RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 TRAK1Q9UPV9 953 aa19.24■□□□□ 0.67
CCDC12-202ENST00000425441 PMFBP1Q8TBY8 1022 aa19.23■□□□□ 0.67
CCDC12-202ENST00000425441 CABLES1Q8TDN4 633 aa19.23■□□□□ 0.67
CCDC12-202ENST00000425441 TULP4Q9NRJ4 1543 aa19.23■□□□□ 0.67
CCDC12-202ENST00000425441 GPRASP1Q5JY77 1395 aa19.22■□□□□ 0.67
CCDC12-202ENST00000425441 DCAF11Q8TEB1 546 aa19.22■□□□□ 0.67
CCDC12-202ENST00000425441 KDM2AQ9Y2K7 1162 aa19.22■□□□□ 0.67
CCDC12-202ENST00000425441 TRPM3Q9HCF6 1732 aaPredicted RBP19.22■□□□□ 0.67
CCDC12-202ENST00000425441 HRCP23327 699 aa19.21■□□□□ 0.67
CCDC12-202ENST00000425441 BLMP54132 1417 aaPredicted RBP19.21■□□□□ 0.67
CCDC12-202ENST00000425441 CCDC9Q9Y3X0 531 aaKnown RBP19.21■□□□□ 0.67
CCDC12-202ENST00000425441 PLEKHG5O94827 1062 aa19.2■□□□□ 0.66
CCDC12-202ENST00000425441 BRWD3Q6RI45 1802 aa19.2■□□□□ 0.66
CCDC12-202ENST00000425441 MINK1Q8N4C8 1332 aaPredicted RBP19.2■□□□□ 0.66
CCDC12-202ENST00000425441 WASLO00401 505 aaPredicted RBP19.19■□□□□ 0.66
CCDC12-202ENST00000425441 SEPT12Q8IYM1 358 aa19.19■□□□□ 0.66
CCDC12-202ENST00000425441 HIRIP3Q9BW71 556 aaPredicted RBP19.19■□□□□ 0.66
CCDC12-202ENST00000425441 ALS2Q96Q42 1657 aa19.19■□□□□ 0.66
CCDC12-202ENST00000425441 ITSN1Q15811 1721 aa19.18■□□□□ 0.66
CCDC12-202ENST00000425441 SF3B2Q13435 895 aaKnown RBP19.18■□□□□ 0.66
CCDC12-202ENST00000425441 NRAPQ86VF7 1730 aa19.17■□□□□ 0.66
CCDC12-202ENST00000425441 ARHGEF28Q8N1W1 1705 aaKnown RBP19.17■□□□□ 0.66
CCDC12-202ENST00000425441 COL14A1Q05707 1796 aaKnown RBP19.16■□□□□ 0.66
CCDC12-202ENST00000425441 ONECUT3O60422 494 aaPredicted RBP19.16■□□□□ 0.66
CCDC12-202ENST00000425441 PRR36Q9H6K5 1346 aa19.16■□□□□ 0.66
CCDC12-202ENST00000425441 POLA2Q14181 598 aa19.15■□□□□ 0.66
CCDC12-202ENST00000425441 NGDNQ8NEJ9 315 aaKnown RBP19.15■□□□□ 0.66
CCDC12-202ENST00000425441 FAM83GA6ND36 823 aa19.14■□□□□ 0.65
CCDC12-202ENST00000425441 KRT27Q7Z3Y8 459 aa19.14■□□□□ 0.65
CCDC12-202ENST00000425441 CRYBG1Q9Y4K1 1723 aa19.12■□□□□ 0.65
CCDC12-202ENST00000425441 A0A0G2JS52 829 aa19.12■□□□□ 0.65
CCDC12-202ENST00000425441 MYT1Q01538 1121 aa19.12■□□□□ 0.65
CCDC12-202ENST00000425441 BTG4Q9NY30 223 aa19.12■□□□□ 0.65
CCDC12-202ENST00000425441 PAK3O75914 559 aaPredicted RBP19.11■□□□□ 0.65
CCDC12-202ENST00000425441 KIAA1210Q9ULL0 1709 aa19.11■□□□□ 0.65
CCDC12-202ENST00000425441 ATP7BP35670 1465 aa19.1■□□□□ 0.65
CCDC12-202ENST00000425441 NUDT16Q96DE0 195 aaKnown RBP19.09■□□□□ 0.65
CCDC12-202ENST00000425441 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.64
CCDC12-202ENST00000425441 DEFB132Q7Z7B7 95 aa19.08■□□□□ 0.64
CCDC12-202ENST00000425441 BAG6P46379 1132 aa19.07■□□□□ 0.64
CCDC12-202ENST00000425441 PRDM11Q9NQV5 511 aa19.07■□□□□ 0.64
CCDC12-202ENST00000425441 PHRF1Q9P1Y6 1649 aaKnown RBP19.06■□□□□ 0.64
CCDC12-202ENST00000425441 SPATA31A5Q5VU36 1347 aa19.05■□□□□ 0.64
CCDC12-202ENST00000425441 SPATA31A7Q8IWB4 1347 aa19.05■□□□□ 0.64
CCDC12-202ENST00000425441 TOPAZ1Q8N9V7 1692 aa19.05■□□□□ 0.64
CCDC12-202ENST00000425441 RGPD1P0DJD0 1748 aa19.04■□□□□ 0.64
CCDC12-202ENST00000425441 CDK19Q9BWU1 502 aa19.04■□□□□ 0.64
CCDC12-202ENST00000425441 PCGF6Q9BYE7 350 aa19.04■□□□□ 0.64
CCDC12-202ENST00000425441 CCDC61Q9Y6R9 512 aa19.03■□□□□ 0.64
CCDC12-202ENST00000425441 POLR3AO14802 1390 aaPredicted RBP19.03■□□□□ 0.64
CCDC12-202ENST00000425441 THSD7AQ9UPZ6 1657 aa19.02■□□□□ 0.64
CCDC12-202ENST00000425441 KIAA0232Q92628 1395 aa19.01■□□□□ 0.63
CCDC12-202ENST00000425441 ACEP12821 1306 aa19■□□□□ 0.63
CCDC12-202ENST00000425441 PLEKHG3A1L390 1219 aa19■□□□□ 0.63
CCDC12-202ENST00000425441 EP400Q96L91 3159 aa18.99■□□□□ 0.63
CCDC12-202ENST00000425441 NBPF8Q3BBV2 869 aa18.99■□□□□ 0.63
CCDC12-202ENST00000425441 LRP5O75197 1615 aa18.98■□□□□ 0.63
CCDC12-202ENST00000425441 SPATA31A1Q5TZJ5 1347 aa18.98■□□□□ 0.63
CCDC12-202ENST00000425441 STRN4Q9NRL3 753 aa18.97■□□□□ 0.63
CCDC12-202ENST00000425441 ZC3H6P61129 1189 aaKnown RBP18.96■□□□□ 0.63
CCDC12-202ENST00000425441 CHRNA2Q15822 529 aa18.96■□□□□ 0.63
CCDC12-202ENST00000425441 NRKQ7Z2Y5 1582 aa18.96■□□□□ 0.63
CCDC12-202ENST00000425441 CENPJQ9HC77 1338 aaPredicted RBP18.96■□□□□ 0.63
CCDC12-202ENST00000425441 BRD4O60885 1362 aaPredicted RBP18.95■□□□□ 0.62
CCDC12-202ENST00000425441 DISP2A7MBM2 1401 aa18.95■□□□□ 0.62
CCDC12-202ENST00000425441 EVA1CP58658 441 aa18.95■□□□□ 0.62
CCDC12-202ENST00000425441 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
CCDC12-202ENST00000425441 NUTM2GQ5VZR2 741 aa18.95■□□□□ 0.62
CCDC12-202ENST00000425441 ABTB2Q8N961 1025 aa18.95■□□□□ 0.62
CCDC12-202ENST00000425441 TNS1Q9HBL0 1735 aaKnown RBP18.94■□□□□ 0.62
CCDC12-202ENST00000425441 PPIP5K1Q6PFW1 1433 aa18.94■□□□□ 0.62
CCDC12-202ENST00000425441 NBPF1Q3BBV0 1214 aa18.94■□□□□ 0.62
CCDC12-202ENST00000425441 FOXD4L1Q9NU39 408 aa18.94■□□□□ 0.62
CCDC12-202ENST00000425441 SSH2Q76I76 1423 aa18.93■□□□□ 0.62
CCDC12-202ENST00000425441 QRICH2Q9H0J4 1663 aa18.93■□□□□ 0.62
CCDC12-202ENST00000425441 EN1Q05925 392 aaPredicted RBP18.93■□□□□ 0.62
CCDC12-202ENST00000425441 FAM196AQ6ZSG2 479 aa18.93■□□□□ 0.62
CCDC12-202ENST00000425441 NLRP13Q86W25 1043 aa18.93■□□□□ 0.62
CCDC12-202ENST00000425441 CPDO75976 1380 aa18.93■□□□□ 0.62
CCDC12-202ENST00000425441 FAM182BQ5T319 152 aa18.92■□□□□ 0.62
CCDC12-202ENST00000425441 BARGINQ6ZT62 677 aa18.92■□□□□ 0.62
CCDC12-202ENST00000425441 USP19O94966 1318 aa18.92■□□□□ 0.62
CCDC12-202ENST00000425441 LMO7Q8WWI1 1683 aa18.91■□□□□ 0.62
CCDC12-202ENST00000425441 PSDA5PKW4 1024 aaPredicted RBP18.9■□□□□ 0.62
CCDC12-202ENST00000425441 CAMTA1Q9Y6Y1 1673 aa18.89■□□□□ 0.61
CCDC12-202ENST00000425441 PDE3BQ13370 1112 aa18.89■□□□□ 0.61
CCDC12-202ENST00000425441 CHRDL2Q6WN34 429 aa18.89■□□□□ 0.61
CCDC12-202ENST00000425441 CABP2Q9NPB3 220 aa18.89■□□□□ 0.61
CCDC12-202ENST00000425441 USP35Q9P2H5 1018 aa18.89■□□□□ 0.61
CCDC12-202ENST00000425441 THRAP3Q9Y2W1 955 aaKnown RBP18.88■□□□□ 0.61
CCDC12-202ENST00000425441 PARD3Q8TEW0 1356 aa18.88■□□□□ 0.61
CCDC12-202ENST00000425441 GCP02774 474 aa18.87■□□□□ 0.61
CCDC12-202ENST00000425441 TCP11L2Q8N4U5 519 aa18.87■□□□□ 0.61
CCDC12-202ENST00000425441 USP6P35125 1406 aa18.86■□□□□ 0.61
CCDC12-202ENST00000425441 TRIM37O94972 964 aa18.86■□□□□ 0.61
CCDC12-202ENST00000425441 LARP1Q6PKG0 1096 aaKnown RBP18.86■□□□□ 0.61
CCDC12-202ENST00000425441 EZH2Q15910 746 aaKnown RBP18.85■□□□□ 0.61
CCDC12-202ENST00000425441 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
CCDC12-202ENST00000425441 COL5A2P05997 1499 aaPredicted RBP18.84■□□□□ 0.61
CCDC12-202ENST00000425441 EVC2Q86UK5 1308 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms