RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 TRPC5Q9UL62 973 aaPredicted RBP26.22■■□□□ 1.79
MSH5-207ENST00000425703 PAK3O75914 559 aaPredicted RBP26.21■■□□□ 1.79
MSH5-207ENST00000425703 MARF1Q9Y4F3 1742 aaKnown RBP26.21■■□□□ 1.79
MSH5-207ENST00000425703 BRD4O60885 1362 aaPredicted RBP26.2■■□□□ 1.79
MSH5-207ENST00000425703 BCL9LQ86UU0 1499 aa26.2■■□□□ 1.78
MSH5-207ENST00000425703 SLIT2O94813 1529 aa26.19■■□□□ 1.78
MSH5-207ENST00000425703 ATRNO75882 1429 aa26.18■■□□□ 1.78
MSH5-207ENST00000425703 CABP1Q9NZU7 370 aa26.17■■□□□ 1.78
MSH5-207ENST00000425703 ATAD2Q6PL18 1390 aa26.16■■□□□ 1.78
MSH5-207ENST00000425703 ABCA3Q99758 1704 aa26.15■■□□□ 1.78
MSH5-207ENST00000425703 UNC5CLQ8IV45 518 aa26.15■■□□□ 1.78
MSH5-207ENST00000425703 SLC24A1O60721 1099 aa26.13■■□□□ 1.77
MSH5-207ENST00000425703 PLEKHG5O94827 1062 aa26.11■■□□□ 1.77
MSH5-207ENST00000425703 PUS7Q96PZ0 661 aaKnown RBP26.11■■□□□ 1.77
MSH5-207ENST00000425703 ZNF692Q9BU19 519 aaPredicted RBP26.11■■□□□ 1.77
MSH5-207ENST00000425703 USP6P35125 1406 aa26.11■■□□□ 1.77
MSH5-207ENST00000425703 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.11■■□□□ 1.77
MSH5-207ENST00000425703 FAM83GA6ND36 823 aa26.1■■□□□ 1.77
MSH5-207ENST00000425703 ABTB2Q8N961 1025 aa26.1■■□□□ 1.77
MSH5-207ENST00000425703 RGS12O14924 1447 aa26.09■■□□□ 1.77
MSH5-207ENST00000425703 GJD4Q96KN9 370 aaPredicted RBP26.09■■□□□ 1.77
MSH5-207ENST00000425703 CRYBG1Q9Y4K1 1723 aa26.08■■□□□ 1.77
MSH5-207ENST00000425703 CCER1Q8TC90 406 aaPredicted RBP26.08■■□□□ 1.77
MSH5-207ENST00000425703 SSH2Q76I76 1423 aa26.07■■□□□ 1.76
MSH5-207ENST00000425703 NWD2Q9ULI1 1742 aa26.06■■□□□ 1.76
MSH5-207ENST00000425703 ST20-MTHFSA0A0A6YYL1 179 aa26.06■■□□□ 1.76
MSH5-207ENST00000425703 VPS72Q15906 364 aa26.06■■□□□ 1.76
MSH5-207ENST00000425703 NLRP13Q86W25 1043 aa26.06■■□□□ 1.76
MSH5-207ENST00000425703 TESK2Q96S53 571 aa26.06■■□□□ 1.76
MSH5-207ENST00000425703 USP19O94966 1318 aa26.06■■□□□ 1.76
MSH5-207ENST00000425703 CPSF1Q10570 1443 aaKnown RBP26.05■■□□□ 1.76
MSH5-207ENST00000425703 NUTM2GQ5VZR2 741 aa26.04■■□□□ 1.76
MSH5-207ENST00000425703 PRDM11Q9NQV5 511 aa26.03■■□□□ 1.76
MSH5-207ENST00000425703 PLCH1Q4KWH8 1693 aa26.03■■□□□ 1.76
MSH5-207ENST00000425703 COL14A1Q05707 1796 aaKnown RBP26.02■■□□□ 1.76
MSH5-207ENST00000425703 USP47Q96K76 1375 aa26.02■■□□□ 1.76
MSH5-207ENST00000425703 KIAA0232Q92628 1395 aa26.01■■□□□ 1.75
MSH5-207ENST00000425703 BTG4Q9NY30 223 aa26.01■■□□□ 1.75
MSH5-207ENST00000425703 PHRF1Q9P1Y6 1649 aaKnown RBP26■■□□□ 1.75
MSH5-207ENST00000425703 CPDO75976 1380 aa25.99■■□□□ 1.75
MSH5-207ENST00000425703 TTC21BQ7Z4L5 1316 aa25.99■■□□□ 1.75
MSH5-207ENST00000425703 TTC21AQ8NDW8 1320 aa25.99■■□□□ 1.75
MSH5-207ENST00000425703 KTN1Q86UP2 1357 aaKnown RBP25.98■■□□□ 1.75
MSH5-207ENST00000425703 NINLQ9Y2I6 1382 aa25.97■■□□□ 1.75
MSH5-207ENST00000425703 GCP02774 474 aa25.97■■□□□ 1.75
MSH5-207ENST00000425703 NLRP6P59044 892 aa25.97■■□□□ 1.75
MSH5-207ENST00000425703 GLI3P10071 1580 aa25.97■■□□□ 1.75
MSH5-207ENST00000425703 NRKQ7Z2Y5 1582 aa25.96■■□□□ 1.75
MSH5-207ENST00000425703 ZC3H6P61129 1189 aaKnown RBP25.96■■□□□ 1.75
MSH5-207ENST00000425703 AKAP12Q02952 1782 aa25.96■■□□□ 1.75
MSH5-207ENST00000425703 ONECUT3O60422 494 aaPredicted RBP25.95■■□□□ 1.74
MSH5-207ENST00000425703 TMC1Q8TDI8 760 aa25.95■■□□□ 1.74
MSH5-207ENST00000425703 UPF1Q92900 1129 aaKnown RBP eCLIP25.95■■□□□ 1.74
MSH5-207ENST00000425703 NRAPQ86VF7 1730 aa25.94■■□□□ 1.74
MSH5-207ENST00000425703 CD163L1Q9NR16 1453 aa25.94■■□□□ 1.74
MSH5-207ENST00000425703 HDGFL2Q7Z4V5 671 aaPredicted RBP25.94■■□□□ 1.74
MSH5-207ENST00000425703 TERF2IPQ9NYB0 399 aa25.94■■□□□ 1.74
MSH5-207ENST00000425703 TMF1P82094 1093 aa25.93■■□□□ 1.74
MSH5-207ENST00000425703 SLC12A5Q9H2X9 1139 aa25.93■■□□□ 1.74
MSH5-207ENST00000425703 CCDC9Q9Y3X0 531 aaKnown RBP25.93■■□□□ 1.74
MSH5-207ENST00000425703 SLIT3O75094 1523 aa25.93■■□□□ 1.74
MSH5-207ENST00000425703 CHRNA2Q15822 529 aa25.92■■□□□ 1.74
MSH5-207ENST00000425703 PIK3C2AO00443 1686 aa25.92■■□□□ 1.74
MSH5-207ENST00000425703 SPATA31A5Q5VU36 1347 aa25.9■■□□□ 1.74
MSH5-207ENST00000425703 SPATA31A7Q8IWB4 1347 aa25.9■■□□□ 1.74
MSH5-207ENST00000425703 MON2Q7Z3U7 1717 aa25.89■■□□□ 1.74
MSH5-207ENST00000425703 CDCA8Q53HL2 280 aa25.89■■□□□ 1.74
MSH5-207ENST00000425703 KCNH5Q8NCM2 988 aa25.89■■□□□ 1.74
MSH5-207ENST00000425703 EDC4Q6P2E9 1401 aaKnown RBP25.88■■□□□ 1.73
MSH5-207ENST00000425703 A0A1W2PP64 1363 aa25.88■■□□□ 1.73
MSH5-207ENST00000425703 USP31Q70CQ4 1352 aa25.87■■□□□ 1.73
MSH5-207ENST00000425703 SEPT12Q8IYM1 358 aa25.87■■□□□ 1.73
MSH5-207ENST00000425703 AATKQ6ZMQ8 1374 aa25.85■■□□□ 1.73
MSH5-207ENST00000425703 LMO7Q8WWI1 1683 aa25.84■■□□□ 1.73
MSH5-207ENST00000425703 CAMTA1Q9Y6Y1 1673 aa25.84■■□□□ 1.73
MSH5-207ENST00000425703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.84■■□□□ 1.73
MSH5-207ENST00000425703 SPATA31A1Q5TZJ5 1347 aa25.84■■□□□ 1.73
MSH5-207ENST00000425703 EVA1CP58658 441 aa25.83■■□□□ 1.73
MSH5-207ENST00000425703 STRN4Q9NRL3 753 aa25.83■■□□□ 1.73
MSH5-207ENST00000425703 FAM98CQ17RN3 349 aaKnown RBP25.82■■□□□ 1.72
MSH5-207ENST00000425703 ARHGEF25Q86VW2 580 aa25.81■■□□□ 1.72
MSH5-207ENST00000425703 ANKRD36BQ8N2N9 1353 aa25.81■■□□□ 1.72
MSH5-207ENST00000425703 NME9Q86XW9 330 aa25.8■■□□□ 1.72
MSH5-207ENST00000425703 USP54Q70EL1 1684 aa25.8■■□□□ 1.72
MSH5-207ENST00000425703 COL5A2P05997 1499 aaPredicted RBP25.79■■□□□ 1.72
MSH5-207ENST00000425703 KRT27Q7Z3Y8 459 aa25.78■■□□□ 1.72
MSH5-207ENST00000425703 CCDC125Q86Z20 511 aa25.78■■□□□ 1.72
MSH5-207ENST00000425703 NFAT5O94916 1531 aa25.78■■□□□ 1.72
MSH5-207ENST00000425703 EIF4G2P78344 907 aaKnown RBP eCLIP25.77■■□□□ 1.72
MSH5-207ENST00000425703 LARP1Q6PKG0 1096 aaKnown RBP25.77■■□□□ 1.72
MSH5-207ENST00000425703 BARGINQ6ZT62 677 aa25.77■■□□□ 1.72
MSH5-207ENST00000425703 A0A0G2JS52 829 aa25.76■■□□□ 1.71
MSH5-207ENST00000425703 MYT1Q01538 1121 aa25.76■■□□□ 1.71
MSH5-207ENST00000425703 THRAP3Q9Y2W1 955 aaKnown RBP25.76■■□□□ 1.71
MSH5-207ENST00000425703 ABCC6O95255 1503 aa25.75■■□□□ 1.71
MSH5-207ENST00000425703 ZBTB7CA1YPR0 619 aa25.75■■□□□ 1.71
MSH5-207ENST00000425703 ZRANB1Q9UGI0 708 aa25.75■■□□□ 1.71
MSH5-207ENST00000425703 THSD7AQ9UPZ6 1657 aa25.74■■□□□ 1.71
MSH5-207ENST00000425703 OVOS2A0A0J9YW53 1432 aa25.74■■□□□ 1.71
MSH5-207ENST00000425703 OVOS2Q6IE36 1432 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 1155.9 ms