RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 PAXIP1Q6ZW49 1069 aaPredicted RBP16.62■□□□□ 0.25
COL12A1-205ENST00000425443 ATAD2Q6PL18 1390 aa16.62■□□□□ 0.25
COL12A1-205ENST00000425443 CDK19Q9BWU1 502 aa16.61■□□□□ 0.25
COL12A1-205ENST00000425443 TSPOAP1O95153 1857 aa16.61■□□□□ 0.25
COL12A1-205ENST00000425443 ZFYVE9O95405 1425 aa16.61■□□□□ 0.25
COL12A1-205ENST00000425443 WDR63Q8IWG1 891 aa16.61■□□□□ 0.25
COL12A1-205ENST00000425443 MYH16Q9H6N6 1097 aa16.61■□□□□ 0.25
COL12A1-205ENST00000425443 IQSEC2Q5JU85 1478 aa16.61■□□□□ 0.25
COL12A1-205ENST00000425443 PDE3AQ14432 1141 aa16.61■□□□□ 0.25
COL12A1-205ENST00000425443 YTHDC2Q9H6S0 1430 aaKnown RBP16.6■□□□□ 0.25
COL12A1-205ENST00000425443 RARSP54136 660 aaKnown RBP16.6■□□□□ 0.25
COL12A1-205ENST00000425443 PCDHB15Q9Y5E8 787 aa16.6■□□□□ 0.25
COL12A1-205ENST00000425443 MYO5BQ9ULV0 1848 aa16.6■□□□□ 0.25
COL12A1-205ENST00000425443 CABP1Q9NZU7 370 aa16.6■□□□□ 0.25
COL12A1-205ENST00000425443 NLRP1Q9C000 1473 aa16.59■□□□□ 0.25
COL12A1-205ENST00000425443 NINLQ9Y2I6 1382 aa16.59■□□□□ 0.25
COL12A1-205ENST00000425443 PREX1Q8TCU6 1659 aa16.59■□□□□ 0.25
COL12A1-205ENST00000425443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL12A1-205ENST00000425443 ARXQ96QS3 562 aa16.59■□□□□ 0.25
COL12A1-205ENST00000425443 FYB1O15117 783 aa16.58■□□□□ 0.24
COL12A1-205ENST00000425443 TSR2Q969E8 191 aaKnown RBP16.58■□□□□ 0.24
COL12A1-205ENST00000425443 WAPLQ7Z5K2 1190 aa16.57■□□□□ 0.24
COL12A1-205ENST00000425443 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
COL12A1-205ENST00000425443 ABCC11Q96J66 1382 aa16.57■□□□□ 0.24
COL12A1-205ENST00000425443 TMEM131LA2VDJ0 1609 aa16.56■□□□□ 0.24
COL12A1-205ENST00000425443 CCDC27Q2M243 656 aa16.55■□□□□ 0.24
COL12A1-205ENST00000425443 USP32Q8NFA0 1604 aa16.55■□□□□ 0.24
COL12A1-205ENST00000425443 DIAPH1O60610 1272 aaKnown RBP16.54■□□□□ 0.24
COL12A1-205ENST00000425443 TAF7LQ5H9L4 462 aa16.54■□□□□ 0.24
COL12A1-205ENST00000425443 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
COL12A1-205ENST00000425443 PPP6R1Q9UPN7 881 aa16.54■□□□□ 0.24
COL12A1-205ENST00000425443 PTPRMP28827 1452 aa16.54■□□□□ 0.24
COL12A1-205ENST00000425443 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
COL12A1-205ENST00000425443 FBLN1P23142 703 aa16.53■□□□□ 0.24
COL12A1-205ENST00000425443 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
COL12A1-205ENST00000425443 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
COL12A1-205ENST00000425443 TMPOP42166 694 aaKnown RBP16.52■□□□□ 0.24
COL12A1-205ENST00000425443 RIPK4P57078 832 aa16.52■□□□□ 0.23
COL12A1-205ENST00000425443 ALKQ9UM73 1620 aa16.51■□□□□ 0.23
COL12A1-205ENST00000425443 SPRYD3Q8NCJ5 442 aa16.51■□□□□ 0.23
COL12A1-205ENST00000425443 PDZRN3Q9UPQ7 1066 aa16.51■□□□□ 0.23
COL12A1-205ENST00000425443 SMC4Q9NTJ3 1288 aa16.51■□□□□ 0.23
COL12A1-205ENST00000425443 RIMS2Q9UQ26 1411 aa16.5■□□□□ 0.23
COL12A1-205ENST00000425443 PMFBP1Q8TBY8 1022 aa16.5■□□□□ 0.23
COL12A1-205ENST00000425443 RIMBP3CA6NJZ7 1639 aa16.5■□□□□ 0.23
COL12A1-205ENST00000425443 RIMBP3BA6NNM3 1639 aa16.5■□□□□ 0.23
COL12A1-205ENST00000425443 RIMBP3Q9UFD9 1639 aa16.5■□□□□ 0.23
COL12A1-205ENST00000425443 EXOSC9Q06265 439 aaKnown RBP16.5■□□□□ 0.23
COL12A1-205ENST00000425443 DIP2BQ9P265 1576 aa16.49■□□□□ 0.23
COL12A1-205ENST00000425443 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
COL12A1-205ENST00000425443 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
COL12A1-205ENST00000425443 RSPH6AQ9H0K4 717 aa16.48■□□□□ 0.23
COL12A1-205ENST00000425443 CLTCQ00610 1675 aaKnown RBP16.48■□□□□ 0.23
COL12A1-205ENST00000425443 HDGFP51858 240 aaKnown RBP16.48■□□□□ 0.23
COL12A1-205ENST00000425443 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.48■□□□□ 0.23
COL12A1-205ENST00000425443 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
COL12A1-205ENST00000425443 DZIP1LQ8IYY4 767 aaKnown RBP16.46■□□□□ 0.23
COL12A1-205ENST00000425443 A2ML1A8K2U0 1454 aa16.46■□□□□ 0.23
COL12A1-205ENST00000425443 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
COL12A1-205ENST00000425443 RWDD1Q9H446 243 aaPredicted RBP16.45■□□□□ 0.22
COL12A1-205ENST00000425443 ANTXR1Q9H6X2 564 aa16.45■□□□□ 0.22
COL12A1-205ENST00000425443 HMOX1P09601 288 aa16.45■□□□□ 0.22
COL12A1-205ENST00000425443 TRIM35Q9UPQ4 493 aa16.45■□□□□ 0.22
COL12A1-205ENST00000425443 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
COL12A1-205ENST00000425443 ADGRB2O60241 1585 aa16.44■□□□□ 0.22
COL12A1-205ENST00000425443 WASLO00401 505 aaPredicted RBP16.44■□□□□ 0.22
COL12A1-205ENST00000425443 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
COL12A1-205ENST00000425443 TBC1D32Q96NH3 1257 aa16.44■□□□□ 0.22
COL12A1-205ENST00000425443 CD163L1Q9NR16 1453 aa16.44■□□□□ 0.22
COL12A1-205ENST00000425443 ARHGEF40Q8TER5 1519 aa16.43■□□□□ 0.22
COL12A1-205ENST00000425443 CT47B1P0C2W7 299 aaPredicted RBP16.43■□□□□ 0.22
COL12A1-205ENST00000425443 MVPQ14764 893 aaKnown RBP16.43■□□□□ 0.22
COL12A1-205ENST00000425443 TBC1D2Q9BYX2 928 aa16.43■□□□□ 0.22
COL12A1-205ENST00000425443 FCHSD2O94868 740 aa16.43■□□□□ 0.22
COL12A1-205ENST00000425443 POLKQ9UBT6 870 aa16.43■□□□□ 0.22
COL12A1-205ENST00000425443 AGLP35573 1532 aa16.42■□□□□ 0.22
COL12A1-205ENST00000425443 ZMYM3Q14202 1370 aa16.42■□□□□ 0.22
COL12A1-205ENST00000425443 SSH1Q8WYL5 1049 aa16.42■□□□□ 0.22
COL12A1-205ENST00000425443 NME9Q86XW9 330 aa16.41■□□□□ 0.22
COL12A1-205ENST00000425443 ELL2O00472 640 aaPredicted RBP16.41■□□□□ 0.22
COL12A1-205ENST00000425443 NUDT16Q96DE0 195 aaKnown RBP16.41■□□□□ 0.22
COL12A1-205ENST00000425443 COG3Q96JB2 828 aa16.41■□□□□ 0.22
COL12A1-205ENST00000425443 UPF2Q9HAU5 1272 aaKnown RBP16.41■□□□□ 0.22
COL12A1-205ENST00000425443 EMILIN1Q9Y6C2 1016 aa16.41■□□□□ 0.22
COL12A1-205ENST00000425443 MED14O60244 1454 aa16.4■□□□□ 0.22
COL12A1-205ENST00000425443 TRIM27P14373 513 aa16.4■□□□□ 0.22
COL12A1-205ENST00000425443 PPIP5K1Q6PFW1 1433 aa16.4■□□□□ 0.22
COL12A1-205ENST00000425443 NCKAP5LQ9HCH0 1330 aa16.4■□□□□ 0.22
COL12A1-205ENST00000425443 NUTM2FA1L443 756 aa16.39■□□□□ 0.21
COL12A1-205ENST00000425443 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
COL12A1-205ENST00000425443 NOB1Q9ULX3 412 aaKnown RBP16.39■□□□□ 0.21
COL12A1-205ENST00000425443 METP08581 1390 aa16.39■□□□□ 0.21
COL12A1-205ENST00000425443 IPO8O15397 1037 aaKnown RBP16.39■□□□□ 0.21
COL12A1-205ENST00000425443 MFAP1P55081 439 aaKnown RBP16.39■□□□□ 0.21
COL12A1-205ENST00000425443 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
COL12A1-205ENST00000425443 IL16Q14005 1332 aa16.39■□□□□ 0.21
COL12A1-205ENST00000425443 COL3A1P02461 1466 aaPredicted RBP16.39■□□□□ 0.21
COL12A1-205ENST00000425443 ATF7IPQ6VMQ6 1270 aa16.39■□□□□ 0.21
COL12A1-205ENST00000425443 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
COL12A1-205ENST00000425443 SPATA31D1Q6ZQQ2 1576 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms