RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PSDA5PKW4 1024 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB3-203ENST00000425319 EN1Q05925 392 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB3-203ENST00000425319 CDK19Q9BWU1 502 aa17.79■□□□□ 0.44
HLA-DQB3-203ENST00000425319 CCDC61Q9Y6R9 512 aa17.79■□□□□ 0.44
HLA-DQB3-203ENST00000425319 C11orf95C9JLR9 678 aaPredicted RBP17.78■□□□□ 0.44
HLA-DQB3-203ENST00000425319 NBPF8Q3BBV2 869 aa17.78■□□□□ 0.44
HLA-DQB3-203ENST00000425319 NBPF14Q5TI25 921 aa17.78■□□□□ 0.44
HLA-DQB3-203ENST00000425319 NWD2Q9ULI1 1742 aa17.78■□□□□ 0.44
HLA-DQB3-203ENST00000425319 ZC3H6P61129 1189 aaKnown RBP17.77■□□□□ 0.44
HLA-DQB3-203ENST00000425319 ABTB2Q8N961 1025 aa17.77■□□□□ 0.44
HLA-DQB3-203ENST00000425319 PRR36Q9H6K5 1346 aa17.76■□□□□ 0.43
HLA-DQB3-203ENST00000425319 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
HLA-DQB3-203ENST00000425319 APBA3O96018 575 aa17.76■□□□□ 0.43
HLA-DQB3-203ENST00000425319 NLRP13Q86W25 1043 aa17.76■□□□□ 0.43
HLA-DQB3-203ENST00000425319 USP35Q9P2H5 1018 aa17.76■□□□□ 0.43
HLA-DQB3-203ENST00000425319 FAM182BQ5T319 152 aa17.75■□□□□ 0.43
HLA-DQB3-203ENST00000425319 TULP4Q9NRJ4 1543 aa17.75■□□□□ 0.43
HLA-DQB3-203ENST00000425319 SPATA31A1Q5TZJ5 1347 aa17.74■□□□□ 0.43
HLA-DQB3-203ENST00000425319 TRIM37O94972 964 aa17.74■□□□□ 0.43
HLA-DQB3-203ENST00000425319 R3HDM1Q15032 1099 aaKnown RBP17.74■□□□□ 0.43
HLA-DQB3-203ENST00000425319 CHRNA2Q15822 529 aa17.74■□□□□ 0.43
HLA-DQB3-203ENST00000425319 NUTM2GQ5VZR2 741 aa17.74■□□□□ 0.43
HLA-DQB3-203ENST00000425319 SRPK2P78362 688 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB3-203ENST00000425319 KIAA0232Q92628 1395 aa17.73■□□□□ 0.43
HLA-DQB3-203ENST00000425319 ACEP12821 1306 aa17.72■□□□□ 0.43
HLA-DQB3-203ENST00000425319 ADGRB2O60241 1585 aa17.72■□□□□ 0.43
HLA-DQB3-203ENST00000425319 BARGINQ6ZT62 677 aa17.72■□□□□ 0.43
HLA-DQB3-203ENST00000425319 THRAP3Q9Y2W1 955 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB3-203ENST00000425319 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB3-203ENST00000425319 COL14A1Q05707 1796 aaKnown RBP17.71■□□□□ 0.43
HLA-DQB3-203ENST00000425319 PLEKHG3A1L390 1219 aa17.71■□□□□ 0.43
HLA-DQB3-203ENST00000425319 EZH2Q15910 746 aaKnown RBP17.71■□□□□ 0.43
HLA-DQB3-203ENST00000425319 TCP11L2Q8N4U5 519 aa17.71■□□□□ 0.43
HLA-DQB3-203ENST00000425319 PLCH1Q4KWH8 1693 aa17.71■□□□□ 0.42
HLA-DQB3-203ENST00000425319 ADGRB1O14514 1584 aa17.7■□□□□ 0.42
HLA-DQB3-203ENST00000425319 PARD3Q8TEW0 1356 aa17.69■□□□□ 0.42
HLA-DQB3-203ENST00000425319 ATP7BP35670 1465 aa17.69■□□□□ 0.42
HLA-DQB3-203ENST00000425319 BRWD3Q6RI45 1802 aa17.68■□□□□ 0.42
HLA-DQB3-203ENST00000425319 CAMKK2Q96RR4 588 aa17.67■□□□□ 0.42
HLA-DQB3-203ENST00000425319 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
HLA-DQB3-203ENST00000425319 GCP02774 474 aa17.66■□□□□ 0.42
HLA-DQB3-203ENST00000425319 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
HLA-DQB3-203ENST00000425319 BRD4O60885 1362 aaPredicted RBP17.66■□□□□ 0.42
HLA-DQB3-203ENST00000425319 POLR3AO14802 1390 aaPredicted RBP17.65■□□□□ 0.42
HLA-DQB3-203ENST00000425319 DISP2A7MBM2 1401 aa17.64■□□□□ 0.42
HLA-DQB3-203ENST00000425319 NLRP6P59044 892 aa17.64■□□□□ 0.41
HLA-DQB3-203ENST00000425319 LARP1Q6PKG0 1096 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB3-203ENST00000425319 CENPJQ9HC77 1338 aaPredicted RBP17.64■□□□□ 0.41
HLA-DQB3-203ENST00000425319 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
HLA-DQB3-203ENST00000425319 TRPM3Q9HCF6 1732 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB3-203ENST00000425319 TOM1L2Q6ZVM7 507 aa17.61■□□□□ 0.41
HLA-DQB3-203ENST00000425319 SPON1Q9HCB6 807 aa17.61■□□□□ 0.41
HLA-DQB3-203ENST00000425319 CPDO75976 1380 aa17.61■□□□□ 0.41
HLA-DQB3-203ENST00000425319 SSH2Q76I76 1423 aa17.61■□□□□ 0.41
HLA-DQB3-203ENST00000425319 ALS2Q96Q42 1657 aa17.61■□□□□ 0.41
HLA-DQB3-203ENST00000425319 CDCA7Q9BWT1 371 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB3-203ENST00000425319 CABP2Q9NPB3 220 aa17.6■□□□□ 0.41
HLA-DQB3-203ENST00000425319 RGPD1P0DJD0 1748 aa17.6■□□□□ 0.41
HLA-DQB3-203ENST00000425319 ABCA3Q99758 1704 aa17.6■□□□□ 0.41
HLA-DQB3-203ENST00000425319 LRP5O75197 1615 aa17.59■□□□□ 0.41
HLA-DQB3-203ENST00000425319 EVC2Q86UK5 1308 aa17.59■□□□□ 0.41
HLA-DQB3-203ENST00000425319 DDB1Q16531 1140 aa17.59■□□□□ 0.41
HLA-DQB3-203ENST00000425319 NBPF1Q3BBV0 1214 aa17.59■□□□□ 0.41
HLA-DQB3-203ENST00000425319 KCNH5Q8NCM2 988 aa17.59■□□□□ 0.41
HLA-DQB3-203ENST00000425319 CABP1Q9NZU7 370 aa17.59■□□□□ 0.41
HLA-DQB3-203ENST00000425319 NRAPQ86VF7 1730 aa17.58■□□□□ 0.41
HLA-DQB3-203ENST00000425319 EP400Q96L91 3159 aa17.58■□□□□ 0.4
HLA-DQB3-203ENST00000425319 PPIP5K1Q6PFW1 1433 aa17.57■□□□□ 0.4
HLA-DQB3-203ENST00000425319 USP19O94966 1318 aa17.57■□□□□ 0.4
HLA-DQB3-203ENST00000425319 CSB-PGBD3P0DP91 1061 aa17.57■□□□□ 0.4
HLA-DQB3-203ENST00000425319 ITSN1Q15811 1721 aa17.57■□□□□ 0.4
HLA-DQB3-203ENST00000425319 KCNQ2O43526 872 aa17.56■□□□□ 0.4
HLA-DQB3-203ENST00000425319 PLSCR1O15162 318 aa17.55■□□□□ 0.4
HLA-DQB3-203ENST00000425319 CRB1P82279 1406 aa17.55■□□□□ 0.4
HLA-DQB3-203ENST00000425319 AATKQ6ZMQ8 1374 aa17.53■□□□□ 0.4
HLA-DQB3-203ENST00000425319 THSD7AQ9UPZ6 1657 aa17.53■□□□□ 0.4
HLA-DQB3-203ENST00000425319 EXOC5O00471 708 aa17.53■□□□□ 0.4
HLA-DQB3-203ENST00000425319 YY1P25490 414 aa17.53■□□□□ 0.4
HLA-DQB3-203ENST00000425319 BCL11BQ9C0K0 894 aaPredicted RBP17.53■□□□□ 0.4
HLA-DQB3-203ENST00000425319 OVOS2A0A0G2JMS6 1433 aa17.51■□□□□ 0.39
HLA-DQB3-203ENST00000425319 OVOS2A0A0J9YW53 1432 aa17.51■□□□□ 0.39
HLA-DQB3-203ENST00000425319 OVOS2Q6IE36 1432 aa17.51■□□□□ 0.39
HLA-DQB3-203ENST00000425319 CAMTA1Q9Y6Y1 1673 aa17.51■□□□□ 0.39
HLA-DQB3-203ENST00000425319 SRCAPQ6ZRS2 3230 aa17.49■□□□□ 0.39
HLA-DQB3-203ENST00000425319 WDR17Q8IZU2 1322 aa17.48■□□□□ 0.39
HLA-DQB3-203ENST00000425319 TTC21AQ8NDW8 1320 aa17.48■□□□□ 0.39
HLA-DQB3-203ENST00000425319 ARHGEF28Q8N1W1 1705 aaKnown RBP17.48■□□□□ 0.39
HLA-DQB3-203ENST00000425319 USP6P35125 1406 aa17.47■□□□□ 0.39
HLA-DQB3-203ENST00000425319 SOX12O15370 315 aa17.47■□□□□ 0.39
HLA-DQB3-203ENST00000425319 L3MBTL2Q969R5 705 aa17.47■□□□□ 0.39
HLA-DQB3-203ENST00000425319 CARD10Q9BWT7 1032 aa17.47■□□□□ 0.39
HLA-DQB3-203ENST00000425319 STK32BQ9NY57 414 aa17.47■□□□□ 0.39
HLA-DQB3-203ENST00000425319 COL5A2P05997 1499 aaPredicted RBP17.46■□□□□ 0.39
HLA-DQB3-203ENST00000425319 ARHGEF25Q86VW2 580 aa17.46■□□□□ 0.39
HLA-DQB3-203ENST00000425319 KIAA1210Q9ULL0 1709 aa17.46■□□□□ 0.39
HLA-DQB3-203ENST00000425319 PHRF1Q9P1Y6 1649 aaKnown RBP17.46■□□□□ 0.39
HLA-DQB3-203ENST00000425319 TTC21BQ7Z4L5 1316 aa17.46■□□□□ 0.38
HLA-DQB3-203ENST00000425319 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
HLA-DQB3-203ENST00000425319 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB3-203ENST00000425319 CRYBG1Q9Y4K1 1723 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms