RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 ZNF335Q9H4Z2 1342 aaPredicted RBP20.14■□□□□ 0.81
CALD1-206ENST00000424922 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
CALD1-206ENST00000424922 NEFLP07196 543 aa20.13■□□□□ 0.81
CALD1-206ENST00000424922 NGDNQ8NEJ9 315 aaKnown RBP20.13■□□□□ 0.81
CALD1-206ENST00000424922 DMRT2Q9Y5R5 561 aa20.12■□□□□ 0.81
CALD1-206ENST00000424922 POLR3AO14802 1390 aaPredicted RBP20.12■□□□□ 0.81
CALD1-206ENST00000424922 USP6P35125 1406 aa20.12■□□□□ 0.81
CALD1-206ENST00000424922 NCOA3Q9Y6Q9 1424 aa20.1■□□□□ 0.81
CALD1-206ENST00000424922 FKBP8Q14318 412 aa20.1■□□□□ 0.81
CALD1-206ENST00000424922 NME9Q86XW9 330 aa20.1■□□□□ 0.81
CALD1-206ENST00000424922 ESCO1Q5FWF5 840 aa20.09■□□□□ 0.81
CALD1-206ENST00000424922 PHF8Q9UPP1 1060 aa20.09■□□□□ 0.81
CALD1-206ENST00000424922 TTC21BQ7Z4L5 1316 aa20.09■□□□□ 0.81
CALD1-206ENST00000424922 MAP2P11137 1827 aaKnown RBP20.08■□□□□ 0.81
CALD1-206ENST00000424922 LRRC7Q96NW7 1537 aa20.08■□□□□ 0.8
CALD1-206ENST00000424922 ATF3P18847 181 aa20.07■□□□□ 0.8
CALD1-206ENST00000424922 ZRANB1Q9UGI0 708 aa20.07■□□□□ 0.8
CALD1-206ENST00000424922 ZBED9Q6R2W3 1325 aa20.06■□□□□ 0.8
CALD1-206ENST00000424922 SSH2Q76I76 1423 aa20.06■□□□□ 0.8
CALD1-206ENST00000424922 DCCP43146 1447 aa20.06■□□□□ 0.8
CALD1-206ENST00000424922 ORAI2Q96SN7 254 aa20.05■□□□□ 0.8
CALD1-206ENST00000424922 MSH6P52701 1360 aa20.05■□□□□ 0.8
CALD1-206ENST00000424922 MTHFSP49914 203 aa20.05■□□□□ 0.8
CALD1-206ENST00000424922 C1orf167Q5SNV9 1468 aa20.04■□□□□ 0.8
CALD1-206ENST00000424922 COG3Q96JB2 828 aa20.04■□□□□ 0.8
CALD1-206ENST00000424922 MST1RQ04912 1400 aa20.02■□□□□ 0.8
CALD1-206ENST00000424922 TTC21AQ8NDW8 1320 aa20.02■□□□□ 0.8
CALD1-206ENST00000424922 CADPS2Q86UW7 1296 aa20.02■□□□□ 0.79
CALD1-206ENST00000424922 PIK3C2AO00443 1686 aa20.01■□□□□ 0.79
CALD1-206ENST00000424922 KIF1AQ12756 1690 aa20.01■□□□□ 0.79
CALD1-206ENST00000424922 FBLN1P23142 703 aa20■□□□□ 0.79
CALD1-206ENST00000424922 PSME1Q06323 249 aa20■□□□□ 0.79
CALD1-206ENST00000424922 WDR43Q15061 677 aaKnown RBP eCLIP19.99■□□□□ 0.79
CALD1-206ENST00000424922 SHPRHQ149N8 1683 aa19.99■□□□□ 0.79
CALD1-206ENST00000424922 FOXO3O43524 673 aa19.99■□□□□ 0.79
CALD1-206ENST00000424922 PAK3O75914 559 aaPredicted RBP19.99■□□□□ 0.79
CALD1-206ENST00000424922 OVOS2A0A0J9YW53 1432 aa19.98■□□□□ 0.79
CALD1-206ENST00000424922 OVOS2Q6IE36 1432 aa19.98■□□□□ 0.79
CALD1-206ENST00000424922 CFAP53Q96M91 514 aa19.98■□□□□ 0.79
CALD1-206ENST00000424922 ADAMTS8Q9UP79 889 aa19.98■□□□□ 0.79
CALD1-206ENST00000424922 MARF1Q9Y4F3 1742 aaKnown RBP19.97■□□□□ 0.79
CALD1-206ENST00000424922 ERICH6BQ5W0A0 696 aa19.96■□□□□ 0.79
CALD1-206ENST00000424922 POLKQ9UBT6 870 aa19.96■□□□□ 0.79
CALD1-206ENST00000424922 SENP3-EIF4A1A0A087X0R7 540 aa19.95■□□□□ 0.78
CALD1-206ENST00000424922 XPCQ01831 940 aaPredicted RBP19.95■□□□□ 0.78
CALD1-206ENST00000424922 ABTB2Q8N961 1025 aa19.95■□□□□ 0.78
CALD1-206ENST00000424922 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.78
CALD1-206ENST00000424922 PPM1GO15355 546 aaPredicted RBP19.94■□□□□ 0.78
CALD1-206ENST00000424922 NUTM2GQ5VZR2 741 aa19.94■□□□□ 0.78
CALD1-206ENST00000424922 NLRP6P59044 892 aa19.94■□□□□ 0.78
CALD1-206ENST00000424922 USP54Q70EL1 1684 aa19.94■□□□□ 0.78
CALD1-206ENST00000424922 USP31Q70CQ4 1352 aa19.93■□□□□ 0.78
CALD1-206ENST00000424922 TRPM3Q9HCF6 1732 aaPredicted RBP19.93■□□□□ 0.78
CALD1-206ENST00000424922 BLMP54132 1417 aaPredicted RBP19.93■□□□□ 0.78
CALD1-206ENST00000424922 RRS1Q15050 365 aaKnown RBP19.93■□□□□ 0.78
CALD1-206ENST00000424922 EMILIN1Q9Y6C2 1016 aa19.93■□□□□ 0.78
CALD1-206ENST00000424922 INSRP06213 1382 aa19.92■□□□□ 0.78
CALD1-206ENST00000424922 COL3A1P02461 1466 aaPredicted RBP19.92■□□□□ 0.78
CALD1-206ENST00000424922 SOX12O15370 315 aa19.91■□□□□ 0.78
CALD1-206ENST00000424922 KRT28Q7Z3Y7 464 aa19.91■□□□□ 0.78
CALD1-206ENST00000424922 SLAIN2Q9P270 581 aa19.9■□□□□ 0.78
CALD1-206ENST00000424922 PNPLA6Q8IY17 1366 aa19.9■□□□□ 0.78
CALD1-206ENST00000424922 DDX17Q92841 729 aaKnown RBP19.9■□□□□ 0.78
CALD1-206ENST00000424922 SMG6Q86US8 1419 aaKnown RBP19.9■□□□□ 0.78
CALD1-206ENST00000424922 LTBP4Q8N2S1 1624 aa19.89■□□□□ 0.78
CALD1-206ENST00000424922 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
CALD1-206ENST00000424922 CDK12Q9NYV4 1490 aaPredicted RBP19.88■□□□□ 0.77
CALD1-206ENST00000424922 BRINP3Q76B58 766 aa19.87■□□□□ 0.77
CALD1-206ENST00000424922 PEAK1Q9H792 1746 aa19.87■□□□□ 0.77
CALD1-206ENST00000424922 DIAPH1O60610 1272 aaKnown RBP19.87■□□□□ 0.77
CALD1-206ENST00000424922 CCDC146Q8IYE0 955 aa19.87■□□□□ 0.77
CALD1-206ENST00000424922 NPHP3Q7Z494 1330 aa19.86■□□□□ 0.77
CALD1-206ENST00000424922 LMOD2Q6P5Q4 547 aa19.86■□□□□ 0.77
CALD1-206ENST00000424922 NUDCQ9Y266 331 aa19.86■□□□□ 0.77
CALD1-206ENST00000424922 ALS2Q96Q42 1657 aa19.86■□□□□ 0.77
CALD1-206ENST00000424922 TSHZ2Q9NRE2 1034 aa19.85■□□□□ 0.77
CALD1-206ENST00000424922 SALL2Q9Y467 1007 aaPredicted RBP19.85■□□□□ 0.77
CALD1-206ENST00000424922 U2SURPO15042 1029 aaKnown RBP19.85■□□□□ 0.77
CALD1-206ENST00000424922 U2AF1L5P0DN76 240 aaPredicted RBP19.85■□□□□ 0.77
CALD1-206ENST00000424922 U2AF1Q01081 240 aaKnown RBP eCLIP19.85■□□□□ 0.77
CALD1-206ENST00000424922 LTN1O94822 1766 aa19.85■□□□□ 0.77
CALD1-206ENST00000424922 MAP3K19Q56UN5 1328 aa19.83■□□□□ 0.77
CALD1-206ENST00000424922 PXDNQ92626 1479 aa19.82■□□□□ 0.76
CALD1-206ENST00000424922 PLEKHG5O94827 1062 aa19.81■□□□□ 0.76
CALD1-206ENST00000424922 SBNO1A3KN83 1393 aa19.8■□□□□ 0.76
CALD1-206ENST00000424922 NFAT5O94916 1531 aa19.79■□□□□ 0.76
CALD1-206ENST00000424922 IL13P35225 146 aa19.79■□□□□ 0.76
CALD1-206ENST00000424922 APAF1O14727 1248 aa19.79■□□□□ 0.76
CALD1-206ENST00000424922 AMPHP49418 695 aa19.79■□□□□ 0.76
CALD1-206ENST00000424922 HSP90AB2PQ58FF8 381 aa19.79■□□□□ 0.76
CALD1-206ENST00000424922 RUNDC1Q96C34 613 aa19.78■□□□□ 0.76
CALD1-206ENST00000424922 KCNH5Q8NCM2 988 aa19.78■□□□□ 0.76
CALD1-206ENST00000424922 SLIT3O75094 1523 aa19.77■□□□□ 0.76
CALD1-206ENST00000424922 FLT4P35916 1363 aa19.77■□□□□ 0.76
CALD1-206ENST00000424922 NHSL1Q5SYE7 1610 aa19.77■□□□□ 0.76
CALD1-206ENST00000424922 TNS3Q68CZ2 1445 aa19.77■□□□□ 0.76
CALD1-206ENST00000424922 GCP02774 474 aa19.76■□□□□ 0.75
CALD1-206ENST00000424922 EIF4A2Q14240 407 aaKnown RBP19.76■□□□□ 0.75
CALD1-206ENST00000424922 PPP4R2Q9NY27 417 aa19.76■□□□□ 0.75
CALD1-206ENST00000424922 USP19O94966 1318 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms