RNA–Protein interactions for RNA: ENST00000429812.5

PDLIM2-210, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-210ENST00000429812 MYT1Q01538 1121 aa25.83■■□□□ 1.73
PDLIM2-210ENST00000429812 FAM98CQ17RN3 349 aaKnown RBP25.82■■□□□ 1.72
PDLIM2-210ENST00000429812 DEFB132Q7Z7B7 95 aa25.81■■□□□ 1.72
PDLIM2-210ENST00000429812 ONECUT3O60422 494 aaPredicted RBP25.8■■□□□ 1.72
PDLIM2-210ENST00000429812 CCDC125Q86Z20 511 aa25.8■■□□□ 1.72
PDLIM2-210ENST00000429812 ACEP12821 1306 aa25.8■■□□□ 1.72
PDLIM2-210ENST00000429812 NRAPQ86VF7 1730 aa25.8■■□□□ 1.72
PDLIM2-210ENST00000429812 CHRNA2Q15822 529 aa25.79■■□□□ 1.72
PDLIM2-210ENST00000429812 SIN3AQ96ST3 1273 aa25.79■■□□□ 1.72
PDLIM2-210ENST00000429812 PRDM11Q9NQV5 511 aa25.79■■□□□ 1.72
PDLIM2-210ENST00000429812 KRT27Q7Z3Y8 459 aa25.78■■□□□ 1.72
PDLIM2-210ENST00000429812 ITSN1Q15811 1721 aa25.77■■□□□ 1.72
PDLIM2-210ENST00000429812 CRYBG1Q9Y4K1 1723 aa25.77■■□□□ 1.72
PDLIM2-210ENST00000429812 SRCAPQ6ZRS2 3230 aa25.77■■□□□ 1.72
PDLIM2-210ENST00000429812 NBPF8Q3BBV2 869 aa25.77■■□□□ 1.72
PDLIM2-210ENST00000429812 ZRANB1Q9UGI0 708 aa25.77■■□□□ 1.72
PDLIM2-210ENST00000429812 BLMP54132 1417 aaPredicted RBP25.77■■□□□ 1.72
PDLIM2-210ENST00000429812 KIAA1210Q9ULL0 1709 aa25.77■■□□□ 1.72
PDLIM2-210ENST00000429812 COL14A1Q05707 1796 aaKnown RBP25.77■■□□□ 1.72
PDLIM2-210ENST00000429812 ZC3H6P61129 1189 aaKnown RBP25.76■■□□□ 1.71
PDLIM2-210ENST00000429812 L3MBTL2Q969R5 705 aa25.76■■□□□ 1.71
PDLIM2-210ENST00000429812 CCDC61Q9Y6R9 512 aa25.76■■□□□ 1.71
PDLIM2-210ENST00000429812 KIAA0232Q92628 1395 aa25.75■■□□□ 1.71
PDLIM2-210ENST00000429812 FAM182BQ5T319 152 aa25.75■■□□□ 1.71
PDLIM2-210ENST00000429812 CABP2Q9NPB3 220 aa25.75■■□□□ 1.71
PDLIM2-210ENST00000429812 SRPK2P78362 688 aaKnown RBP25.74■■□□□ 1.71
PDLIM2-210ENST00000429812 POLR3AO14802 1390 aaPredicted RBP25.73■■□□□ 1.71
PDLIM2-210ENST00000429812 CENPJQ9HC77 1338 aaPredicted RBP25.73■■□□□ 1.71
PDLIM2-210ENST00000429812 TOPAZ1Q8N9V7 1692 aa25.73■■□□□ 1.71
PDLIM2-210ENST00000429812 SPATA31A5Q5VU36 1347 aa25.72■■□□□ 1.71
PDLIM2-210ENST00000429812 SPATA31A7Q8IWB4 1347 aa25.72■■□□□ 1.71
PDLIM2-210ENST00000429812 PLEKHG3A1L390 1219 aa25.72■■□□□ 1.71
PDLIM2-210ENST00000429812 NEUROD1Q13562 356 aa25.72■■□□□ 1.71
PDLIM2-210ENST00000429812 STRN4Q9NRL3 753 aa25.72■■□□□ 1.71
PDLIM2-210ENST00000429812 SF3B2Q13435 895 aaKnown RBP25.7■■□□□ 1.7
PDLIM2-210ENST00000429812 PHRF1Q9P1Y6 1649 aaKnown RBP25.68■■□□□ 1.7
PDLIM2-210ENST00000429812 ABTB2Q8N961 1025 aa25.68■■□□□ 1.7
PDLIM2-210ENST00000429812 PPIP5K1Q6PFW1 1433 aa25.68■■□□□ 1.7
PDLIM2-210ENST00000429812 USP35Q9P2H5 1018 aa25.65■■□□□ 1.7
PDLIM2-210ENST00000429812 CABP1Q9NZU7 370 aa25.64■■□□□ 1.7
PDLIM2-210ENST00000429812 QRICH2Q9H0J4 1663 aa25.64■■□□□ 1.69
PDLIM2-210ENST00000429812 SPATA31A1Q5TZJ5 1347 aa25.63■■□□□ 1.69
PDLIM2-210ENST00000429812 NRKQ7Z2Y5 1582 aa25.61■■□□□ 1.69
PDLIM2-210ENST00000429812 ZBTB7CA1YPR0 619 aa25.6■■□□□ 1.69
PDLIM2-210ENST00000429812 EVA1CP58658 441 aa25.6■■□□□ 1.69
PDLIM2-210ENST00000429812 THSD7AQ9UPZ6 1657 aa25.6■■□□□ 1.69
PDLIM2-210ENST00000429812 USP19O94966 1318 aa25.6■■□□□ 1.69
PDLIM2-210ENST00000429812 LARP1Q6PKG0 1096 aaKnown RBP25.59■■□□□ 1.69
PDLIM2-210ENST00000429812 CAMTA1Q9Y6Y1 1673 aa25.58■■□□□ 1.69
PDLIM2-210ENST00000429812 EN1Q05925 392 aaPredicted RBP25.58■■□□□ 1.69
PDLIM2-210ENST00000429812 SSH2Q76I76 1423 aa25.57■■□□□ 1.68
PDLIM2-210ENST00000429812 TRPM1Q7Z4N2 1603 aa25.57■■□□□ 1.68
PDLIM2-210ENST00000429812 GCP02774 474 aa25.57■■□□□ 1.68
PDLIM2-210ENST00000429812 BAG6P46379 1132 aa25.57■■□□□ 1.68
PDLIM2-210ENST00000429812 NLRP13Q86W25 1043 aa25.57■■□□□ 1.68
PDLIM2-210ENST00000429812 ROCK2O75116 1388 aaKnown RBP25.56■■□□□ 1.68
PDLIM2-210ENST00000429812 PSDA5PKW4 1024 aaPredicted RBP25.56■■□□□ 1.68
PDLIM2-210ENST00000429812 USP6P35125 1406 aa25.54■■□□□ 1.68
PDLIM2-210ENST00000429812 NLRP6P59044 892 aa25.54■■□□□ 1.68
PDLIM2-210ENST00000429812 EVC2Q86UK5 1308 aa25.54■■□□□ 1.68
PDLIM2-210ENST00000429812 CPDO75976 1380 aa25.54■■□□□ 1.68
PDLIM2-210ENST00000429812 TRIM37O94972 964 aa25.52■■□□□ 1.68
PDLIM2-210ENST00000429812 LMO7Q8WWI1 1683 aa25.52■■□□□ 1.68
PDLIM2-210ENST00000429812 EZH2Q15910 746 aaKnown RBP25.48■■□□□ 1.67
PDLIM2-210ENST00000429812 BARGINQ6ZT62 677 aa25.48■■□□□ 1.67
PDLIM2-210ENST00000429812 TCP11L2Q8N4U5 519 aa25.48■■□□□ 1.67
PDLIM2-210ENST00000429812 RGPD1P0DJD0 1748 aa25.47■■□□□ 1.67
PDLIM2-210ENST00000429812 SOX12O15370 315 aa25.47■■□□□ 1.67
PDLIM2-210ENST00000429812 PDE3BQ13370 1112 aa25.46■■□□□ 1.67
PDLIM2-210ENST00000429812 FAM196AQ6ZSG2 479 aa25.46■■□□□ 1.67
PDLIM2-210ENST00000429812 COL5A2P05997 1499 aaPredicted RBP25.46■■□□□ 1.67
PDLIM2-210ENST00000429812 BRD4O60885 1362 aaPredicted RBP25.45■■□□□ 1.67
PDLIM2-210ENST00000429812 TNS1Q9HBL0 1735 aaKnown RBP25.45■■□□□ 1.66
PDLIM2-210ENST00000429812 PIK3C2AO00443 1686 aa25.45■■□□□ 1.66
PDLIM2-210ENST00000429812 TTC21BQ7Z4L5 1316 aa25.44■■□□□ 1.66
PDLIM2-210ENST00000429812 R3HDM1Q15032 1099 aaKnown RBP25.43■■□□□ 1.66
PDLIM2-210ENST00000429812 SLIT3O75094 1523 aa25.42■■□□□ 1.66
PDLIM2-210ENST00000429812 APBA3O96018 575 aa25.42■■□□□ 1.66
PDLIM2-210ENST00000429812 AXIN2Q9Y2T1 843 aa25.42■■□□□ 1.66
PDLIM2-210ENST00000429812 CARD11Q9BXL7 1154 aa25.41■■□□□ 1.66
PDLIM2-210ENST00000429812 AATKQ6ZMQ8 1374 aa25.41■■□□□ 1.66
PDLIM2-210ENST00000429812 CAMKK2Q96RR4 588 aa25.4■■□□□ 1.66
PDLIM2-210ENST00000429812 DISP2A7MBM2 1401 aa25.39■■□□□ 1.66
PDLIM2-210ENST00000429812 CRB1P82279 1406 aa25.38■■□□□ 1.65
PDLIM2-210ENST00000429812 ZNF692Q9BU19 519 aaPredicted RBP25.38■■□□□ 1.65
PDLIM2-210ENST00000429812 THRAP3Q9Y2W1 955 aaKnown RBP25.38■■□□□ 1.65
PDLIM2-210ENST00000429812 KTN1Q86UP2 1357 aaKnown RBP25.37■■□□□ 1.65
PDLIM2-210ENST00000429812 TOM1L2Q6ZVM7 507 aa25.37■■□□□ 1.65
PDLIM2-210ENST00000429812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.37■■□□□ 1.65
PDLIM2-210ENST00000429812 CPSF1Q10570 1443 aaKnown RBP25.36■■□□□ 1.65
PDLIM2-210ENST00000429812 COL18A1P39060 1754 aa25.36■■□□□ 1.65
PDLIM2-210ENST00000429812 AKAP12Q02952 1782 aa25.36■■□□□ 1.65
PDLIM2-210ENST00000429812 ARHGEF25Q86VW2 580 aa25.35■■□□□ 1.65
PDLIM2-210ENST00000429812 TONSLQ96HA7 1378 aa25.34■■□□□ 1.65
PDLIM2-210ENST00000429812 TMC1Q8TDI8 760 aa25.33■■□□□ 1.65
PDLIM2-210ENST00000429812 TTC21AQ8NDW8 1320 aa25.33■■□□□ 1.64
PDLIM2-210ENST00000429812 WDR17Q8IZU2 1322 aa25.32■■□□□ 1.64
PDLIM2-210ENST00000429812 PARP4Q9UKK3 1724 aaKnown RBP25.32■■□□□ 1.64
PDLIM2-210ENST00000429812 CSB-PGBD3P0DP91 1061 aa25.31■■□□□ 1.64
PDLIM2-210ENST00000429812 NME9Q86XW9 330 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms