RNA–Protein interactions for RNA: ENST00000427688.5

CHL1-204, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-204ENST00000427688 ALS2Q96Q42 1657 aa29.78■■■□□ 2.36
CHL1-204ENST00000427688 RBM6P78332 1123 aaKnown RBP29.77■■■□□ 2.36
CHL1-204ENST00000427688 CABP1Q9NZU7 370 aa29.76■■■□□ 2.35
CHL1-204ENST00000427688 ABCA3Q99758 1704 aa29.75■■■□□ 2.35
CHL1-204ENST00000427688 TIMELESSQ9UNS1 1208 aa29.72■■■□□ 2.35
CHL1-204ENST00000427688 NUTM2GQ5VZR2 741 aa29.71■■■□□ 2.35
CHL1-204ENST00000427688 ABTB2Q8N961 1025 aa29.71■■■□□ 2.35
CHL1-204ENST00000427688 ATAD2Q6PL18 1390 aa29.71■■■□□ 2.35
CHL1-204ENST00000427688 SBNO2Q9Y2G9 1366 aa29.71■■■□□ 2.35
CHL1-204ENST00000427688 UNC5CLQ8IV45 518 aa29.69■■■□□ 2.34
CHL1-204ENST00000427688 BCL9LQ86UU0 1499 aa29.68■■■□□ 2.34
CHL1-204ENST00000427688 CDK12Q9NYV4 1490 aaPredicted RBP29.68■■■□□ 2.34
CHL1-204ENST00000427688 ATRNO75882 1429 aa29.68■■■□□ 2.34
CHL1-204ENST00000427688 SLIT2O94813 1529 aa29.66■■■□□ 2.34
CHL1-204ENST00000427688 BRD4O60885 1362 aaPredicted RBP29.64■■■□□ 2.34
CHL1-204ENST00000427688 PLCH1Q4KWH8 1693 aa29.64■■■□□ 2.34
CHL1-204ENST00000427688 ST20-MTHFSA0A0A6YYL1 179 aa29.64■■■□□ 2.34
CHL1-204ENST00000427688 CCDC9Q9Y3X0 531 aaKnown RBP29.64■■■□□ 2.34
CHL1-204ENST00000427688 USP6P35125 1406 aa29.63■■■□□ 2.33
CHL1-204ENST00000427688 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.63■■■□□ 2.33
CHL1-204ENST00000427688 FAM83GA6ND36 823 aa29.63■■■□□ 2.33
CHL1-204ENST00000427688 TMC1Q8TDI8 760 aa29.63■■■□□ 2.33
CHL1-204ENST00000427688 PRDM11Q9NQV5 511 aa29.63■■■□□ 2.33
CHL1-204ENST00000427688 RGS12O14924 1447 aa29.62■■■□□ 2.33
CHL1-204ENST00000427688 SLC24A1O60721 1099 aa29.61■■■□□ 2.33
CHL1-204ENST00000427688 NLRP13Q86W25 1043 aa29.61■■■□□ 2.33
CHL1-204ENST00000427688 GJD4Q96KN9 370 aaPredicted RBP29.61■■■□□ 2.33
CHL1-204ENST00000427688 ZNF692Q9BU19 519 aaPredicted RBP29.61■■■□□ 2.33
CHL1-204ENST00000427688 NWD2Q9ULI1 1742 aa29.61■■■□□ 2.33
CHL1-204ENST00000427688 CRYBG1Q9Y4K1 1723 aa29.6■■■□□ 2.33
CHL1-204ENST00000427688 USP47Q96K76 1375 aa29.6■■■□□ 2.33
CHL1-204ENST00000427688 PHRF1Q9P1Y6 1649 aaKnown RBP29.6■■■□□ 2.33
CHL1-204ENST00000427688 COL14A1Q05707 1796 aaKnown RBP29.59■■■□□ 2.33
CHL1-204ENST00000427688 BTG4Q9NY30 223 aa29.59■■■□□ 2.33
CHL1-204ENST00000427688 ZC3H6P61129 1189 aaKnown RBP29.58■■■□□ 2.33
CHL1-204ENST00000427688 KTN1Q86UP2 1357 aaKnown RBP29.56■■■□□ 2.32
CHL1-204ENST00000427688 KIAA0232Q92628 1395 aa29.56■■■□□ 2.32
CHL1-204ENST00000427688 NLRP6P59044 892 aa29.56■■■□□ 2.32
CHL1-204ENST00000427688 VPS72Q15906 364 aa29.55■■■□□ 2.32
CHL1-204ENST00000427688 AKAP12Q02952 1782 aa29.54■■■□□ 2.32
CHL1-204ENST00000427688 HDGFL2Q7Z4V5 671 aaPredicted RBP29.54■■■□□ 2.32
CHL1-204ENST00000427688 CHRNA2Q15822 529 aa29.53■■■□□ 2.32
CHL1-204ENST00000427688 TESK2Q96S53 571 aa29.53■■■□□ 2.32
CHL1-204ENST00000427688 USP19O94966 1318 aa29.51■■■□□ 2.32
CHL1-204ENST00000427688 TTC21BQ7Z4L5 1316 aa29.51■■■□□ 2.32
CHL1-204ENST00000427688 ZBTB7CA1YPR0 619 aa29.51■■■□□ 2.31
CHL1-204ENST00000427688 TMF1P82094 1093 aa29.51■■■□□ 2.31
CHL1-204ENST00000427688 NRKQ7Z2Y5 1582 aa29.51■■■□□ 2.31
CHL1-204ENST00000427688 TTC21AQ8NDW8 1320 aa29.5■■■□□ 2.31
CHL1-204ENST00000427688 PUS7Q96PZ0 661 aaKnown RBP29.5■■■□□ 2.31
CHL1-204ENST00000427688 TERF2IPQ9NYB0 399 aa29.5■■■□□ 2.31
CHL1-204ENST00000427688 CPSF1Q10570 1443 aaKnown RBP29.5■■■□□ 2.31
CHL1-204ENST00000427688 A0A0G2JS52 829 aa29.49■■■□□ 2.31
CHL1-204ENST00000427688 GCP02774 474 aa29.49■■■□□ 2.31
CHL1-204ENST00000427688 MYT1Q01538 1121 aa29.49■■■□□ 2.31
CHL1-204ENST00000427688 SLC12A5Q9H2X9 1139 aa29.49■■■□□ 2.31
CHL1-204ENST00000427688 NRAPQ86VF7 1730 aa29.48■■■□□ 2.31
CHL1-204ENST00000427688 GLI3P10071 1580 aa29.48■■■□□ 2.31
CHL1-204ENST00000427688 SSH2Q76I76 1423 aa29.48■■■□□ 2.31
CHL1-204ENST00000427688 PIK3C2AO00443 1686 aa29.47■■■□□ 2.31
CHL1-204ENST00000427688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.47■■■□□ 2.31
CHL1-204ENST00000427688 STRN4Q9NRL3 753 aa29.47■■■□□ 2.31
CHL1-204ENST00000427688 EVA1CP58658 441 aa29.46■■■□□ 2.31
CHL1-204ENST00000427688 MON2Q7Z3U7 1717 aa29.45■■■□□ 2.31
CHL1-204ENST00000427688 CPDO75976 1380 aa29.44■■■□□ 2.3
CHL1-204ENST00000427688 NINLQ9Y2I6 1382 aa29.44■■■□□ 2.3
CHL1-204ENST00000427688 UPF1Q92900 1129 aaKnown RBP eCLIP29.44■■■□□ 2.3
CHL1-204ENST00000427688 SOX12O15370 315 aa29.43■■■□□ 2.3
CHL1-204ENST00000427688 CDCA8Q53HL2 280 aa29.43■■■□□ 2.3
CHL1-204ENST00000427688 SEPT12Q8IYM1 358 aa29.41■■■□□ 2.3
CHL1-204ENST00000427688 CD163L1Q9NR16 1453 aa29.41■■■□□ 2.3
CHL1-204ENST00000427688 SLIT3O75094 1523 aa29.4■■■□□ 2.3
CHL1-204ENST00000427688 FAM98CQ17RN3 349 aaKnown RBP29.4■■■□□ 2.3
CHL1-204ENST00000427688 KCNH5Q8NCM2 988 aa29.4■■■□□ 2.3
CHL1-204ENST00000427688 A0A1W2PP64 1363 aa29.39■■■□□ 2.3
CHL1-204ENST00000427688 EDC4Q6P2E9 1401 aaKnown RBP29.38■■■□□ 2.29
CHL1-204ENST00000427688 SPATA31A5Q5VU36 1347 aa29.38■■■□□ 2.29
CHL1-204ENST00000427688 SPATA31A7Q8IWB4 1347 aa29.38■■■□□ 2.29
CHL1-204ENST00000427688 NME9Q86XW9 330 aa29.36■■■□□ 2.29
CHL1-204ENST00000427688 USP35Q9P2H5 1018 aa29.35■■■□□ 2.29
CHL1-204ENST00000427688 CAMTA1Q9Y6Y1 1673 aa29.34■■■□□ 2.29
CHL1-204ENST00000427688 EIF4G2P78344 907 aaKnown RBP eCLIP29.33■■■□□ 2.29
CHL1-204ENST00000427688 ZRANB1Q9UGI0 708 aa29.33■■■□□ 2.29
CHL1-204ENST00000427688 LMO7Q8WWI1 1683 aa29.32■■■□□ 2.28
CHL1-204ENST00000427688 SPATA31A1Q5TZJ5 1347 aa29.32■■■□□ 2.28
CHL1-204ENST00000427688 ONECUT3O60422 494 aaPredicted RBP29.32■■■□□ 2.28
CHL1-204ENST00000427688 AATKQ6ZMQ8 1374 aa29.31■■■□□ 2.28
CHL1-204ENST00000427688 ANKRD36BQ8N2N9 1353 aa29.3■■■□□ 2.28
CHL1-204ENST00000427688 BRWD3Q6RI45 1802 aa29.3■■■□□ 2.28
CHL1-204ENST00000427688 LARP1Q6PKG0 1096 aaKnown RBP29.3■■■□□ 2.28
CHL1-204ENST00000427688 KRT27Q7Z3Y8 459 aa29.3■■■□□ 2.28
CHL1-204ENST00000427688 POLR3GLQ9BT43 218 aa29.3■■■□□ 2.28
CHL1-204ENST00000427688 USP31Q70CQ4 1352 aa29.29■■■□□ 2.28
CHL1-204ENST00000427688 COL5A2P05997 1499 aaPredicted RBP29.28■■■□□ 2.28
CHL1-204ENST00000427688 EP400Q96L91 3159 aa29.27■■■□□ 2.28
CHL1-204ENST00000427688 ARHGEF25Q86VW2 580 aa29.27■■■□□ 2.28
CHL1-204ENST00000427688 HSPA5P11021 654 aaKnown RBP29.25■■■□□ 2.27
CHL1-204ENST00000427688 NFAT5O94916 1531 aa29.25■■■□□ 2.27
CHL1-204ENST00000427688 TCP11L2Q8N4U5 519 aa29.24■■■□□ 2.27
CHL1-204ENST00000427688 COG3Q96JB2 828 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms