RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 RGS12O14924 1447 aa26.14■■□□□ 1.78
SMARCAL1-205ENST00000425815 PPIP5K1Q6PFW1 1433 aa26.14■■□□□ 1.78
SMARCAL1-205ENST00000425815 TOPAZ1Q8N9V7 1692 aa26.14■■□□□ 1.78
SMARCAL1-205ENST00000425815 ALS2Q96Q42 1657 aa26.14■■□□□ 1.78
SMARCAL1-205ENST00000425815 QRICH2Q9H0J4 1663 aa26.13■■□□□ 1.77
SMARCAL1-205ENST00000425815 RALGAPBQ86X10 1494 aa26.12■■□□□ 1.77
SMARCAL1-205ENST00000425815 MARF1Q9Y4F3 1742 aaKnown RBP26.12■■□□□ 1.77
SMARCAL1-205ENST00000425815 GJD4Q96KN9 370 aaPredicted RBP26.12■■□□□ 1.77
SMARCAL1-205ENST00000425815 ITSN1Q15811 1721 aa26.11■■□□□ 1.77
SMARCAL1-205ENST00000425815 NUTM2GQ5VZR2 741 aa26.1■■□□□ 1.77
SMARCAL1-205ENST00000425815 UPF1Q92900 1129 aaKnown RBP eCLIP26.09■■□□□ 1.77
SMARCAL1-205ENST00000425815 ABCA3Q99758 1704 aa26.06■■□□□ 1.76
SMARCAL1-205ENST00000425815 VPS72Q15906 364 aa26.05■■□□□ 1.76
SMARCAL1-205ENST00000425815 ABTB2Q8N961 1025 aa26.05■■□□□ 1.76
SMARCAL1-205ENST00000425815 SBNO2Q9Y2G9 1366 aa26.05■■□□□ 1.76
SMARCAL1-205ENST00000425815 BTG4Q9NY30 223 aa26.03■■□□□ 1.76
SMARCAL1-205ENST00000425815 SSH2Q76I76 1423 aa26.02■■□□□ 1.76
SMARCAL1-205ENST00000425815 USP6P35125 1406 aa26.01■■□□□ 1.75
SMARCAL1-205ENST00000425815 BRD4O60885 1362 aaPredicted RBP26■■□□□ 1.75
SMARCAL1-205ENST00000425815 TNKS1BP1Q9C0C2 1729 aaKnown RBP26■■□□□ 1.75
SMARCAL1-205ENST00000425815 CRYBG1Q9Y4K1 1723 aa26■■□□□ 1.75
SMARCAL1-205ENST00000425815 GLI3P10071 1580 aa25.99■■□□□ 1.75
SMARCAL1-205ENST00000425815 KIAA0232Q92628 1395 aa25.99■■□□□ 1.75
SMARCAL1-205ENST00000425815 USP19O94966 1318 aa25.99■■□□□ 1.75
SMARCAL1-205ENST00000425815 CLSPNQ9HAW4 1339 aa25.99■■□□□ 1.75
SMARCAL1-205ENST00000425815 ZC3H6P61129 1189 aaKnown RBP25.99■■□□□ 1.75
SMARCAL1-205ENST00000425815 TESK2Q96S53 571 aa25.99■■□□□ 1.75
SMARCAL1-205ENST00000425815 ATAD2Q6PL18 1390 aa25.98■■□□□ 1.75
SMARCAL1-205ENST00000425815 ST20-MTHFSA0A0A6YYL1 179 aa25.98■■□□□ 1.75
SMARCAL1-205ENST00000425815 ONECUT3O60422 494 aaPredicted RBP25.98■■□□□ 1.75
SMARCAL1-205ENST00000425815 CHRNA2Q15822 529 aa25.98■■□□□ 1.75
SMARCAL1-205ENST00000425815 ZNF692Q9BU19 519 aaPredicted RBP25.98■■□□□ 1.75
SMARCAL1-205ENST00000425815 PRDM11Q9NQV5 511 aa25.98■■□□□ 1.75
SMARCAL1-205ENST00000425815 NLRP13Q86W25 1043 aa25.97■■□□□ 1.75
SMARCAL1-205ENST00000425815 TIMELESSQ9UNS1 1208 aa25.96■■□□□ 1.75
SMARCAL1-205ENST00000425815 CPSF1Q10570 1443 aaKnown RBP25.96■■□□□ 1.75
SMARCAL1-205ENST00000425815 GCP02774 474 aa25.95■■□□□ 1.74
SMARCAL1-205ENST00000425815 PLCH1Q4KWH8 1693 aa25.95■■□□□ 1.74
SMARCAL1-205ENST00000425815 CCDC9Q9Y3X0 531 aaKnown RBP25.94■■□□□ 1.74
SMARCAL1-205ENST00000425815 NWD2Q9ULI1 1742 aa25.94■■□□□ 1.74
SMARCAL1-205ENST00000425815 TTC21BQ7Z4L5 1316 aa25.93■■□□□ 1.74
SMARCAL1-205ENST00000425815 NLRP6P59044 892 aa25.93■■□□□ 1.74
SMARCAL1-205ENST00000425815 SEPT12Q8IYM1 358 aa25.93■■□□□ 1.74
SMARCAL1-205ENST00000425815 COL14A1Q05707 1796 aaKnown RBP25.92■■□□□ 1.74
SMARCAL1-205ENST00000425815 PUS7Q96PZ0 661 aaKnown RBP25.92■■□□□ 1.74
SMARCAL1-205ENST00000425815 SLC12A5Q9H2X9 1139 aa25.92■■□□□ 1.74
SMARCAL1-205ENST00000425815 PHRF1Q9P1Y6 1649 aaKnown RBP25.91■■□□□ 1.74
SMARCAL1-205ENST00000425815 CPDO75976 1380 aa25.9■■□□□ 1.74
SMARCAL1-205ENST00000425815 SPATA31A5Q5VU36 1347 aa25.89■■□□□ 1.74
SMARCAL1-205ENST00000425815 SPATA31A7Q8IWB4 1347 aa25.89■■□□□ 1.74
SMARCAL1-205ENST00000425815 NRAPQ86VF7 1730 aa25.89■■□□□ 1.74
SMARCAL1-205ENST00000425815 CD163L1Q9NR16 1453 aa25.89■■□□□ 1.73
SMARCAL1-205ENST00000425815 TMC1Q8TDI8 760 aa25.88■■□□□ 1.73
SMARCAL1-205ENST00000425815 NRKQ7Z2Y5 1582 aa25.87■■□□□ 1.73
SMARCAL1-205ENST00000425815 KTN1Q86UP2 1357 aaKnown RBP25.87■■□□□ 1.73
SMARCAL1-205ENST00000425815 FAM98CQ17RN3 349 aaKnown RBP25.87■■□□□ 1.73
SMARCAL1-205ENST00000425815 TTC21AQ8NDW8 1320 aa25.86■■□□□ 1.73
SMARCAL1-205ENST00000425815 STRN4Q9NRL3 753 aa25.85■■□□□ 1.73
SMARCAL1-205ENST00000425815 USP47Q96K76 1375 aa25.84■■□□□ 1.73
SMARCAL1-205ENST00000425815 CCER1Q8TC90 406 aaPredicted RBP25.84■■□□□ 1.73
SMARCAL1-205ENST00000425815 ZRANB1Q9UGI0 708 aa25.84■■□□□ 1.73
SMARCAL1-205ENST00000425815 CAMTA1Q9Y6Y1 1673 aa25.83■■□□□ 1.73
SMARCAL1-205ENST00000425815 SPATA31A1Q5TZJ5 1347 aa25.83■■□□□ 1.73
SMARCAL1-205ENST00000425815 SLIT3O75094 1523 aa25.83■■□□□ 1.72
SMARCAL1-205ENST00000425815 PIK3C2AO00443 1686 aa25.82■■□□□ 1.72
SMARCAL1-205ENST00000425815 SLC24A1O60721 1099 aa25.81■■□□□ 1.72
SMARCAL1-205ENST00000425815 EVA1CP58658 441 aa25.81■■□□□ 1.72
SMARCAL1-205ENST00000425815 LARP1Q6PKG0 1096 aaKnown RBP25.81■■□□□ 1.72
SMARCAL1-205ENST00000425815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.81■■□□□ 1.72
SMARCAL1-205ENST00000425815 AKAP12Q02952 1782 aa25.8■■□□□ 1.72
SMARCAL1-205ENST00000425815 KRT27Q7Z3Y8 459 aa25.8■■□□□ 1.72
SMARCAL1-205ENST00000425815 HDGFL2Q7Z4V5 671 aaPredicted RBP25.79■■□□□ 1.72
SMARCAL1-205ENST00000425815 NME9Q86XW9 330 aa25.79■■□□□ 1.72
SMARCAL1-205ENST00000425815 EP400Q96L91 3159 aa25.79■■□□□ 1.72
SMARCAL1-205ENST00000425815 LMO7Q8WWI1 1683 aa25.78■■□□□ 1.72
SMARCAL1-205ENST00000425815 ARHGEF25Q86VW2 580 aa25.78■■□□□ 1.72
SMARCAL1-205ENST00000425815 AXIN2Q9Y2T1 843 aa25.78■■□□□ 1.72
SMARCAL1-205ENST00000425815 A0A1W2PP64 1363 aa25.78■■□□□ 1.72
SMARCAL1-205ENST00000425815 AATKQ6ZMQ8 1374 aa25.78■■□□□ 1.72
SMARCAL1-205ENST00000425815 TERF2IPQ9NYB0 399 aa25.77■■□□□ 1.72
SMARCAL1-205ENST00000425815 USP31Q70CQ4 1352 aa25.77■■□□□ 1.72
SMARCAL1-205ENST00000425815 ZBTB7CA1YPR0 619 aa25.76■■□□□ 1.71
SMARCAL1-205ENST00000425815 TMF1P82094 1093 aa25.76■■□□□ 1.71
SMARCAL1-205ENST00000425815 KCNH5Q8NCM2 988 aa25.76■■□□□ 1.71
SMARCAL1-205ENST00000425815 A0A0G2JS52 829 aa25.75■■□□□ 1.71
SMARCAL1-205ENST00000425815 SOX12O15370 315 aa25.75■■□□□ 1.71
SMARCAL1-205ENST00000425815 MYT1Q01538 1121 aa25.75■■□□□ 1.71
SMARCAL1-205ENST00000425815 CCDC125Q86Z20 511 aa25.75■■□□□ 1.71
SMARCAL1-205ENST00000425815 USP35Q9P2H5 1018 aa25.75■■□□□ 1.71
SMARCAL1-205ENST00000425815 COL5A2P05997 1499 aaPredicted RBP25.73■■□□□ 1.71
SMARCAL1-205ENST00000425815 EDC4Q6P2E9 1401 aaKnown RBP25.73■■□□□ 1.71
SMARCAL1-205ENST00000425815 BRWD3Q6RI45 1802 aa25.73■■□□□ 1.71
SMARCAL1-205ENST00000425815 BARGINQ6ZT62 677 aa25.73■■□□□ 1.71
SMARCAL1-205ENST00000425815 MON2Q7Z3U7 1717 aa25.73■■□□□ 1.71
SMARCAL1-205ENST00000425815 NINLQ9Y2I6 1382 aa25.72■■□□□ 1.71
SMARCAL1-205ENST00000425815 FAM182BQ5T319 152 aa25.71■■□□□ 1.71
SMARCAL1-205ENST00000425815 TCP11L2Q8N4U5 519 aa25.71■■□□□ 1.71
SMARCAL1-205ENST00000425815 NFAT5O94916 1531 aa25.69■■□□□ 1.7
SMARCAL1-205ENST00000425815 THSD7AQ9UPZ6 1657 aa25.68■■□□□ 1.7
SMARCAL1-205ENST00000425815 COL18A1P39060 1754 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms