RNA–Protein interactions for RNA: ENST00000425184.5

RBM39-210, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-210ENST00000425184 RC3H1Q5TC82 1133 aaKnown RBP8.72□□□□□ -1.01
RBM39-210ENST00000425184 CYP4X1Q8N118 509 aa8.72□□□□□ -1.01
RBM39-210ENST00000425184 AP1G2O75843 785 aa8.71□□□□□ -1.02
RBM39-210ENST00000425184 BAP1Q92560 729 aa8.71□□□□□ -1.02
RBM39-210ENST00000425184 MRGPRX2Q96LB1 330 aa8.71□□□□□ -1.02
RBM39-210ENST00000425184 RFC5P40937 340 aa8.7□□□□□ -1.02
RBM39-210ENST00000425184 SH3BP2P78314 561 aa8.7□□□□□ -1.02
RBM39-210ENST00000425184 LINC01559Q495D7 138 aa8.7□□□□□ -1.02
RBM39-210ENST00000425184 ZNF511Q8NB15 262 aa8.7□□□□□ -1.02
RBM39-210ENST00000425184 ARMC2Q8NEN0 867 aa8.7□□□□□ -1.02
RBM39-210ENST00000425184 TTC24A2A3L6 582 aaPredicted RBP8.69□□□□□ -1.02
RBM39-210ENST00000425184 DGAT1O75907 488 aa8.69□□□□□ -1.02
RBM39-210ENST00000425184 PKDCCQ504Y2 493 aa8.69□□□□□ -1.02
RBM39-210ENST00000425184 TOR4AQ9NXH8 423 aa8.69□□□□□ -1.02
RBM39-210ENST00000425184 FAM187AA6NFU0 413 aa8.68□□□□□ -1.02
RBM39-210ENST00000425184 TMEM259Q4ZIN3 620 aa8.68□□□□□ -1.02
RBM39-210ENST00000425184 EHBP1Q8NDI1 1231 aa8.68□□□□□ -1.02
RBM39-210ENST00000425184 SNIP1Q8TAD8 396 aaKnown RBP8.68□□□□□ -1.02
RBM39-210ENST00000425184 LRRN4Q8WUT4 740 aa8.68□□□□□ -1.02
RBM39-210ENST00000425184 USP17L8P0C7I0 530 aa8.66□□□□□ -1.02
RBM39-210ENST00000425184 NBPF14Q5TI25 921 aa8.66□□□□□ -1.02
RBM39-210ENST00000425184 TRAF7Q6Q0C0 670 aa8.66□□□□□ -1.02
RBM39-210ENST00000425184 VARSP26640 1264 aaKnown RBP8.64□□□□□ -1.03
RBM39-210ENST00000425184 AGERQ15109 404 aa8.64□□□□□ -1.03
RBM39-210ENST00000425184 NR6A1Q15406 480 aa8.63□□□□□ -1.03
RBM39-210ENST00000425184 BPHLQ86WA6 291 aaPredicted RBP8.63□□□□□ -1.03
RBM39-210ENST00000425184 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.039e-13■□□□□ 9.8
RBM39-210ENST00000425184 FOXJ1Q92949 421 aa8.63□□□□□ -1.03
RBM39-210ENST00000425184 SIAH2O43255 324 aa8.62□□□□□ -1.03
RBM39-210ENST00000425184 ALDH1A1P00352 501 aa8.62□□□□□ -1.03
RBM39-210ENST00000425184 SMPD1P17405 629 aa8.62□□□□□ -1.03
RBM39-210ENST00000425184 PNMA1Q8ND90 353 aa8.62□□□□□ -1.03
RBM39-210ENST00000425184 FAM174AQ8TBP5 190 aa8.62□□□□□ -1.03
RBM39-210ENST00000425184 FKBPLQ9UIM3 349 aa8.62□□□□□ -1.03
RBM39-210ENST00000425184 J3QL48 77 aa8.61□□□□□ -1.03
RBM39-210ENST00000425184 LCE2BO14633 110 aa8.61□□□□□ -1.03
RBM39-210ENST00000425184 MYT1Q01538 1121 aa8.61□□□□□ -1.03
RBM39-210ENST00000425184 HMX1Q9NP08 348 aaPredicted RBP8.61□□□□□ -1.03
RBM39-210ENST00000425184 ZC3H4Q9UPT8 1303 aaKnown RBP8.6□□□□□ -1.03
RBM39-210ENST00000425184 BANK1Q8NDB2 785 aa8.6□□□□□ -1.03
RBM39-210ENST00000425184 AVPP01185 164 aa8.59□□□□□ -1.03
RBM39-210ENST00000425184 SH3BP5LQ7L8J4 393 aa8.59□□□□□ -1.03
RBM39-210ENST00000425184 MPNDQ8N594 471 aa8.59□□□□□ -1.03
RBM39-210ENST00000425184 WASF2Q9Y6W5 498 aa8.59□□□□□ -1.03
RBM39-210ENST00000425184 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
RBM39-210ENST00000425184 PDXDC2PQ6P474 469 aa8.58□□□□□ -1.04
RBM39-210ENST00000425184 EPS8L1Q8TE68 723 aa8.58□□□□□ -1.04
RBM39-210ENST00000425184 TLL2Q9Y6L7 1015 aa8.58□□□□□ -1.04
RBM39-210ENST00000425184 CTC1Q2NKJ3 1217 aa8.57□□□□□ -1.04
RBM39-210ENST00000425184 SH3RF1Q7Z6J0 888 aa8.57□□□□□ -1.04
RBM39-210ENST00000425184 MAGEB6P1A0A0J9YX57 407 aa8.56□□□□□ -1.04
RBM39-210ENST00000425184 CRIPAKQ8N1N5 446 aa8.56□□□□□ -1.04
RBM39-210ENST00000425184 HPS1Q92902 700 aa8.56□□□□□ -1.04
RBM39-210ENST00000425184 ARHGAP9Q9BRR9 750 aa8.56□□□□□ -1.04
RBM39-210ENST00000425184 C1QTNF2Q9BXJ5 285 aa8.56□□□□□ -1.04
RBM39-210ENST00000425184 AXIN1O15169 862 aa8.55□□□□□ -1.04
RBM39-210ENST00000425184 PTK2Q05397 1052 aa8.55□□□□□ -1.04
RBM39-210ENST00000425184 ARID5BQ14865 1188 aa8.55□□□□□ -1.04
RBM39-210ENST00000425184 CDK15Q96Q40 435 aa8.55□□□□□ -1.04
RBM39-210ENST00000425184 CARD14Q9BXL6 1004 aa8.55□□□□□ -1.04
RBM39-210ENST00000425184 TRIM34Q9BYJ4 488 aa8.55□□□□□ -1.04
RBM39-210ENST00000425184 GPSM3Q9Y4H4 160 aa8.55□□□□□ -1.04
RBM39-210ENST00000425184 APBB1O00213 710 aa8.54□□□□□ -1.04
RBM39-210ENST00000425184 SOCS7O14512 581 aa8.54□□□□□ -1.04
RBM39-210ENST00000425184 ST8SIA5O15466 376 aa8.54□□□□□ -1.04
RBM39-210ENST00000425184 SMCPP49901 116 aaPredicted RBP8.54□□□□□ -1.04
RBM39-210ENST00000425184 AAASQ9NRG9 546 aa8.54□□□□□ -1.04
RBM39-210ENST00000425184 ADH1CP00326 375 aa8.53□□□□□ -1.04
RBM39-210ENST00000425184 ZBTB33Q86T24 672 aa8.53□□□□□ -1.04
RBM39-210ENST00000425184 TRMT44Q8IYL2 757 aaKnown RBP8.53□□□□□ -1.04
RBM39-210ENST00000425184 GJD4Q96KN9 370 aaPredicted RBP8.53□□□□□ -1.04
RBM39-210ENST00000425184 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
RBM39-210ENST00000425184 MTMR14Q8NCE2 650 aa8.52□□□□□ -1.05
RBM39-210ENST00000425184 SNRKQ9NRH2 765 aa8.52□□□□□ -1.05
RBM39-210ENST00000425184 NR5A1Q13285 461 aa8.51□□□□□ -1.05
RBM39-210ENST00000425184 NNTQ13423 1086 aa8.51□□□□□ -1.05
RBM39-210ENST00000425184 MAP4K5Q9Y4K4 846 aa8.51□□□□□ -1.05
RBM39-210ENST00000425184 VASH1Q7L8A9 365 aaPredicted RBP8.5□□□□□ -1.05
RBM39-210ENST00000425184 SLC10A4Q96EP9 437 aa8.5□□□□□ -1.05
RBM39-210ENST00000425184 GRM5P41594 1212 aa8.49□□□□□ -1.05
RBM39-210ENST00000425184 ADAM32Q8TC27 787 aa8.49□□□□□ -1.05
RBM39-210ENST00000425184 OCSTAMPQ9BR26 566 aa8.49□□□□□ -1.05
RBM39-210ENST00000425184 NDUFB9Q9Y6M9 179 aa8.49□□□□□ -1.05
RBM39-210ENST00000425184 FSHRP23945 695 aa8.48□□□□□ -1.05
RBM39-210ENST00000425184 CDV3Q9UKY7 258 aaKnown RBP8.48□□□□□ -1.05
RBM39-210ENST00000425184 CAPN5O15484 640 aaPredicted RBP8.47□□□□□ -1.05
RBM39-210ENST00000425184 TMEM132AQ24JP5 1023 aa8.47□□□□□ -1.05
RBM39-210ENST00000425184 ZNF787Q6DD87 383 aa8.47□□□□□ -1.05
RBM39-210ENST00000425184 PRM3Q9NNZ6 103 aa8.47□□□□□ -1.05
RBM39-210ENST00000425184 DACH1Q9UI36 760 aa8.47□□□□□ -1.05
RBM39-210ENST00000425184 ZBBXA8MT70 800 aa8.46□□□□□ -1.06
RBM39-210ENST00000425184 WDR4P57081 412 aaKnown RBP8.46□□□□□ -1.06
RBM39-210ENST00000425184 NR3C2P08235 984 aa8.45□□□□□ -1.06
RBM39-210ENST00000425184 KCTD15Q96SI1 283 aaPredicted RBP8.45□□□□□ -1.06
RBM39-210ENST00000425184 ATP13A2Q9NQ11 1180 aa8.45□□□□□ -1.06
RBM39-210ENST00000425184 FBXO45P0C2W1 286 aa8.44□□□□□ -1.06
RBM39-210ENST00000425184 TIMP2P16035 220 aa8.44□□□□□ -1.06
RBM39-210ENST00000425184 NBPF20Q3BBV1 942 aa8.44□□□□□ -1.06
RBM39-210ENST00000425184 DZIP3Q86Y13 1208 aaKnown RBP8.44□□□□□ -1.06
RBM39-210ENST00000425184 KLF16Q9BXK1 252 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms