RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 BAG6P46379 1132 aa22.3■■□□□ 1.16
HDAC11-210ENST00000425430 RGPD1P0DJD0 1748 aa22.29■■□□□ 1.16
HDAC11-210ENST00000425430 PSDA5PKW4 1024 aaPredicted RBP22.29■■□□□ 1.16
HDAC11-210ENST00000425430 PRR36Q9H6K5 1346 aa22.29■■□□□ 1.16
HDAC11-210ENST00000425430 CRYBG1Q9Y4K1 1723 aa22.28■■□□□ 1.16
HDAC11-210ENST00000425430 PAK3O75914 559 aaPredicted RBP22.26■■□□□ 1.15
HDAC11-210ENST00000425430 NGDNQ8NEJ9 315 aaKnown RBP22.25■■□□□ 1.15
HDAC11-210ENST00000425430 KDM2AQ9Y2K7 1162 aa22.25■■□□□ 1.15
HDAC11-210ENST00000425430 ITSN1Q15811 1721 aa22.25■■□□□ 1.15
HDAC11-210ENST00000425430 FAM182BQ5T319 152 aa22.24■■□□□ 1.15
HDAC11-210ENST00000425430 THSD7AQ9UPZ6 1657 aa22.23■■□□□ 1.15
HDAC11-210ENST00000425430 WASLO00401 505 aaPredicted RBP22.23■■□□□ 1.15
HDAC11-210ENST00000425430 PRDM11Q9NQV5 511 aa22.23■■□□□ 1.15
HDAC11-210ENST00000425430 SPATA31A5Q5VU36 1347 aa22.23■■□□□ 1.15
HDAC11-210ENST00000425430 SPATA31A7Q8IWB4 1347 aa22.23■■□□□ 1.15
HDAC11-210ENST00000425430 ARHGEF28Q8N1W1 1705 aaKnown RBP22.23■■□□□ 1.15
HDAC11-210ENST00000425430 TNS1Q9HBL0 1735 aaKnown RBP22.22■■□□□ 1.15
HDAC11-210ENST00000425430 PHRF1Q9P1Y6 1649 aaKnown RBP22.21■■□□□ 1.15
HDAC11-210ENST00000425430 EN1Q05925 392 aaPredicted RBP22.21■■□□□ 1.15
HDAC11-210ENST00000425430 DCAF11Q8TEB1 546 aa22.21■■□□□ 1.15
HDAC11-210ENST00000425430 ATP7BP35670 1465 aa22.19■■□□□ 1.14
HDAC11-210ENST00000425430 KIAA0232Q92628 1395 aa22.18■■□□□ 1.14
HDAC11-210ENST00000425430 CHRNA2Q15822 529 aa22.16■■□□□ 1.14
HDAC11-210ENST00000425430 STRN4Q9NRL3 753 aa22.16■■□□□ 1.14
HDAC11-210ENST00000425430 DISP2A7MBM2 1401 aa22.15■■□□□ 1.14
HDAC11-210ENST00000425430 R3HDM1Q15032 1099 aaKnown RBP22.15■■□□□ 1.14
HDAC11-210ENST00000425430 SPATA31A1Q5TZJ5 1347 aa22.14■■□□□ 1.14
HDAC11-210ENST00000425430 NUDT16Q96DE0 195 aaKnown RBP22.14■■□□□ 1.13
HDAC11-210ENST00000425430 NUTM2GQ5VZR2 741 aa22.13■■□□□ 1.13
HDAC11-210ENST00000425430 TOPAZ1Q8N9V7 1692 aa22.13■■□□□ 1.13
HDAC11-210ENST00000425430 ZC3H6P61129 1189 aaKnown RBP22.12■■□□□ 1.13
HDAC11-210ENST00000425430 TRIM26Q12899 539 aaPredicted RBP22.12■■□□□ 1.13
HDAC11-210ENST00000425430 EZH2Q15910 746 aaKnown RBP22.11■■□□□ 1.13
HDAC11-210ENST00000425430 SIN3AQ96ST3 1273 aa22.11■■□□□ 1.13
HDAC11-210ENST00000425430 TRIM37O94972 964 aa22.1■■□□□ 1.13
HDAC11-210ENST00000425430 NRKQ7Z2Y5 1582 aa22.1■■□□□ 1.13
HDAC11-210ENST00000425430 USP35Q9P2H5 1018 aa22.1■■□□□ 1.13
HDAC11-210ENST00000425430 STAC3Q96MF2 364 aa22.09■■□□□ 1.13
HDAC11-210ENST00000425430 SSH2Q76I76 1423 aa22.08■■□□□ 1.13
HDAC11-210ENST00000425430 FAM196AQ6ZSG2 479 aa22.08■■□□□ 1.13
HDAC11-210ENST00000425430 CDK19Q9BWU1 502 aa22.08■■□□□ 1.13
HDAC11-210ENST00000425430 EVA1CP58658 441 aa22.07■■□□□ 1.12
HDAC11-210ENST00000425430 ACEP12821 1306 aa22.06■■□□□ 1.12
HDAC11-210ENST00000425430 POLR3AO14802 1390 aaPredicted RBP22.06■■□□□ 1.12
HDAC11-210ENST00000425430 APBA3O96018 575 aa22.05■■□□□ 1.12
HDAC11-210ENST00000425430 RREB1Q92766 1687 aa22.04■■□□□ 1.12
HDAC11-210ENST00000425430 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
HDAC11-210ENST00000425430 CAMKK2Q96RR4 588 aa22.04■■□□□ 1.12
HDAC11-210ENST00000425430 NBPF8Q3BBV2 869 aa22.03■■□□□ 1.12
HDAC11-210ENST00000425430 LMO7Q8WWI1 1683 aa22.03■■□□□ 1.12
HDAC11-210ENST00000425430 CAMTA1Q9Y6Y1 1673 aa22.03■■□□□ 1.12
HDAC11-210ENST00000425430 NUP188Q5SRE5 1749 aa22.03■■□□□ 1.12
HDAC11-210ENST00000425430 PARD3Q8TEW0 1356 aa22.02■■□□□ 1.12
HDAC11-210ENST00000425430 ABTB2Q8N961 1025 aa22.02■■□□□ 1.12
HDAC11-210ENST00000425430 CCDC61Q9Y6R9 512 aa22.02■■□□□ 1.12
HDAC11-210ENST00000425430 KIAA1210Q9ULL0 1709 aa22.02■■□□□ 1.12
HDAC11-210ENST00000425430 LARP1Q6PKG0 1096 aaKnown RBP22.01■■□□□ 1.11
HDAC11-210ENST00000425430 BARGINQ6ZT62 677 aa22.01■■□□□ 1.11
HDAC11-210ENST00000425430 NEUROD1Q13562 356 aa22■■□□□ 1.11
HDAC11-210ENST00000425430 L3MBTL2Q969R5 705 aa22■■□□□ 1.11
HDAC11-210ENST00000425430 TCP11L2Q8N4U5 519 aa21.99■■□□□ 1.11
HDAC11-210ENST00000425430 USP19O94966 1318 aa21.99■■□□□ 1.11
HDAC11-210ENST00000425430 CPDO75976 1380 aa21.99■■□□□ 1.11
HDAC11-210ENST00000425430 PLEKHG3A1L390 1219 aa21.98■■□□□ 1.11
HDAC11-210ENST00000425430 NBPF1Q3BBV0 1214 aa21.98■■□□□ 1.11
HDAC11-210ENST00000425430 PPIP5K1Q6PFW1 1433 aa21.97■■□□□ 1.11
HDAC11-210ENST00000425430 PARP4Q9UKK3 1724 aaKnown RBP21.97■■□□□ 1.11
HDAC11-210ENST00000425430 ZBTB7CA1YPR0 619 aa21.96■■□□□ 1.11
HDAC11-210ENST00000425430 SRPK2P78362 688 aaKnown RBP21.96■■□□□ 1.11
HDAC11-210ENST00000425430 COL5A2P05997 1499 aaPredicted RBP21.96■■□□□ 1.11
HDAC11-210ENST00000425430 NBPF14Q5TI25 921 aa21.94■■□□□ 1.1
HDAC11-210ENST00000425430 NLRP13Q86W25 1043 aa21.94■■□□□ 1.1
HDAC11-210ENST00000425430 QRICH2Q9H0J4 1663 aa21.94■■□□□ 1.1
HDAC11-210ENST00000425430 GCP02774 474 aa21.93■■□□□ 1.1
HDAC11-210ENST00000425430 THRAP3Q9Y2W1 955 aaKnown RBP21.93■■□□□ 1.1
HDAC11-210ENST00000425430 TRPM1Q7Z4N2 1603 aa21.91■■□□□ 1.1
HDAC11-210ENST00000425430 CENPJQ9HC77 1338 aaPredicted RBP21.91■■□□□ 1.1
HDAC11-210ENST00000425430 CABP2Q9NPB3 220 aa21.91■■□□□ 1.1
HDAC11-210ENST00000425430 LRRC37A3O60309 1634 aa21.91■■□□□ 1.1
HDAC11-210ENST00000425430 CRB1P82279 1406 aa21.9■■□□□ 1.1
HDAC11-210ENST00000425430 OVOS2A0A0G2JMS6 1433 aa21.89■■□□□ 1.1
HDAC11-210ENST00000425430 OVOS2A0A0J9YW53 1432 aa21.89■■□□□ 1.1
HDAC11-210ENST00000425430 OVOS2Q6IE36 1432 aa21.89■■□□□ 1.1
HDAC11-210ENST00000425430 PPP1R1BQ9UD71 204 aaPredicted RBP21.88■■□□□ 1.09
HDAC11-210ENST00000425430 PEAK1Q9H792 1746 aa21.88■■□□□ 1.09
HDAC11-210ENST00000425430 USP6P35125 1406 aa21.88■■□□□ 1.09
HDAC11-210ENST00000425430 SLIT3O75094 1523 aa21.87■■□□□ 1.09
HDAC11-210ENST00000425430 BRD4O60885 1362 aaPredicted RBP21.87■■□□□ 1.09
HDAC11-210ENST00000425430 PIK3C2AO00443 1686 aa21.86■■□□□ 1.09
HDAC11-210ENST00000425430 WNK3Q9BYP7 1800 aa21.86■■□□□ 1.09
HDAC11-210ENST00000425430 NLRP6P59044 892 aa21.86■■□□□ 1.09
HDAC11-210ENST00000425430 RGPD3A6NKT7 1758 aaPredicted RBP21.86■■□□□ 1.09
HDAC11-210ENST00000425430 RGPD4Q7Z3J3 1758 aa21.86■■□□□ 1.09
HDAC11-210ENST00000425430 SBF2Q86WG5 1849 aa21.85■■□□□ 1.09
HDAC11-210ENST00000425430 C11orf95C9JLR9 678 aaPredicted RBP21.84■■□□□ 1.09
HDAC11-210ENST00000425430 SPON1Q9HCB6 807 aa21.84■■□□□ 1.09
HDAC11-210ENST00000425430 CABP1Q9NZU7 370 aa21.84■■□□□ 1.09
HDAC11-210ENST00000425430 AATKQ6ZMQ8 1374 aa21.84■■□□□ 1.09
HDAC11-210ENST00000425430 YY1P25490 414 aa21.83■■□□□ 1.09
HDAC11-210ENST00000425430 TOM1L2Q6ZVM7 507 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms