RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 ACEP12821 1306 aa19.13■□□□□ 0.65
CDK3-201ENST00000425876 NWD1Q149M9 1564 aa19.13■□□□□ 0.65
CDK3-201ENST00000425876 SUPT16HQ9Y5B9 1047 aaKnown RBP19.13■□□□□ 0.65
CDK3-201ENST00000425876 PNPLA6Q8IY17 1366 aa19.13■□□□□ 0.65
CDK3-201ENST00000425876 NKTRP30414 1462 aaKnown RBP19.12■□□□□ 0.65
CDK3-201ENST00000425876 FMN2Q9NZ56 1722 aa19.12■□□□□ 0.65
CDK3-201ENST00000425876 NRKQ7Z2Y5 1582 aa19.12■□□□□ 0.65
CDK3-201ENST00000425876 USP6P35125 1406 aa19.11■□□□□ 0.65
CDK3-201ENST00000425876 AATKQ6ZMQ8 1374 aa19.11■□□□□ 0.65
CDK3-201ENST00000425876 SSH2Q76I76 1423 aa19.11■□□□□ 0.65
CDK3-201ENST00000425876 COL3A1P02461 1466 aaPredicted RBP19.1■□□□□ 0.65
CDK3-201ENST00000425876 TTC21BQ7Z4L5 1316 aa19.1■□□□□ 0.65
CDK3-201ENST00000425876 ADGRL3Q9HAR2 1447 aa19.1■□□□□ 0.65
CDK3-201ENST00000425876 NME9Q86XW9 330 aa19.1■□□□□ 0.65
CDK3-201ENST00000425876 COG3Q96JB2 828 aa19.09■□□□□ 0.65
CDK3-201ENST00000425876 ZNF521Q96K83 1311 aa19.08■□□□□ 0.65
CDK3-201ENST00000425876 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.65
CDK3-201ENST00000425876 NUTM2FA1L443 756 aa19.08■□□□□ 0.65
CDK3-201ENST00000425876 TTC21AQ8NDW8 1320 aa19.08■□□□□ 0.64
CDK3-201ENST00000425876 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
CDK3-201ENST00000425876 FKBP8Q14318 412 aa19.07■□□□□ 0.64
CDK3-201ENST00000425876 NCBP3Q53F19 620 aaKnown RBP19.07■□□□□ 0.64
CDK3-201ENST00000425876 SALL2Q9Y467 1007 aaPredicted RBP19.07■□□□□ 0.64
CDK3-201ENST00000425876 RUNDC1Q96C34 613 aa19.06■□□□□ 0.64
CDK3-201ENST00000425876 POLKQ9UBT6 870 aa19.06■□□□□ 0.64
CDK3-201ENST00000425876 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
CDK3-201ENST00000425876 APAF1O14727 1248 aa19.05■□□□□ 0.64
CDK3-201ENST00000425876 ERICH6BQ5W0A0 696 aa19.05■□□□□ 0.64
CDK3-201ENST00000425876 RNF123Q5XPI4 1314 aa19.05■□□□□ 0.64
CDK3-201ENST00000425876 OVOS2A0A0J9YW53 1432 aa19.04■□□□□ 0.64
CDK3-201ENST00000425876 OVOS2Q6IE36 1432 aa19.04■□□□□ 0.64
CDK3-201ENST00000425876 NGDNQ8NEJ9 315 aaKnown RBP19.04■□□□□ 0.64
CDK3-201ENST00000425876 RGPD8O14715 1765 aaPredicted RBP19.04■□□□□ 0.64
CDK3-201ENST00000425876 IQSEC2Q5JU85 1478 aa19.03■□□□□ 0.64
CDK3-201ENST00000425876 DIAPH1O60610 1272 aaKnown RBP19.03■□□□□ 0.64
CDK3-201ENST00000425876 CDK12Q9NYV4 1490 aaPredicted RBP19.03■□□□□ 0.64
CDK3-201ENST00000425876 LRRC7Q96NW7 1537 aa19.03■□□□□ 0.64
CDK3-201ENST00000425876 PMFBP1Q8TBY8 1022 aa19.02■□□□□ 0.64
CDK3-201ENST00000425876 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.64
CDK3-201ENST00000425876 USP31Q70CQ4 1352 aa19.02■□□□□ 0.64
CDK3-201ENST00000425876 U2AF1L5P0DN76 240 aaPredicted RBP19.02■□□□□ 0.63
CDK3-201ENST00000425876 U2AF1Q01081 240 aaKnown RBP eCLIP19.02■□□□□ 0.63
CDK3-201ENST00000425876 XIRP1Q702N8 1843 aaKnown RBP19.01■□□□□ 0.63
CDK3-201ENST00000425876 MAP2P11137 1827 aaKnown RBP19.01■□□□□ 0.63
CDK3-201ENST00000425876 GOLGA2Q08379 1002 aa19.01■□□□□ 0.63
CDK3-201ENST00000425876 CDCA7LQ96GN5 454 aa19.01■□□□□ 0.63
CDK3-201ENST00000425876 NCOA3Q9Y6Q9 1424 aa19■□□□□ 0.63
CDK3-201ENST00000425876 PNNQ9H307 717 aaKnown RBP18.99■□□□□ 0.63
CDK3-201ENST00000425876 CCDC27Q2M243 656 aa18.98■□□□□ 0.63
CDK3-201ENST00000425876 PROSER2Q86WR7 435 aaPredicted RBP18.98■□□□□ 0.63
CDK3-201ENST00000425876 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
CDK3-201ENST00000425876 PHF8Q9UPP1 1060 aa18.98■□□□□ 0.63
CDK3-201ENST00000425876 TRMT2AQ8IZ69 625 aaKnown RBP18.98■□□□□ 0.63
CDK3-201ENST00000425876 TCP11L2Q8N4U5 519 aa18.98■□□□□ 0.63
CDK3-201ENST00000425876 SLFN5Q08AF3 891 aa18.97■□□□□ 0.63
CDK3-201ENST00000425876 EMILIN1Q9Y6C2 1016 aa18.97■□□□□ 0.63
CDK3-201ENST00000425876 U2SURPO15042 1029 aaKnown RBP18.96■□□□□ 0.63
CDK3-201ENST00000425876 FBLN1P23142 703 aa18.96■□□□□ 0.63
CDK3-201ENST00000425876 DUSP27Q5VZP5 1158 aa18.96■□□□□ 0.63
CDK3-201ENST00000425876 C14orf37Q86TY3 774 aa18.96■□□□□ 0.63
CDK3-201ENST00000425876 PLEKHF1Q96S99 279 aa18.96■□□□□ 0.63
CDK3-201ENST00000425876 RCAN3Q9UKA8 241 aa18.96■□□□□ 0.63
CDK3-201ENST00000425876 FCHSD2O94868 740 aa18.95■□□□□ 0.62
CDK3-201ENST00000425876 WWC1Q8IX03 1113 aa18.95■□□□□ 0.62
CDK3-201ENST00000425876 C19orf44Q9H6X5 657 aa18.95■□□□□ 0.62
CDK3-201ENST00000425876 USP54Q70EL1 1684 aa18.95■□□□□ 0.62
CDK3-201ENST00000425876 E9PSI1 815 aa18.94■□□□□ 0.62
CDK3-201ENST00000425876 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
CDK3-201ENST00000425876 IL13P35225 146 aa18.94■□□□□ 0.62
CDK3-201ENST00000425876 RBM33Q96EV2 1170 aaKnown RBP18.94■□□□□ 0.62
CDK3-201ENST00000425876 PIK3C2AO00443 1686 aa18.93■□□□□ 0.62
CDK3-201ENST00000425876 RRS1Q15050 365 aaKnown RBP18.93■□□□□ 0.62
CDK3-201ENST00000425876 WDR63Q8IWG1 891 aa18.93■□□□□ 0.62
CDK3-201ENST00000425876 DCCP43146 1447 aa18.93■□□□□ 0.62
CDK3-201ENST00000425876 TMEM94Q12767 1356 aa18.92■□□□□ 0.62
CDK3-201ENST00000425876 MAPK8IP3Q9UPT6 1336 aa18.91■□□□□ 0.62
CDK3-201ENST00000425876 ESCO1Q5FWF5 840 aa18.9■□□□□ 0.62
CDK3-201ENST00000425876 RSPH6AQ9H0K4 717 aa18.89■□□□□ 0.62
CDK3-201ENST00000425876 KIF24Q5T7B8 1368 aa18.89■□□□□ 0.62
CDK3-201ENST00000425876 TMPOP42166 694 aaKnown RBP18.89■□□□□ 0.61
CDK3-201ENST00000425876 NLRP6P59044 892 aa18.89■□□□□ 0.61
CDK3-201ENST00000425876 C1orf167Q5SNV9 1468 aa18.88■□□□□ 0.61
CDK3-201ENST00000425876 UBAP1LF5GYI3 381 aa18.88■□□□□ 0.61
CDK3-201ENST00000425876 RRP1P56182 461 aaKnown RBP18.88■□□□□ 0.61
CDK3-201ENST00000425876 SBNO1A3KN83 1393 aa18.87■□□□□ 0.61
CDK3-201ENST00000425876 IRX6P78412 446 aaPredicted RBP18.87■□□□□ 0.61
CDK3-201ENST00000425876 ABTB2Q8N961 1025 aa18.87■□□□□ 0.61
CDK3-201ENST00000425876 SPINK5Q9NQ38 1064 aaPredicted RBP18.87■□□□□ 0.61
CDK3-201ENST00000425876 RRP7AQ9Y3A4 280 aaKnown RBP18.87■□□□□ 0.61
CDK3-201ENST00000425876 KIF1AQ12756 1690 aa18.86■□□□□ 0.61
CDK3-201ENST00000425876 NEFMP07197 916 aa18.86■□□□□ 0.61
CDK3-201ENST00000425876 PSME1Q06323 249 aa18.86■□□□□ 0.61
CDK3-201ENST00000425876 NEUROD2Q15784 382 aa18.85■□□□□ 0.61
CDK3-201ENST00000425876 PPP4R2Q9NY27 417 aa18.85■□□□□ 0.61
CDK3-201ENST00000425876 MARF1Q9Y4F3 1742 aaKnown RBP18.85■□□□□ 0.61
CDK3-201ENST00000425876 MAP3K19Q56UN5 1328 aa18.85■□□□□ 0.61
CDK3-201ENST00000425876 FLT4P35916 1363 aa18.85■□□□□ 0.61
CDK3-201ENST00000425876 PEAK1Q9H792 1746 aa18.85■□□□□ 0.61
CDK3-201ENST00000425876 ATF3P18847 181 aa18.85■□□□□ 0.61
CDK3-201ENST00000425876 PAK3O75914 559 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms