RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 ROCK2O75116 1388 aaKnown RBP14.57□□□□□ -0.08
COMMD1-202ENST00000427417 CRYBG1Q9Y4K1 1723 aa14.56□□□□□ -0.08
COMMD1-202ENST00000427417 FAM83GA6ND36 823 aa14.56□□□□□ -0.08
COMMD1-202ENST00000427417 NWD2Q9ULI1 1742 aa14.55□□□□□ -0.08
COMMD1-202ENST00000427417 PLEKHG3A1L390 1219 aa14.55□□□□□ -0.08
COMMD1-202ENST00000427417 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
COMMD1-202ENST00000427417 POLR3AO14802 1390 aaPredicted RBP14.55□□□□□ -0.08
COMMD1-202ENST00000427417 TRPM1Q7Z4N2 1603 aa14.55□□□□□ -0.08
COMMD1-202ENST00000427417 NRAPQ86VF7 1730 aa14.55□□□□□ -0.08
COMMD1-202ENST00000427417 BRWD3Q6RI45 1802 aa14.55□□□□□ -0.08
COMMD1-202ENST00000427417 NUTM2GQ5VZR2 741 aa14.54□□□□□ -0.08
COMMD1-202ENST00000427417 ACEP12821 1306 aa14.54□□□□□ -0.08
COMMD1-202ENST00000427417 QRICH2Q9H0J4 1663 aa14.54□□□□□ -0.08
COMMD1-202ENST00000427417 TONSLQ96HA7 1378 aa14.53□□□□□ -0.08
COMMD1-202ENST00000427417 VPS72Q15906 364 aa14.53□□□□□ -0.08
COMMD1-202ENST00000427417 NBPF8Q3BBV2 869 aa14.53□□□□□ -0.08
COMMD1-202ENST00000427417 PPIP5K1Q6PFW1 1433 aa14.52□□□□□ -0.08
COMMD1-202ENST00000427417 EVC2Q86UK5 1308 aa14.52□□□□□ -0.08
COMMD1-202ENST00000427417 CABP2Q9NPB3 220 aa14.52□□□□□ -0.09
COMMD1-202ENST00000427417 BTG4Q9NY30 223 aa14.52□□□□□ -0.09
COMMD1-202ENST00000427417 PHRF1Q9P1Y6 1649 aaKnown RBP14.52□□□□□ -0.09
COMMD1-202ENST00000427417 SEPT12Q8IYM1 358 aa14.51□□□□□ -0.09
COMMD1-202ENST00000427417 COL14A1Q05707 1796 aaKnown RBP14.51□□□□□ -0.09
COMMD1-202ENST00000427417 EP400Q96L91 3159 aa14.5□□□□□ -0.09
COMMD1-202ENST00000427417 BRD4O60885 1362 aaPredicted RBP14.5□□□□□ -0.09
COMMD1-202ENST00000427417 CHRNA2Q15822 529 aa14.49□□□□□ -0.09
COMMD1-202ENST00000427417 PRDM11Q9NQV5 511 aa14.49□□□□□ -0.09
COMMD1-202ENST00000427417 KIAA0232Q92628 1395 aa14.48□□□□□ -0.09
COMMD1-202ENST00000427417 A0A0G2JS52 829 aa14.48□□□□□ -0.09
COMMD1-202ENST00000427417 MYT1Q01538 1121 aa14.48□□□□□ -0.09
COMMD1-202ENST00000427417 FAM98CQ17RN3 349 aaKnown RBP14.48□□□□□ -0.09
COMMD1-202ENST00000427417 ABTB2Q8N961 1025 aa14.48□□□□□ -0.09
COMMD1-202ENST00000427417 ZC3H6P61129 1189 aaKnown RBP14.47□□□□□ -0.09
COMMD1-202ENST00000427417 CCDC125Q86Z20 511 aa14.47□□□□□ -0.09
COMMD1-202ENST00000427417 CARD11Q9BXL7 1154 aa14.47□□□□□ -0.09
COMMD1-202ENST00000427417 CABP1Q9NZU7 370 aa14.47□□□□□ -0.09
COMMD1-202ENST00000427417 ONECUT3O60422 494 aaPredicted RBP14.46□□□□□ -0.09
COMMD1-202ENST00000427417 NLRP13Q86W25 1043 aa14.46□□□□□ -0.09
COMMD1-202ENST00000427417 NRKQ7Z2Y5 1582 aa14.46□□□□□ -0.09
COMMD1-202ENST00000427417 SBNO2Q9Y2G9 1366 aa14.45□□□□□ -0.1
COMMD1-202ENST00000427417 USP6P35125 1406 aa14.44□□□□□ -0.1
COMMD1-202ENST00000427417 KRT27Q7Z3Y8 459 aa14.44□□□□□ -0.1
COMMD1-202ENST00000427417 DEFB132Q7Z7B7 95 aa14.44□□□□□ -0.1
COMMD1-202ENST00000427417 ZNF692Q9BU19 519 aaPredicted RBP14.44□□□□□ -0.1
COMMD1-202ENST00000427417 STRN4Q9NRL3 753 aa14.44□□□□□ -0.1
COMMD1-202ENST00000427417 SPATA31A5Q5VU36 1347 aa14.43□□□□□ -0.1
COMMD1-202ENST00000427417 SPATA31A7Q8IWB4 1347 aa14.43□□□□□ -0.1
COMMD1-202ENST00000427417 FAM182BQ5T319 152 aa14.43□□□□□ -0.1
COMMD1-202ENST00000427417 USP19O94966 1318 aa14.42□□□□□ -0.1
COMMD1-202ENST00000427417 BLMP54132 1417 aaPredicted RBP14.42□□□□□ -0.1
COMMD1-202ENST00000427417 CPDO75976 1380 aa14.42□□□□□ -0.1
COMMD1-202ENST00000427417 GCP02774 474 aa14.41□□□□□ -0.1
COMMD1-202ENST00000427417 NLRP6P59044 892 aa14.41□□□□□ -0.1
COMMD1-202ENST00000427417 THSD7AQ9UPZ6 1657 aa14.4□□□□□ -0.1
COMMD1-202ENST00000427417 CAMTA1Q9Y6Y1 1673 aa14.4□□□□□ -0.1
COMMD1-202ENST00000427417 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
COMMD1-202ENST00000427417 EVA1CP58658 441 aa14.4□□□□□ -0.1
COMMD1-202ENST00000427417 USP35Q9P2H5 1018 aa14.4□□□□□ -0.1
COMMD1-202ENST00000427417 LMO7Q8WWI1 1683 aa14.39□□□□□ -0.11
COMMD1-202ENST00000427417 ZBTB7CA1YPR0 619 aa14.39□□□□□ -0.11
COMMD1-202ENST00000427417 SF3B2Q13435 895 aaKnown RBP14.39□□□□□ -0.11
COMMD1-202ENST00000427417 SSH2Q76I76 1423 aa14.39□□□□□ -0.11
COMMD1-202ENST00000427417 PIK3C2AO00443 1686 aa14.39□□□□□ -0.11
COMMD1-202ENST00000427417 SPATA31A1Q5TZJ5 1347 aa14.39□□□□□ -0.11
COMMD1-202ENST00000427417 TTC21AQ8NDW8 1320 aa14.39□□□□□ -0.11
COMMD1-202ENST00000427417 KTN1Q86UP2 1357 aaKnown RBP14.37□□□□□ -0.11
COMMD1-202ENST00000427417 LARP1Q6PKG0 1096 aaKnown RBP14.37□□□□□ -0.11
COMMD1-202ENST00000427417 ZRANB1Q9UGI0 708 aa14.37□□□□□ -0.11
COMMD1-202ENST00000427417 TTC21BQ7Z4L5 1316 aa14.37□□□□□ -0.11
COMMD1-202ENST00000427417 AKAP12Q02952 1782 aa14.37□□□□□ -0.11
COMMD1-202ENST00000427417 CPSF1Q10570 1443 aaKnown RBP14.36□□□□□ -0.11
COMMD1-202ENST00000427417 KCNH5Q8NCM2 988 aa14.36□□□□□ -0.11
COMMD1-202ENST00000427417 PUS7Q96PZ0 661 aaKnown RBP14.36□□□□□ -0.11
COMMD1-202ENST00000427417 SLIT3O75094 1523 aa14.36□□□□□ -0.11
COMMD1-202ENST00000427417 TMC1Q8TDI8 760 aa14.35□□□□□ -0.11
COMMD1-202ENST00000427417 CLSPNQ9HAW4 1339 aa14.35□□□□□ -0.11
COMMD1-202ENST00000427417 AATKQ6ZMQ8 1374 aa14.34□□□□□ -0.11
COMMD1-202ENST00000427417 COL5A2P05997 1499 aaPredicted RBP14.34□□□□□ -0.11
COMMD1-202ENST00000427417 SOX12O15370 315 aa14.34□□□□□ -0.11
COMMD1-202ENST00000427417 BARGINQ6ZT62 677 aa14.34□□□□□ -0.11
COMMD1-202ENST00000427417 HDGFL2Q7Z4V5 671 aaPredicted RBP14.34□□□□□ -0.11
COMMD1-202ENST00000427417 TIMELESSQ9UNS1 1208 aa14.34□□□□□ -0.11
COMMD1-202ENST00000427417 THRAP3Q9Y2W1 955 aaKnown RBP14.34□□□□□ -0.11
COMMD1-202ENST00000427417 TERF2IPQ9NYB0 399 aa14.33□□□□□ -0.12
COMMD1-202ENST00000427417 RGPD1P0DJD0 1748 aa14.32□□□□□ -0.12
COMMD1-202ENST00000427417 TNS1Q9HBL0 1735 aaKnown RBP14.32□□□□□ -0.12
COMMD1-202ENST00000427417 ST20-MTHFSA0A0A6YYL1 179 aa14.32□□□□□ -0.12
COMMD1-202ENST00000427417 EN1Q05925 392 aaPredicted RBP14.32□□□□□ -0.12
COMMD1-202ENST00000427417 TCP11L2Q8N4U5 519 aa14.32□□□□□ -0.12
COMMD1-202ENST00000427417 NINLQ9Y2I6 1382 aa14.32□□□□□ -0.12
COMMD1-202ENST00000427417 MON2Q7Z3U7 1717 aa14.32□□□□□ -0.12
COMMD1-202ENST00000427417 COL18A1P39060 1754 aa14.32□□□□□ -0.12
COMMD1-202ENST00000427417 BAG6P46379 1132 aa14.31□□□□□ -0.12
COMMD1-202ENST00000427417 PCGF6Q9BYE7 350 aa14.31□□□□□ -0.12
COMMD1-202ENST00000427417 RGPD5Q99666 1765 aa14.3□□□□□ -0.12
COMMD1-202ENST00000427417 TESK2Q96S53 571 aa14.3□□□□□ -0.12
COMMD1-202ENST00000427417 SLC12A5Q9H2X9 1139 aa14.3□□□□□ -0.12
COMMD1-202ENST00000427417 AXIN2Q9Y2T1 843 aa14.3□□□□□ -0.12
COMMD1-202ENST00000427417 CRB1P82279 1406 aa14.3□□□□□ -0.12
COMMD1-202ENST00000427417 CD163L1Q9NR16 1453 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms