000430328 KDM4AO75164 1064 aa19.39■□□□□ 0.69
RIF1-204ENST00000430328 PPM1FP49593 454 aaPredicted RBP19.39■□□□□ 0.69
RIF1-204ENST00000430328 POLR3GO15318 223 aaPredicted RBP19.38■□□□□ 0.69
RIF1-204ENST00000430328 MNAT1P51948 309 aa19.38■□□□□ 0.69
RIF1-204ENST00000430328 GOPCQ9HD26 462 aa19.38■□□□□ 0.69
RIF1-204ENST00000430328 GTF2A1P52655 376 aaPredicted RBP19.38■□□□□ 0.69
RIF1-204ENST00000430328 TIGD1Q96MW7 591 aa19.38■□□□□ 0.69
RIF1-204ENST00000430328 PKD2Q13563 968 aa19.38■□□□□ 0.69
RIF1-204ENST00000430328 DNAI2Q9GZS0 605 aa19.38■□□□□ 0.69
RIF1-204ENST00000430328 CDC45O75419 566 aa19.38■□□□□ 0.69
RIF1-204ENST00000430328 FERP16591 822 aa19.37■□□□□ 0.69
RIF1-204ENST00000430328 NEUROD6Q96NK8 337 aa19.37■□□□□ 0.69
RIF1-204ENST00000430328 FAM114A1Q8IWE2 563 aa19.37■□□□□ 0.69
RIF1-204ENST00000430328 NAP1L3Q99457 506 aaPredicted RBP19.37■□□□□ 0.69
RIF1-204ENST00000430328 ME1P48163 572 aa19.37■□□□□ 0.69
RIF1-204ENST00000430328 CCDC160A6NGH7 325 aa19.37■□□□□ 0.69
RIF1-204ENST00000430328 LNPKQ9C0E8 428 aa19.36■□□□□ 0.69
RIF1-204ENST00000430328 CBX1P83916 185 aa19.36■□□□□ 0.69
RIF1-204ENST00000430328 GGT6Q6P531 493 aa19.36■□□□□ 0.69
RIF1-204ENST00000430328 KAT6BQ8WYB5 2073 aa19.36■□□□□ 0.69
RIF1-204ENST00000430328 DNAJC2Q99543 621 aaKnown RBP19.36■□□□□ 0.69
RIF1-204ENST00000430328 HIP1O00291 1037 aa19.35■□□□□ 0.69
RIF1-204ENST00000430328 CASQ1P31415 396 aa19.35■□□□□ 0.69
RIF1-204ENST00000430328 DNAAF4Q8WXU2 420 aa19.35■□□□□ 0.69
RIF1-204ENST00000430328 FKBP5Q13451 457 aaPredicted RBP19.35■□□□□ 0.69
RIF1-204ENST00000430328 WDR66Q8TBY9 1149 aa19.35■□□□□ 0.69
RIF1-204ENST00000430328 TBC1D2BQ9UPU7 963 aa19.35■□□□□ 0.69
RIF1-204ENST00000430328 BMP2KQ9NSY1 1161 aaPredicted RBP19.35■□□□□ 0.69
RIF1-204ENST00000430328 PRDM10Q9NQV6 1147 aa19.35■□□□□ 0.69
RIF1-204ENST00000430328 ZBED9Q6R2W3 1325 aa19.34■□□□□ 0.69
RIF1-204ENST00000430328 DDX46Q7L014 1031 aaKnown RBP19.34■□□□□ 0.69
RIF1-204ENST00000430328 GRPEL1Q9HAV7 217 aa19.34■□□□□ 0.69
RIF1-204ENST00000430328 MATR3P43243 847 aaKnown RBP eCLIP19.34■□□□□ 0.69
RIF1-204ENST00000430328 SMTNL1A8MU46 457 aa19.34■□□□□ 0.69
RIF1-204ENST00000430328 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
RIF1-204ENST00000430328 SPECC1Q5M775 1068 aa19.34■□□□□ 0.69
RIF1-204ENST00000430328 ERC1Q8IUD2 1116 aa19.34■□□□□ 0.69
RIF1-204ENST00000430328 TAOK3Q9H2K8 898 aa19.34■□□□□ 0.69
RIF1-204ENST00000430328 KIF18AQ8NI77 898 aa19.33■□□□□ 0.69
RIF1-204ENST00000430328 NECTIN2Q92692 538 aa19.33■□□□□ 0.68
RIF1-204ENST00000430328 KIF3CO14782 793 aa19.32■□□□□ 0.68
RIF1-204ENST00000430328 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
RIF1-204ENST00000430328 KIF5CO60282 957 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms