RNA–Protein interactions for RNA: ENST00000428575.6

XRCC6-206, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2 BASIC

Gene XRCC6, Length 2,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-206ENST00000428575 GOLGA2Q08379 1002 aa14.33□□□□□ -0.11
XRCC6-206ENST00000428575 PLEKHG1Q9ULL1 1385 aa14.33□□□□□ -0.12
XRCC6-206ENST00000428575 FRAT2O75474 233 aaPredicted RBP14.33□□□□□ -0.12
XRCC6-206ENST00000428575 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
XRCC6-206ENST00000428575 GGNBP2Q9H3C7 697 aa14.33□□□□□ -0.12
XRCC6-206ENST00000428575 CPS1P31327 1500 aa14.33□□□□□ -0.12
XRCC6-206ENST00000428575 ADAMTS13Q76LX8 1427 aa14.32□□□□□ -0.12
XRCC6-206ENST00000428575 WASLO00401 505 aaPredicted RBP14.32□□□□□ -0.12
XRCC6-206ENST00000428575 LTKP29376 864 aa14.32□□□□□ -0.12
XRCC6-206ENST00000428575 NGEFQ8N5V2 710 aa14.32□□□□□ -0.12
XRCC6-206ENST00000428575 ANKRD26Q9UPS8 1709 aa14.32□□□□□ -0.12
XRCC6-206ENST00000428575 MED14O60244 1454 aa14.32□□□□□ -0.12
XRCC6-206ENST00000428575 ATP7BP35670 1465 aa14.32□□□□□ -0.12
XRCC6-206ENST00000428575 FYB1O15117 783 aa14.32□□□□□ -0.12
XRCC6-206ENST00000428575 EID1Q9Y6B2 187 aa14.32□□□□□ -0.12
XRCC6-206ENST00000428575 DUSP27Q5VZP5 1158 aa14.3□□□□□ -0.12
XRCC6-206ENST00000428575 CRBNQ96SW2 442 aa14.3□□□□□ -0.12
XRCC6-206ENST00000428575 KIF20BQ96Q89 1820 aa14.29□□□□□ -0.12
XRCC6-206ENST00000428575 C8orf34Q49A92 452 aa14.29□□□□□ -0.12
XRCC6-206ENST00000428575 SLIT1O75093 1534 aa14.29□□□□□ -0.12
XRCC6-206ENST00000428575 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
XRCC6-206ENST00000428575 BECN1Q14457 450 aa14.29□□□□□ -0.12
XRCC6-206ENST00000428575 RUNDC1Q96C34 613 aa14.29□□□□□ -0.12
XRCC6-206ENST00000428575 PPIP5K1Q6PFW1 1433 aa14.29□□□□□ -0.12
XRCC6-206ENST00000428575 ARHGAP23Q9P227 1491 aa14.28□□□□□ -0.12
XRCC6-206ENST00000428575 ROBO2Q9HCK4 1378 aa14.28□□□□□ -0.12
XRCC6-206ENST00000428575 HSP90AA1P07900 732 aaKnown RBP14.27□□□□□ -0.12
XRCC6-206ENST00000428575 CLCN1P35523 988 aa14.27□□□□□ -0.12
XRCC6-206ENST00000428575 HSP90AA2PQ14568 343 aaPredicted RBP14.27□□□□□ -0.13
XRCC6-206ENST00000428575 THEMISQ8N1K5 641 aaPredicted RBP14.27□□□□□ -0.13
XRCC6-206ENST00000428575 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.27□□□□□ -0.13
XRCC6-206ENST00000428575 NUDT16Q96DE0 195 aaKnown RBP14.27□□□□□ -0.13
XRCC6-206ENST00000428575 PNNQ9H307 717 aaKnown RBP14.27□□□□□ -0.13
XRCC6-206ENST00000428575 SLC4A3P48751 1232 aa14.26□□□□□ -0.13
XRCC6-206ENST00000428575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.26□□□□□ -0.13
XRCC6-206ENST00000428575 RRAGDQ9NQL2 400 aaPredicted RBP14.26□□□□□ -0.13
XRCC6-206ENST00000428575 E9PSI1 815 aa14.26□□□□□ -0.13
XRCC6-206ENST00000428575 U2AF1L5P0DN76 240 aaPredicted RBP14.26□□□□□ -0.13
XRCC6-206ENST00000428575 U2AF1Q01081 240 aaKnown RBP eCLIP14.26□□□□□ -0.13
XRCC6-206ENST00000428575 TRMT2AQ8IZ69 625 aaKnown RBP14.26□□□□□ -0.13
XRCC6-206ENST00000428575 SLC26A8Q96RN1 970 aa14.26□□□□□ -0.13
XRCC6-206ENST00000428575 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
XRCC6-206ENST00000428575 CPSF1Q10570 1443 aaKnown RBP14.25□□□□□ -0.13
XRCC6-206ENST00000428575 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
XRCC6-206ENST00000428575 TCP11L2Q8N4U5 519 aa14.24□□□□□ -0.13
XRCC6-206ENST00000428575 ZMYND15Q9H091 742 aa14.24□□□□□ -0.13
XRCC6-206ENST00000428575 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
XRCC6-206ENST00000428575 WWC1Q8IX03 1113 aa14.24□□□□□ -0.13
XRCC6-206ENST00000428575 VSIG10Q8N0Z9 540 aa14.24□□□□□ -0.13
XRCC6-206ENST00000428575 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
XRCC6-206ENST00000428575 COL3A1P02461 1466 aaPredicted RBP14.24□□□□□ -0.13
XRCC6-206ENST00000428575 CDC42BPGQ6DT37 1551 aa14.24□□□□□ -0.13
XRCC6-206ENST00000428575 PLIN1O60240 522 aa14.23□□□□□ -0.13
XRCC6-206ENST00000428575 NKTRP30414 1462 aaKnown RBP14.23□□□□□ -0.13
XRCC6-206ENST00000428575 ADGRB2O60241 1585 aa14.23□□□□□ -0.13
XRCC6-206ENST00000428575 PTPRUQ92729 1446 aa14.23□□□□□ -0.13
XRCC6-206ENST00000428575 NEUROD2Q15784 382 aa14.23□□□□□ -0.13
XRCC6-206ENST00000428575 NAP1L5Q96NT1 182 aaPredicted RBP14.23□□□□□ -0.13
XRCC6-206ENST00000428575 RRP7AQ9Y3A4 280 aaKnown RBP14.23□□□□□ -0.13
XRCC6-206ENST00000428575 TBX22Q9Y458 520 aa14.23□□□□□ -0.13
XRCC6-206ENST00000428575 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.22□□□□□ -0.13
XRCC6-206ENST00000428575 NCKAP5LQ9HCH0 1330 aa14.22□□□□□ -0.13
XRCC6-206ENST00000428575 U2SURPO15042 1029 aaKnown RBP14.22□□□□□ -0.13
XRCC6-206ENST00000428575 ISY1Q9ULR0 285 aaKnown RBP14.21□□□□□ -0.13
XRCC6-206ENST00000428575 AMOTL2Q9Y2J4 779 aa14.21□□□□□ -0.13
XRCC6-206ENST00000428575 DMRT2Q9Y5R5 561 aa14.21□□□□□ -0.13
XRCC6-206ENST00000428575 ITSN1Q15811 1721 aa14.21□□□□□ -0.13
XRCC6-206ENST00000428575 MON2Q7Z3U7 1717 aa14.21□□□□□ -0.13
XRCC6-206ENST00000428575 PRR36Q9H6K5 1346 aa14.21□□□□□ -0.13
XRCC6-206ENST00000428575 RIMS1Q86UR5 1692 aaKnown RBP14.21□□□□□ -0.13
XRCC6-206ENST00000428575 DIP2AQ14689 1571 aa14.21□□□□□ -0.14
XRCC6-206ENST00000428575 CEP170BQ9Y4F5 1589 aaPredicted RBP14.2□□□□□ -0.14
XRCC6-206ENST00000428575 DIAPH1O60610 1272 aaKnown RBP14.2□□□□□ -0.14
XRCC6-206ENST00000428575 PHF23Q9BUL5 403 aaPredicted RBP14.2□□□□□ -0.14
XRCC6-206ENST00000428575 AKAP12Q02952 1782 aa14.2□□□□□ -0.14
XRCC6-206ENST00000428575 PNPLA6Q8IY17 1366 aa14.2□□□□□ -0.14
XRCC6-206ENST00000428575 GOLGA6L3A6NEY3 463 aa14.2□□□□□ -0.14
XRCC6-206ENST00000428575 CCDC27Q2M243 656 aa14.2□□□□□ -0.14
XRCC6-206ENST00000428575 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
XRCC6-206ENST00000428575 NME9Q86XW9 330 aa14.2□□□□□ -0.14
XRCC6-206ENST00000428575 ZNF692Q9BU19 519 aaPredicted RBP14.2□□□□□ -0.14
XRCC6-206ENST00000428575 WDR63Q8IWG1 891 aa14.19□□□□□ -0.14
XRCC6-206ENST00000428575 PTCH1Q13635 1447 aa14.19□□□□□ -0.14
XRCC6-206ENST00000428575 FSD2A1L4K1 749 aa14.18□□□□□ -0.14
XRCC6-206ENST00000428575 POLKQ9UBT6 870 aa14.18□□□□□ -0.14
XRCC6-206ENST00000428575 MAPK8IP3Q9UPT6 1336 aa14.17□□□□□ -0.14
XRCC6-206ENST00000428575 COG3Q96JB2 828 aa14.17□□□□□ -0.14
XRCC6-206ENST00000428575 MAP2P11137 1827 aaKnown RBP14.17□□□□□ -0.14
XRCC6-206ENST00000428575 TOPAZ1Q8N9V7 1692 aa14.17□□□□□ -0.14
XRCC6-206ENST00000428575 TPM2P07951 284 aa14.16□□□□□ -0.14
XRCC6-206ENST00000428575 PLEKHF1Q96S99 279 aa14.16□□□□□ -0.14
XRCC6-206ENST00000428575 ZRANB1Q9UGI0 708 aa14.16□□□□□ -0.14
XRCC6-206ENST00000428575 PLEKHG3A1L390 1219 aa14.15□□□□□ -0.14
XRCC6-206ENST00000428575 NUTM2FA1L443 756 aa14.15□□□□□ -0.14
XRCC6-206ENST00000428575 FBLN1P23142 703 aa14.15□□□□□ -0.14
XRCC6-206ENST00000428575 C20orf194Q5TEA3 1177 aa14.15□□□□□ -0.14
XRCC6-206ENST00000428575 AATKQ6ZMQ8 1374 aa14.15□□□□□ -0.14
XRCC6-206ENST00000428575 ACEP12821 1306 aa14.15□□□□□ -0.15
XRCC6-206ENST00000428575 XRN1Q8IZH2 1706 aaKnown RBP14.14□□□□□ -0.15
XRCC6-206ENST00000428575 MRE11P49959 708 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms