RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 ZEB1P37275 1124 aaPredicted RBP20.62■□□□□ 0.89
TMEM248-204ENST00000424964 HAP1P54257 671 aaPredicted RBP20.62■□□□□ 0.89
TMEM248-204ENST00000424964 AKAP12Q02952 1782 aa20.62■□□□□ 0.89
TMEM248-204ENST00000424964 KTN1Q86UP2 1357 aaKnown RBP20.61■□□□□ 0.89
TMEM248-204ENST00000424964 NINLQ9Y2I6 1382 aa20.61■□□□□ 0.89
TMEM248-204ENST00000424964 COL22A1Q8NFW1 1626 aaPredicted RBP20.61■□□□□ 0.89
TMEM248-204ENST00000424964 ADAMTS2O95450 1211 aa20.61■□□□□ 0.89
TMEM248-204ENST00000424964 ABTB2Q8N961 1025 aa20.61■□□□□ 0.89
TMEM248-204ENST00000424964 CABLES1Q8TDN4 633 aa20.61■□□□□ 0.89
TMEM248-204ENST00000424964 CPSF1Q10570 1443 aaKnown RBP20.61■□□□□ 0.89
TMEM248-204ENST00000424964 BRD4O60885 1362 aaPredicted RBP20.6■□□□□ 0.89
TMEM248-204ENST00000424964 NUTM2GQ5VZR2 741 aa20.6■□□□□ 0.89
TMEM248-204ENST00000424964 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
TMEM248-204ENST00000424964 ALS2Q96Q42 1657 aa20.6■□□□□ 0.89
TMEM248-204ENST00000424964 LRP6O75581 1613 aa20.6■□□□□ 0.89
TMEM248-204ENST00000424964 TTC21BQ7Z4L5 1316 aa20.57■□□□□ 0.88
TMEM248-204ENST00000424964 CD163L1Q9NR16 1453 aa20.57■□□□□ 0.88
TMEM248-204ENST00000424964 A0A1W2PP64 1363 aa20.57■□□□□ 0.88
TMEM248-204ENST00000424964 C11orf95C9JLR9 678 aaPredicted RBP20.56■□□□□ 0.88
TMEM248-204ENST00000424964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.56■□□□□ 0.88
TMEM248-204ENST00000424964 SSH2Q76I76 1423 aa20.55■□□□□ 0.88
TMEM248-204ENST00000424964 NLRP13Q86W25 1043 aa20.55■□□□□ 0.88
TMEM248-204ENST00000424964 C8orf37Q96NL8 207 aa20.55■□□□□ 0.88
TMEM248-204ENST00000424964 MON2Q7Z3U7 1717 aa20.55■□□□□ 0.88
TMEM248-204ENST00000424964 TTC21AQ8NDW8 1320 aa20.54■□□□□ 0.88
TMEM248-204ENST00000424964 NLRP6P59044 892 aa20.54■□□□□ 0.88
TMEM248-204ENST00000424964 ANKRD36BQ8N2N9 1353 aa20.54■□□□□ 0.88
TMEM248-204ENST00000424964 NGLY1Q96IV0 654 aa20.53■□□□□ 0.88
TMEM248-204ENST00000424964 EDC4Q6P2E9 1401 aaKnown RBP20.52■□□□□ 0.87
TMEM248-204ENST00000424964 MYOM1P52179 1685 aa20.51■□□□□ 0.87
TMEM248-204ENST00000424964 NRKQ7Z2Y5 1582 aa20.5■□□□□ 0.87
TMEM248-204ENST00000424964 KIF7Q2M1P5 1343 aa20.5■□□□□ 0.87
TMEM248-204ENST00000424964 ABCA3Q99758 1704 aa20.5■□□□□ 0.87
TMEM248-204ENST00000424964 NME9Q86XW9 330 aa20.49■□□□□ 0.87
TMEM248-204ENST00000424964 AFF2P51816 1311 aa20.49■□□□□ 0.87
TMEM248-204ENST00000424964 PIK3C2AO00443 1686 aa20.48■□□□□ 0.87
TMEM248-204ENST00000424964 MARF1Q9Y4F3 1742 aaKnown RBP20.48■□□□□ 0.87
TMEM248-204ENST00000424964 ZC3H6P61129 1189 aaKnown RBP20.47■□□□□ 0.87
TMEM248-204ENST00000424964 RGS17Q9UGC6 210 aaPredicted RBP20.47■□□□□ 0.87
TMEM248-204ENST00000424964 ZRANB1Q9UGI0 708 aa20.47■□□□□ 0.87
TMEM248-204ENST00000424964 USP19O94966 1318 aa20.47■□□□□ 0.87
TMEM248-204ENST00000424964 GCP02774 474 aa20.46■□□□□ 0.87
TMEM248-204ENST00000424964 CARD14Q9BXL6 1004 aa20.46■□□□□ 0.87
TMEM248-204ENST00000424964 CRYBG1Q9Y4K1 1723 aa20.46■□□□□ 0.87
TMEM248-204ENST00000424964 PHRF1Q9P1Y6 1649 aaKnown RBP20.45■□□□□ 0.87
TMEM248-204ENST00000424964 ZNF772Q68DY9 489 aaPredicted RBP20.45■□□□□ 0.86
TMEM248-204ENST00000424964 PANK3Q9H999 370 aa20.45■□□□□ 0.86
TMEM248-204ENST00000424964 FAM83GA6ND36 823 aa20.44■□□□□ 0.86
TMEM248-204ENST00000424964 SOX12O15370 315 aa20.44■□□□□ 0.86
TMEM248-204ENST00000424964 PRDM11Q9NQV5 511 aa20.44■□□□□ 0.86
TMEM248-204ENST00000424964 USP21Q9UK80 565 aa20.44■□□□□ 0.86
TMEM248-204ENST00000424964 CCDC7Q96M83 1385 aa20.44■□□□□ 0.86
TMEM248-204ENST00000424964 FNBP4Q8N3X1 1017 aaPredicted RBP20.43■□□□□ 0.86
TMEM248-204ENST00000424964 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
TMEM248-204ENST00000424964 USP31Q70CQ4 1352 aa20.43■□□□□ 0.86
TMEM248-204ENST00000424964 NSD3Q9BZ95 1437 aa20.43■□□□□ 0.86
TMEM248-204ENST00000424964 ZBTB7CA1YPR0 619 aa20.42■□□□□ 0.86
TMEM248-204ENST00000424964 KCNH5Q8NCM2 988 aa20.42■□□□□ 0.86
TMEM248-204ENST00000424964 KIAA0232Q92628 1395 aa20.42■□□□□ 0.86
TMEM248-204ENST00000424964 CHRNA2Q15822 529 aa20.41■□□□□ 0.86
TMEM248-204ENST00000424964 COG3Q96JB2 828 aa20.41■□□□□ 0.86
TMEM248-204ENST00000424964 FYB1O15117 783 aa20.4■□□□□ 0.86
TMEM248-204ENST00000424964 SLIT3O75094 1523 aa20.4■□□□□ 0.86
TMEM248-204ENST00000424964 POTEAQ6S8J7 498 aa20.4■□□□□ 0.86
TMEM248-204ENST00000424964 GGNBP2Q9H3C7 697 aa20.4■□□□□ 0.86
TMEM248-204ENST00000424964 QTRT2Q9H974 415 aaKnown RBP20.39■□□□□ 0.85
TMEM248-204ENST00000424964 CGNL1Q0VF96 1302 aa20.38■□□□□ 0.85
TMEM248-204ENST00000424964 BTG4Q9NY30 223 aa20.38■□□□□ 0.85
TMEM248-204ENST00000424964 COL14A1Q05707 1796 aaKnown RBP20.38■□□□□ 0.85
TMEM248-204ENST00000424964 UNC5CLQ8IV45 518 aa20.37■□□□□ 0.85
TMEM248-204ENST00000424964 SLIT2O94813 1529 aa20.37■□□□□ 0.85
TMEM248-204ENST00000424964 KIF20BQ96Q89 1820 aa20.37■□□□□ 0.85
TMEM248-204ENST00000424964 OVOS2A0A0J9YW53 1432 aa20.36■□□□□ 0.85
TMEM248-204ENST00000424964 OVOS2Q6IE36 1432 aa20.36■□□□□ 0.85
TMEM248-204ENST00000424964 CPDO75976 1380 aa20.36■□□□□ 0.85
TMEM248-204ENST00000424964 USP54Q70EL1 1684 aa20.36■□□□□ 0.85
TMEM248-204ENST00000424964 TRPC5Q9UL62 973 aaPredicted RBP20.36■□□□□ 0.85
TMEM248-204ENST00000424964 BCL9LQ86UU0 1499 aa20.36■□□□□ 0.85
TMEM248-204ENST00000424964 PLCH1Q4KWH8 1693 aa20.35■□□□□ 0.85
TMEM248-204ENST00000424964 KNSTRNQ9Y448 316 aa20.35■□□□□ 0.85
TMEM248-204ENST00000424964 ARHGEF25Q86VW2 580 aa20.34■□□□□ 0.85
TMEM248-204ENST00000424964 NWD2Q9ULI1 1742 aa20.33■□□□□ 0.85
TMEM248-204ENST00000424964 RXRBP28702 533 aa20.33■□□□□ 0.85
TMEM248-204ENST00000424964 EVA1CP58658 441 aa20.33■□□□□ 0.85
TMEM248-204ENST00000424964 CCDC9Q9Y3X0 531 aaKnown RBP20.33■□□□□ 0.85
TMEM248-204ENST00000424964 STRN4Q9NRL3 753 aa20.32■□□□□ 0.84
TMEM248-204ENST00000424964 NFAT5O94916 1531 aa20.32■□□□□ 0.84
TMEM248-204ENST00000424964 AATKQ6ZMQ8 1374 aa20.31■□□□□ 0.84
TMEM248-204ENST00000424964 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.3■□□□□ 0.84
TMEM248-204ENST00000424964 ATRNO75882 1429 aa20.3■□□□□ 0.84
TMEM248-204ENST00000424964 FBLN1P23142 703 aa20.3■□□□□ 0.84
TMEM248-204ENST00000424964 RBM6P78332 1123 aaKnown RBP20.3■□□□□ 0.84
TMEM248-204ENST00000424964 ILDR2Q71H61 639 aa20.3■□□□□ 0.84
TMEM248-204ENST00000424964 VPS72Q15906 364 aa20.29■□□□□ 0.84
TMEM248-204ENST00000424964 GJD4Q96KN9 370 aaPredicted RBP20.29■□□□□ 0.84
TMEM248-204ENST00000424964 CAMTA1Q9Y6Y1 1673 aa20.29■□□□□ 0.84
TMEM248-204ENST00000424964 NRAPQ86VF7 1730 aa20.28■□□□□ 0.84
TMEM248-204ENST00000424964 LTN1O94822 1766 aa20.27■□□□□ 0.84
TMEM248-204ENST00000424964 LMO7Q8WWI1 1683 aa20.27■□□□□ 0.84
TMEM248-204ENST00000424964 PER1O15534 1290 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms