RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 COL14A1Q05707 1796 aaKnown RBP21.99■■□□□ 1.11
ATG4B-209ENST00000425239 ATP7BP35670 1465 aa21.99■■□□□ 1.11
ATG4B-209ENST00000425239 CCDC9Q9Y3X0 531 aaKnown RBP21.99■■□□□ 1.11
ATG4B-209ENST00000425239 NUDT16Q96DE0 195 aaKnown RBP21.98■■□□□ 1.11
ATG4B-209ENST00000425239 FAM98CQ17RN3 349 aaKnown RBP21.97■■□□□ 1.11
ATG4B-209ENST00000425239 NGDNQ8NEJ9 315 aaKnown RBP21.97■■□□□ 1.11
ATG4B-209ENST00000425239 SPATA31A5Q5VU36 1347 aa21.97■■□□□ 1.11
ATG4B-209ENST00000425239 SPATA31A7Q8IWB4 1347 aa21.97■■□□□ 1.11
ATG4B-209ENST00000425239 CDK19Q9BWU1 502 aa21.94■■□□□ 1.1
ATG4B-209ENST00000425239 POLR3AO14802 1390 aaPredicted RBP21.93■■□□□ 1.1
ATG4B-209ENST00000425239 THSD7AQ9UPZ6 1657 aa21.92■■□□□ 1.1
ATG4B-209ENST00000425239 PAK3O75914 559 aaPredicted RBP21.92■■□□□ 1.1
ATG4B-209ENST00000425239 ITSN1Q15811 1721 aa21.92■■□□□ 1.1
ATG4B-209ENST00000425239 KIAA1210Q9ULL0 1709 aa21.9■■□□□ 1.1
ATG4B-209ENST00000425239 PLEKHG3A1L390 1219 aa21.9■■□□□ 1.1
ATG4B-209ENST00000425239 SF3B2Q13435 895 aaKnown RBP21.9■■□□□ 1.1
ATG4B-209ENST00000425239 NBPF1Q3BBV0 1214 aa21.9■■□□□ 1.1
ATG4B-209ENST00000425239 NBPF8Q3BBV2 869 aa21.9■■□□□ 1.1
ATG4B-209ENST00000425239 FAM182BQ5T319 152 aa21.9■■□□□ 1.1
ATG4B-209ENST00000425239 TOPAZ1Q8N9V7 1692 aa21.9■■□□□ 1.1
ATG4B-209ENST00000425239 KIAA0232Q92628 1395 aa21.89■■□□□ 1.1
ATG4B-209ENST00000425239 ACEP12821 1306 aa21.89■■□□□ 1.1
ATG4B-209ENST00000425239 CCDC61Q9Y6R9 512 aa21.89■■□□□ 1.09
ATG4B-209ENST00000425239 PHRF1Q9P1Y6 1649 aaKnown RBP21.88■■□□□ 1.09
ATG4B-209ENST00000425239 SPATA31A1Q5TZJ5 1347 aa21.88■■□□□ 1.09
ATG4B-209ENST00000425239 PRDM11Q9NQV5 511 aa21.88■■□□□ 1.09
ATG4B-209ENST00000425239 CHRNA2Q15822 529 aa21.86■■□□□ 1.09
ATG4B-209ENST00000425239 A0A0G2JS52 829 aa21.84■■□□□ 1.09
ATG4B-209ENST00000425239 BAG6P46379 1132 aa21.84■■□□□ 1.09
ATG4B-209ENST00000425239 ZC3H6P61129 1189 aaKnown RBP21.84■■□□□ 1.09
ATG4B-209ENST00000425239 MYT1Q01538 1121 aa21.84■■□□□ 1.09
ATG4B-209ENST00000425239 EN1Q05925 392 aaPredicted RBP21.84■■□□□ 1.09
ATG4B-209ENST00000425239 NUTM2GQ5VZR2 741 aa21.84■■□□□ 1.09
ATG4B-209ENST00000425239 DISP2A7MBM2 1401 aa21.82■■□□□ 1.08
ATG4B-209ENST00000425239 RGPD1P0DJD0 1748 aa21.82■■□□□ 1.08
ATG4B-209ENST00000425239 CAMTA1Q9Y6Y1 1673 aa21.82■■□□□ 1.08
ATG4B-209ENST00000425239 LRP5O75197 1615 aa21.81■■□□□ 1.08
ATG4B-209ENST00000425239 TNS1Q9HBL0 1735 aaKnown RBP21.81■■□□□ 1.08
ATG4B-209ENST00000425239 USP19O94966 1318 aa21.8■■□□□ 1.08
ATG4B-209ENST00000425239 NRKQ7Z2Y5 1582 aa21.8■■□□□ 1.08
ATG4B-209ENST00000425239 PSDA5PKW4 1024 aaPredicted RBP21.8■■□□□ 1.08
ATG4B-209ENST00000425239 LMO7Q8WWI1 1683 aa21.79■■□□□ 1.08
ATG4B-209ENST00000425239 CPDO75976 1380 aa21.79■■□□□ 1.08
ATG4B-209ENST00000425239 BARGINQ6ZT62 677 aa21.79■■□□□ 1.08
ATG4B-209ENST00000425239 STRN4Q9NRL3 753 aa21.79■■□□□ 1.08
ATG4B-209ENST00000425239 ABTB2Q8N961 1025 aa21.78■■□□□ 1.08
ATG4B-209ENST00000425239 CAMKK2Q96RR4 588 aa21.78■■□□□ 1.08
ATG4B-209ENST00000425239 SSH2Q76I76 1423 aa21.78■■□□□ 1.08
ATG4B-209ENST00000425239 EZH2Q15910 746 aaKnown RBP21.76■■□□□ 1.07
ATG4B-209ENST00000425239 LARP1Q6PKG0 1096 aaKnown RBP21.76■■□□□ 1.07
ATG4B-209ENST00000425239 CABP2Q9NPB3 220 aa21.76■■□□□ 1.07
ATG4B-209ENST00000425239 PPIP5K1Q6PFW1 1433 aa21.75■■□□□ 1.07
ATG4B-209ENST00000425239 GCP02774 474 aa21.75■■□□□ 1.07
ATG4B-209ENST00000425239 FAM196AQ6ZSG2 479 aa21.75■■□□□ 1.07
ATG4B-209ENST00000425239 CENPJQ9HC77 1338 aaPredicted RBP21.75■■□□□ 1.07
ATG4B-209ENST00000425239 TRIM37O94972 964 aa21.74■■□□□ 1.07
ATG4B-209ENST00000425239 USP35Q9P2H5 1018 aa21.73■■□□□ 1.07
ATG4B-209ENST00000425239 SRPK2P78362 688 aaKnown RBP21.72■■□□□ 1.07
ATG4B-209ENST00000425239 NLRP13Q86W25 1043 aa21.72■■□□□ 1.07
ATG4B-209ENST00000425239 L3MBTL2Q969R5 705 aa21.72■■□□□ 1.07
ATG4B-209ENST00000425239 BRD4O60885 1362 aaPredicted RBP21.72■■□□□ 1.07
ATG4B-209ENST00000425239 EVA1CP58658 441 aa21.71■■□□□ 1.07
ATG4B-209ENST00000425239 R3HDM1Q15032 1099 aaKnown RBP21.71■■□□□ 1.07
ATG4B-209ENST00000425239 CABP1Q9NZU7 370 aa21.71■■□□□ 1.07
ATG4B-209ENST00000425239 TCP11L2Q8N4U5 519 aa21.7■■□□□ 1.06
ATG4B-209ENST00000425239 USP6P35125 1406 aa21.69■■□□□ 1.06
ATG4B-209ENST00000425239 COL5A2P05997 1499 aaPredicted RBP21.69■■□□□ 1.06
ATG4B-209ENST00000425239 QRICH2Q9H0J4 1663 aa21.69■■□□□ 1.06
ATG4B-209ENST00000425239 THRAP3Q9Y2W1 955 aaKnown RBP21.68■■□□□ 1.06
ATG4B-209ENST00000425239 APBA3O96018 575 aa21.67■■□□□ 1.06
ATG4B-209ENST00000425239 SLIT3O75094 1523 aa21.66■■□□□ 1.06
ATG4B-209ENST00000425239 PDE3BQ13370 1112 aa21.66■■□□□ 1.06
ATG4B-209ENST00000425239 COL18A1P39060 1754 aa21.66■■□□□ 1.06
ATG4B-209ENST00000425239 PARP4Q9UKK3 1724 aaKnown RBP21.66■■□□□ 1.06
ATG4B-209ENST00000425239 AATKQ6ZMQ8 1374 aa21.65■■□□□ 1.06
ATG4B-209ENST00000425239 PARD3Q8TEW0 1356 aa21.65■■□□□ 1.06
ATG4B-209ENST00000425239 SIN3AQ96ST3 1273 aa21.65■■□□□ 1.06
ATG4B-209ENST00000425239 RREB1Q92766 1687 aa21.65■■□□□ 1.06
ATG4B-209ENST00000425239 NLRP6P59044 892 aa21.64■■□□□ 1.05
ATG4B-209ENST00000425239 TRPM1Q7Z4N2 1603 aa21.64■■□□□ 1.05
ATG4B-209ENST00000425239 AXIN2Q9Y2T1 843 aa21.63■■□□□ 1.05
ATG4B-209ENST00000425239 PEAK1Q9H792 1746 aa21.63■■□□□ 1.05
ATG4B-209ENST00000425239 CRB1P82279 1406 aa21.63■■□□□ 1.05
ATG4B-209ENST00000425239 PIK3C2AO00443 1686 aa21.63■■□□□ 1.05
ATG4B-209ENST00000425239 NUP188Q5SRE5 1749 aa21.6■■□□□ 1.05
ATG4B-209ENST00000425239 EVC2Q86UK5 1308 aa21.59■■□□□ 1.05
ATG4B-209ENST00000425239 ARHGEF25Q86VW2 580 aa21.58■■□□□ 1.05
ATG4B-209ENST00000425239 TTC21BQ7Z4L5 1316 aa21.57■■□□□ 1.04
ATG4B-209ENST00000425239 CPSF1Q10570 1443 aaKnown RBP21.57■■□□□ 1.04
ATG4B-209ENST00000425239 ZNF692Q9BU19 519 aaPredicted RBP21.57■■□□□ 1.04
ATG4B-209ENST00000425239 SBF2Q86WG5 1849 aa21.57■■□□□ 1.04
ATG4B-209ENST00000425239 AKAP12Q02952 1782 aa21.56■■□□□ 1.04
ATG4B-209ENST00000425239 PTF1AQ7RTS3 328 aa21.55■■□□□ 1.04
ATG4B-209ENST00000425239 LRRC37A3O60309 1634 aa21.55■■□□□ 1.04
ATG4B-209ENST00000425239 WDR17Q8IZU2 1322 aa21.55■■□□□ 1.04
ATG4B-209ENST00000425239 C11orf95C9JLR9 678 aaPredicted RBP21.54■■□□□ 1.04
ATG4B-209ENST00000425239 RGPD5Q99666 1765 aa21.53■■□□□ 1.04
ATG4B-209ENST00000425239 PLSCR1O15162 318 aa21.53■■□□□ 1.04
ATG4B-209ENST00000425239 ROCK2O75116 1388 aaKnown RBP21.52■■□□□ 1.04
ATG4B-209ENST00000425239 ZBTB7CA1YPR0 619 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms