RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 PAK3O75914 559 aaPredicted RBP24.34■■□□□ 1.49
LMCD1-204ENST00000426878 CABLES1Q8TDN4 633 aa24.33■■□□□ 1.49
LMCD1-204ENST00000426878 PUS7Q96PZ0 661 aaKnown RBP24.33■■□□□ 1.49
LMCD1-204ENST00000426878 TESK2Q96S53 571 aa24.33■■□□□ 1.49
LMCD1-204ENST00000426878 ABCA3Q99758 1704 aa24.32■■□□□ 1.48
LMCD1-204ENST00000426878 HAP1P54257 671 aaPredicted RBP24.3■■□□□ 1.48
LMCD1-204ENST00000426878 USP47Q96K76 1375 aa24.3■■□□□ 1.48
LMCD1-204ENST00000426878 ZNF692Q9BU19 519 aaPredicted RBP24.29■■□□□ 1.48
LMCD1-204ENST00000426878 USP21Q9UK80 565 aa24.29■■□□□ 1.48
LMCD1-204ENST00000426878 USP6P35125 1406 aa24.29■■□□□ 1.48
LMCD1-204ENST00000426878 QTRT2Q9H974 415 aaKnown RBP24.28■■□□□ 1.48
LMCD1-204ENST00000426878 RXRBP28702 533 aa24.27■■□□□ 1.48
LMCD1-204ENST00000426878 CRYBG1Q9Y4K1 1723 aa24.27■■□□□ 1.48
LMCD1-204ENST00000426878 BCL9LQ86UU0 1499 aa24.27■■□□□ 1.48
LMCD1-204ENST00000426878 SLIT2O94813 1529 aa24.27■■□□□ 1.48
LMCD1-204ENST00000426878 SSH2Q76I76 1423 aa24.26■■□□□ 1.47
LMCD1-204ENST00000426878 CPSF1Q10570 1443 aaKnown RBP24.26■■□□□ 1.47
LMCD1-204ENST00000426878 TRPC5Q9UL62 973 aaPredicted RBP24.25■■□□□ 1.47
LMCD1-204ENST00000426878 CDK12Q9NYV4 1490 aaPredicted RBP24.24■■□□□ 1.47
LMCD1-204ENST00000426878 RBM6P78332 1123 aaKnown RBP24.24■■□□□ 1.47
LMCD1-204ENST00000426878 ABTB2Q8N961 1025 aa24.24■■□□□ 1.47
LMCD1-204ENST00000426878 ATRNO75882 1429 aa24.23■■□□□ 1.47
LMCD1-204ENST00000426878 AKAP12Q02952 1782 aa24.23■■□□□ 1.47
LMCD1-204ENST00000426878 PLEKHG5O94827 1062 aa24.23■■□□□ 1.47
LMCD1-204ENST00000426878 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.22■■□□□ 1.47
LMCD1-204ENST00000426878 FAM83GA6ND36 823 aa24.21■■□□□ 1.47
LMCD1-204ENST00000426878 UNC5CLQ8IV45 518 aa24.21■■□□□ 1.47
LMCD1-204ENST00000426878 NLRP13Q86W25 1043 aa24.2■■□□□ 1.46
LMCD1-204ENST00000426878 USP19O94966 1318 aa24.2■■□□□ 1.46
LMCD1-204ENST00000426878 NWD2Q9ULI1 1742 aa24.2■■□□□ 1.46
LMCD1-204ENST00000426878 NUTM2GQ5VZR2 741 aa24.19■■□□□ 1.46
LMCD1-204ENST00000426878 NINLQ9Y2I6 1382 aa24.19■■□□□ 1.46
LMCD1-204ENST00000426878 PHRF1Q9P1Y6 1649 aaKnown RBP24.19■■□□□ 1.46
LMCD1-204ENST00000426878 TMF1P82094 1093 aa24.18■■□□□ 1.46
LMCD1-204ENST00000426878 TTC21BQ7Z4L5 1316 aa24.18■■□□□ 1.46
LMCD1-204ENST00000426878 KTN1Q86UP2 1357 aaKnown RBP24.18■■□□□ 1.46
LMCD1-204ENST00000426878 CD163L1Q9NR16 1453 aa24.18■■□□□ 1.46
LMCD1-204ENST00000426878 TTC21AQ8NDW8 1320 aa24.18■■□□□ 1.46
LMCD1-204ENST00000426878 TMC1Q8TDI8 760 aa24.18■■□□□ 1.46
LMCD1-204ENST00000426878 SLC12A5Q9H2X9 1139 aa24.18■■□□□ 1.46
LMCD1-204ENST00000426878 PLCH1Q4KWH8 1693 aa24.17■■□□□ 1.46
LMCD1-204ENST00000426878 COL14A1Q05707 1796 aaKnown RBP24.17■■□□□ 1.46
LMCD1-204ENST00000426878 MON2Q7Z3U7 1717 aa24.16■■□□□ 1.46
LMCD1-204ENST00000426878 NRKQ7Z2Y5 1582 aa24.16■■□□□ 1.46
LMCD1-204ENST00000426878 TERF2IPQ9NYB0 399 aa24.15■■□□□ 1.46
LMCD1-204ENST00000426878 PIK3C2AO00443 1686 aa24.14■■□□□ 1.46
LMCD1-204ENST00000426878 NLRP6P59044 892 aa24.14■■□□□ 1.45
LMCD1-204ENST00000426878 CDCA8Q53HL2 280 aa24.14■■□□□ 1.45
LMCD1-204ENST00000426878 HDGFL2Q7Z4V5 671 aaPredicted RBP24.14■■□□□ 1.45
LMCD1-204ENST00000426878 GJD4Q96KN9 370 aaPredicted RBP24.14■■□□□ 1.45
LMCD1-204ENST00000426878 PRDM11Q9NQV5 511 aa24.14■■□□□ 1.45
LMCD1-204ENST00000426878 CPDO75976 1380 aa24.14■■□□□ 1.45
LMCD1-204ENST00000426878 KIAA0232Q92628 1395 aa24.14■■□□□ 1.45
LMCD1-204ENST00000426878 GCP02774 474 aa24.13■■□□□ 1.45
LMCD1-204ENST00000426878 VPS72Q15906 364 aa24.13■■□□□ 1.45
LMCD1-204ENST00000426878 BTG4Q9NY30 223 aa24.11■■□□□ 1.45
LMCD1-204ENST00000426878 RGS12O14924 1447 aa24.11■■□□□ 1.45
LMCD1-204ENST00000426878 SLIT3O75094 1523 aa24.11■■□□□ 1.45
LMCD1-204ENST00000426878 ZC3H6P61129 1189 aaKnown RBP24.1■■□□□ 1.45
LMCD1-204ENST00000426878 EIF4G2P78344 907 aaKnown RBP eCLIP24.1■■□□□ 1.45
LMCD1-204ENST00000426878 A0A1W2PP64 1363 aa24.1■■□□□ 1.45
LMCD1-204ENST00000426878 NRAPQ86VF7 1730 aa24.1■■□□□ 1.45
LMCD1-204ENST00000426878 EDC4Q6P2E9 1401 aaKnown RBP24.1■■□□□ 1.45
LMCD1-204ENST00000426878 USP31Q70CQ4 1352 aa24.08■■□□□ 1.44
LMCD1-204ENST00000426878 GLI3P10071 1580 aa24.07■■□□□ 1.44
LMCD1-204ENST00000426878 CHRNA2Q15822 529 aa24.06■■□□□ 1.44
LMCD1-204ENST00000426878 ANKRD36BQ8N2N9 1353 aa24.05■■□□□ 1.44
LMCD1-204ENST00000426878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.05■■□□□ 1.44
LMCD1-204ENST00000426878 KCNH5Q8NCM2 988 aa24.05■■□□□ 1.44
LMCD1-204ENST00000426878 USP54Q70EL1 1684 aa24.04■■□□□ 1.44
LMCD1-204ENST00000426878 HSPA5P11021 654 aaKnown RBP24.04■■□□□ 1.44
LMCD1-204ENST00000426878 ONECUT3O60422 494 aaPredicted RBP24.03■■□□□ 1.44
LMCD1-204ENST00000426878 LMO7Q8WWI1 1683 aa24.03■■□□□ 1.44
LMCD1-204ENST00000426878 NME9Q86XW9 330 aa24.01■■□□□ 1.43
LMCD1-204ENST00000426878 AATKQ6ZMQ8 1374 aa24.01■■□□□ 1.43
LMCD1-204ENST00000426878 CAMTA1Q9Y6Y1 1673 aa24.01■■□□□ 1.43
LMCD1-204ENST00000426878 CCDC9Q9Y3X0 531 aaKnown RBP24.01■■□□□ 1.43
LMCD1-204ENST00000426878 SPATA31A5Q5VU36 1347 aa24■■□□□ 1.43
LMCD1-204ENST00000426878 SPATA31A7Q8IWB4 1347 aa24■■□□□ 1.43
LMCD1-204ENST00000426878 ARHGEF25Q86VW2 580 aa24■■□□□ 1.43
LMCD1-204ENST00000426878 ZRANB1Q9UGI0 708 aa23.99■■□□□ 1.43
LMCD1-204ENST00000426878 NFAT5O94916 1531 aa23.98■■□□□ 1.43
LMCD1-204ENST00000426878 OVOS2A0A0J9YW53 1432 aa23.97■■□□□ 1.43
LMCD1-204ENST00000426878 OVOS2Q6IE36 1432 aa23.97■■□□□ 1.43
LMCD1-204ENST00000426878 MYOM1P52179 1685 aa23.97■■□□□ 1.43
LMCD1-204ENST00000426878 EVA1CP58658 441 aa23.96■■□□□ 1.43
LMCD1-204ENST00000426878 COL18A1P39060 1754 aa23.96■■□□□ 1.43
LMCD1-204ENST00000426878 SPATA31A1Q5TZJ5 1347 aa23.95■■□□□ 1.42
LMCD1-204ENST00000426878 SEPT12Q8IYM1 358 aa23.95■■□□□ 1.42
LMCD1-204ENST00000426878 STRN4Q9NRL3 753 aa23.95■■□□□ 1.42
LMCD1-204ENST00000426878 COL5A2P05997 1499 aaPredicted RBP23.94■■□□□ 1.42
LMCD1-204ENST00000426878 UPF1Q92900 1129 aaKnown RBP eCLIP23.93■■□□□ 1.42
LMCD1-204ENST00000426878 ABCC6O95255 1503 aa23.92■■□□□ 1.42
LMCD1-204ENST00000426878 EP400Q96L91 3159 aa23.92■■□□□ 1.42
LMCD1-204ENST00000426878 SOX12O15370 315 aa23.92■■□□□ 1.42
LMCD1-204ENST00000426878 FAM98CQ17RN3 349 aaKnown RBP23.92■■□□□ 1.42
LMCD1-204ENST00000426878 ZBTB7CA1YPR0 619 aa23.91■■□□□ 1.42
LMCD1-204ENST00000426878 LARP1Q6PKG0 1096 aaKnown RBP23.91■■□□□ 1.42
LMCD1-204ENST00000426878 AXIN2Q9Y2T1 843 aa23.91■■□□□ 1.42
LMCD1-204ENST00000426878 FYB1O15117 783 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms