RNA–Protein interactions for RNA: ENST00000427259.1

LINC00476-203, long intergenic non-protein coding RNA 476, humanhuman

TSL 2

Gene LINC00476, Length 893 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-203ENST00000427259 NEUROD1Q13562 356 aa19.06■□□□□ 0.64
LINC00476-203ENST00000427259 EP400Q96L91 3159 aa19.06■□□□□ 0.64
LINC00476-203ENST00000427259 PHRF1Q9P1Y6 1649 aaKnown RBP19.06■□□□□ 0.64
LINC00476-203ENST00000427259 UNC5CLQ8IV45 518 aa19.05■□□□□ 0.64
LINC00476-203ENST00000427259 GJD4Q96KN9 370 aaPredicted RBP19.05■□□□□ 0.64
LINC00476-203ENST00000427259 GPRASP1Q5JY77 1395 aa19.05■□□□□ 0.64
LINC00476-203ENST00000427259 TRIM26Q12899 539 aaPredicted RBP19.04■□□□□ 0.64
LINC00476-203ENST00000427259 NGDNQ8NEJ9 315 aaKnown RBP19.04■□□□□ 0.64
LINC00476-203ENST00000427259 FAM83GA6ND36 823 aa19.03■□□□□ 0.64
LINC00476-203ENST00000427259 HAP1P54257 671 aaPredicted RBP19.03■□□□□ 0.64
LINC00476-203ENST00000427259 COL14A1Q05707 1796 aaKnown RBP19.02■□□□□ 0.64
LINC00476-203ENST00000427259 CENPJQ9HC77 1338 aaPredicted RBP19.01■□□□□ 0.63
LINC00476-203ENST00000427259 POLR3AO14802 1390 aaPredicted RBP19.01■□□□□ 0.63
LINC00476-203ENST00000427259 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
LINC00476-203ENST00000427259 NBPF8Q3BBV2 869 aa19■□□□□ 0.63
LINC00476-203ENST00000427259 CABP2Q9NPB3 220 aa19■□□□□ 0.63
LINC00476-203ENST00000427259 ACEP12821 1306 aa19■□□□□ 0.63
LINC00476-203ENST00000427259 ATAD2Q6PL18 1390 aa18.98■□□□□ 0.63
LINC00476-203ENST00000427259 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
LINC00476-203ENST00000427259 CCDC61Q9Y6R9 512 aa18.98■□□□□ 0.63
LINC00476-203ENST00000427259 PPIP5K1Q6PFW1 1433 aa18.98■□□□□ 0.63
LINC00476-203ENST00000427259 NRKQ7Z2Y5 1582 aa18.98■□□□□ 0.63
LINC00476-203ENST00000427259 HOXD11P31277 338 aaPredicted RBP18.97■□□□□ 0.63
LINC00476-203ENST00000427259 VPS72Q15906 364 aa18.97■□□□□ 0.63
LINC00476-203ENST00000427259 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
LINC00476-203ENST00000427259 ROCK2O75116 1388 aaKnown RBP18.95■□□□□ 0.62
LINC00476-203ENST00000427259 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
LINC00476-203ENST00000427259 BTG4Q9NY30 223 aa18.95■□□□□ 0.62
LINC00476-203ENST00000427259 KIAA0232Q92628 1395 aa18.93■□□□□ 0.62
LINC00476-203ENST00000427259 AKAP12Q02952 1782 aa18.92■□□□□ 0.62
LINC00476-203ENST00000427259 SEPT12Q8IYM1 358 aa18.92■□□□□ 0.62
LINC00476-203ENST00000427259 CCDC9Q9Y3X0 531 aaKnown RBP18.92■□□□□ 0.62
LINC00476-203ENST00000427259 PIK3C2AO00443 1686 aa18.92■□□□□ 0.62
LINC00476-203ENST00000427259 CHRNA2Q15822 529 aa18.91■□□□□ 0.62
LINC00476-203ENST00000427259 LMO7Q8WWI1 1683 aa18.91■□□□□ 0.62
LINC00476-203ENST00000427259 THSD7AQ9UPZ6 1657 aa18.9■□□□□ 0.62
LINC00476-203ENST00000427259 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
LINC00476-203ENST00000427259 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.61
LINC00476-203ENST00000427259 ONECUT3O60422 494 aaPredicted RBP18.89■□□□□ 0.61
LINC00476-203ENST00000427259 ZC3H6P61129 1189 aaKnown RBP18.89■□□□□ 0.61
LINC00476-203ENST00000427259 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
LINC00476-203ENST00000427259 CABP1Q9NZU7 370 aa18.89■□□□□ 0.61
LINC00476-203ENST00000427259 USP6P35125 1406 aa18.89■□□□□ 0.61
LINC00476-203ENST00000427259 USP19O94966 1318 aa18.88■□□□□ 0.61
LINC00476-203ENST00000427259 CAMTA1Q9Y6Y1 1673 aa18.88■□□□□ 0.61
LINC00476-203ENST00000427259 FAM98CQ17RN3 349 aaKnown RBP18.87■□□□□ 0.61
LINC00476-203ENST00000427259 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
LINC00476-203ENST00000427259 ABTB2Q8N961 1025 aa18.87■□□□□ 0.61
LINC00476-203ENST00000427259 SPATA31A5Q5VU36 1347 aa18.86■□□□□ 0.61
LINC00476-203ENST00000427259 SPATA31A7Q8IWB4 1347 aa18.86■□□□□ 0.61
LINC00476-203ENST00000427259 EVC2Q86UK5 1308 aa18.85■□□□□ 0.61
LINC00476-203ENST00000427259 TONSLQ96HA7 1378 aa18.84■□□□□ 0.61
LINC00476-203ENST00000427259 MON2Q7Z3U7 1717 aa18.84■□□□□ 0.61
LINC00476-203ENST00000427259 SLIT3O75094 1523 aa18.84■□□□□ 0.61
LINC00476-203ENST00000427259 FAM182BQ5T319 152 aa18.82■□□□□ 0.6
LINC00476-203ENST00000427259 KRT27Q7Z3Y8 459 aa18.82■□□□□ 0.6
LINC00476-203ENST00000427259 STRN4Q9NRL3 753 aa18.82■□□□□ 0.6
LINC00476-203ENST00000427259 COL18A1P39060 1754 aa18.82■□□□□ 0.6
LINC00476-203ENST00000427259 BLMP54132 1417 aaPredicted RBP18.82■□□□□ 0.6
LINC00476-203ENST00000427259 CPDO75976 1380 aa18.81■□□□□ 0.6
LINC00476-203ENST00000427259 RGPD5Q99666 1765 aa18.81■□□□□ 0.6
LINC00476-203ENST00000427259 SPATA31A1Q5TZJ5 1347 aa18.81■□□□□ 0.6
LINC00476-203ENST00000427259 A0A0G2JS52 829 aa18.81■□□□□ 0.6
LINC00476-203ENST00000427259 MYT1Q01538 1121 aa18.81■□□□□ 0.6
LINC00476-203ENST00000427259 CACNB1Q02641 598 aaPredicted RBP18.81■□□□□ 0.6
LINC00476-203ENST00000427259 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
LINC00476-203ENST00000427259 DEFB132Q7Z7B7 95 aa18.8■□□□□ 0.6
LINC00476-203ENST00000427259 CPSF1Q10570 1443 aaKnown RBP18.8■□□□□ 0.6
LINC00476-203ENST00000427259 TNS1Q9HBL0 1735 aaKnown RBP18.8■□□□□ 0.6
LINC00476-203ENST00000427259 SBNO2Q9Y2G9 1366 aa18.8■□□□□ 0.6
LINC00476-203ENST00000427259 CD163L1Q9NR16 1453 aa18.79■□□□□ 0.6
LINC00476-203ENST00000427259 GCP02774 474 aa18.79■□□□□ 0.6
LINC00476-203ENST00000427259 COL5A2P05997 1499 aaPredicted RBP18.78■□□□□ 0.6
LINC00476-203ENST00000427259 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
LINC00476-203ENST00000427259 NLRP13Q86W25 1043 aa18.78■□□□□ 0.6
LINC00476-203ENST00000427259 BRD4O60885 1362 aaPredicted RBP18.78■□□□□ 0.6
LINC00476-203ENST00000427259 NLRP6P59044 892 aa18.77■□□□□ 0.6
LINC00476-203ENST00000427259 CCDC125Q86Z20 511 aa18.77■□□□□ 0.6
LINC00476-203ENST00000427259 RNF216Q9NWF9 866 aaPredicted RBP18.77■□□□□ 0.6
LINC00476-203ENST00000427259 USP35Q9P2H5 1018 aa18.77■□□□□ 0.6
LINC00476-203ENST00000427259 RGPD1P0DJD0 1748 aa18.77■□□□□ 0.59
LINC00476-203ENST00000427259 TTC21BQ7Z4L5 1316 aa18.76■□□□□ 0.59
LINC00476-203ENST00000427259 WNK3Q9BYP7 1800 aa18.75■□□□□ 0.59
LINC00476-203ENST00000427259 NFAT5O94916 1531 aa18.74■□□□□ 0.59
LINC00476-203ENST00000427259 USP54Q70EL1 1684 aa18.74■□□□□ 0.59
LINC00476-203ENST00000427259 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
LINC00476-203ENST00000427259 ZRANB1Q9UGI0 708 aa18.74■□□□□ 0.59
LINC00476-203ENST00000427259 KTN1Q86UP2 1357 aaKnown RBP18.73■□□□□ 0.59
LINC00476-203ENST00000427259 PARP4Q9UKK3 1724 aaKnown RBP18.73■□□□□ 0.59
LINC00476-203ENST00000427259 PCGF6Q9BYE7 350 aa18.72■□□□□ 0.59
LINC00476-203ENST00000427259 SRCAPQ6ZRS2 3230 aa18.71■□□□□ 0.59
LINC00476-203ENST00000427259 EVA1CP58658 441 aa18.71■□□□□ 0.59
LINC00476-203ENST00000427259 TESK2Q96S53 571 aa18.71■□□□□ 0.59
LINC00476-203ENST00000427259 AXIN2Q9Y2T1 843 aa18.71■□□□□ 0.59
LINC00476-203ENST00000427259 LRRC37A3O60309 1634 aa18.71■□□□□ 0.58
LINC00476-203ENST00000427259 LTN1O94822 1766 aa18.7■□□□□ 0.58
LINC00476-203ENST00000427259 AATKQ6ZMQ8 1374 aa18.7■□□□□ 0.58
LINC00476-203ENST00000427259 SOX12O15370 315 aa18.7■□□□□ 0.58
LINC00476-203ENST00000427259 SLC12A5Q9H2X9 1139 aa18.7■□□□□ 0.58
LINC00476-203ENST00000427259 BARGINQ6ZT62 677 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms