RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 GLI3P10071 1580 aa26.54■■□□□ 1.84
NUP50-207ENST00000424634 NBPF8Q3BBV2 869 aa26.53■■□□□ 1.84
NUP50-207ENST00000424634 RALGAPBQ86X10 1494 aa26.53■■□□□ 1.84
NUP50-207ENST00000424634 QRICH2Q9H0J4 1663 aa26.53■■□□□ 1.84
NUP50-207ENST00000424634 CABP2Q9NPB3 220 aa26.52■■□□□ 1.84
NUP50-207ENST00000424634 NWD2Q9ULI1 1742 aa26.52■■□□□ 1.84
NUP50-207ENST00000424634 CRYBG1Q9Y4K1 1723 aa26.52■■□□□ 1.84
NUP50-207ENST00000424634 SRPK2P78362 688 aaKnown RBP26.51■■□□□ 1.83
NUP50-207ENST00000424634 TRIM26Q12899 539 aaPredicted RBP26.51■■□□□ 1.83
NUP50-207ENST00000424634 VPS72Q15906 364 aa26.5■■□□□ 1.83
NUP50-207ENST00000424634 EP400Q96L91 3159 aa26.49■■□□□ 1.83
NUP50-207ENST00000424634 ROCK2O75116 1388 aaKnown RBP26.47■■□□□ 1.83
NUP50-207ENST00000424634 ATAD2Q6PL18 1390 aa26.47■■□□□ 1.83
NUP50-207ENST00000424634 NUTM2GQ5VZR2 741 aa26.46■■□□□ 1.83
NUP50-207ENST00000424634 BTG4Q9NY30 223 aa26.46■■□□□ 1.83
NUP50-207ENST00000424634 PPIP5K1Q6PFW1 1433 aa26.46■■□□□ 1.83
NUP50-207ENST00000424634 COL14A1Q05707 1796 aaKnown RBP26.44■■□□□ 1.82
NUP50-207ENST00000424634 NRAPQ86VF7 1730 aa26.44■■□□□ 1.82
NUP50-207ENST00000424634 CCDC9Q9Y3X0 531 aaKnown RBP26.43■■□□□ 1.82
NUP50-207ENST00000424634 BRWD3Q6RI45 1802 aa26.43■■□□□ 1.82
NUP50-207ENST00000424634 ONECUT3O60422 494 aaPredicted RBP26.42■■□□□ 1.82
NUP50-207ENST00000424634 CABP1Q9NZU7 370 aa26.42■■□□□ 1.82
NUP50-207ENST00000424634 SEPT12Q8IYM1 358 aa26.41■■□□□ 1.82
NUP50-207ENST00000424634 PHRF1Q9P1Y6 1649 aaKnown RBP26.4■■□□□ 1.82
NUP50-207ENST00000424634 EVC2Q86UK5 1308 aa26.39■■□□□ 1.82
NUP50-207ENST00000424634 KIAA0232Q92628 1395 aa26.39■■□□□ 1.82
NUP50-207ENST00000424634 ABTB2Q8N961 1025 aa26.39■■□□□ 1.82
NUP50-207ENST00000424634 PRDM11Q9NQV5 511 aa26.39■■□□□ 1.82
NUP50-207ENST00000424634 ZC3H6P61129 1189 aaKnown RBP26.37■■□□□ 1.81
NUP50-207ENST00000424634 CHRNA2Q15822 529 aa26.37■■□□□ 1.81
NUP50-207ENST00000424634 TONSLQ96HA7 1378 aa26.35■■□□□ 1.81
NUP50-207ENST00000424634 FAM98CQ17RN3 349 aaKnown RBP26.33■■□□□ 1.81
NUP50-207ENST00000424634 CARD11Q9BXL7 1154 aa26.33■■□□□ 1.81
NUP50-207ENST00000424634 USP19O94966 1318 aa26.33■■□□□ 1.81
NUP50-207ENST00000424634 SPATA31A5Q5VU36 1347 aa26.33■■□□□ 1.81
NUP50-207ENST00000424634 SPATA31A7Q8IWB4 1347 aa26.33■■□□□ 1.81
NUP50-207ENST00000424634 USP6P35125 1406 aa26.32■■□□□ 1.8
NUP50-207ENST00000424634 BRD4O60885 1362 aaPredicted RBP26.32■■□□□ 1.8
NUP50-207ENST00000424634 NLRP13Q86W25 1043 aa26.31■■□□□ 1.8
NUP50-207ENST00000424634 NRKQ7Z2Y5 1582 aa26.31■■□□□ 1.8
NUP50-207ENST00000424634 SSH2Q76I76 1423 aa26.31■■□□□ 1.8
NUP50-207ENST00000424634 CCDC125Q86Z20 511 aa26.3■■□□□ 1.8
NUP50-207ENST00000424634 GCP02774 474 aa26.29■■□□□ 1.8
NUP50-207ENST00000424634 KRT27Q7Z3Y8 459 aa26.29■■□□□ 1.8
NUP50-207ENST00000424634 STRN4Q9NRL3 753 aa26.27■■□□□ 1.8
NUP50-207ENST00000424634 CPDO75976 1380 aa26.26■■□□□ 1.79
NUP50-207ENST00000424634 SBNO2Q9Y2G9 1366 aa26.26■■□□□ 1.79
NUP50-207ENST00000424634 A0A0G2JS52 829 aa26.26■■□□□ 1.79
NUP50-207ENST00000424634 MYT1Q01538 1121 aa26.26■■□□□ 1.79
NUP50-207ENST00000424634 CAMTA1Q9Y6Y1 1673 aa26.25■■□□□ 1.79
NUP50-207ENST00000424634 SPATA31A1Q5TZJ5 1347 aa26.25■■□□□ 1.79
NUP50-207ENST00000424634 NLRP6P59044 892 aa26.25■■□□□ 1.79
NUP50-207ENST00000424634 AKAP12Q02952 1782 aa26.25■■□□□ 1.79
NUP50-207ENST00000424634 ZNF692Q9BU19 519 aaPredicted RBP26.24■■□□□ 1.79
NUP50-207ENST00000424634 PIK3C2AO00443 1686 aa26.23■■□□□ 1.79
NUP50-207ENST00000424634 LMO7Q8WWI1 1683 aa26.23■■□□□ 1.79
NUP50-207ENST00000424634 BLMP54132 1417 aaPredicted RBP26.22■■□□□ 1.79
NUP50-207ENST00000424634 CPSF1Q10570 1443 aaKnown RBP26.22■■□□□ 1.79
NUP50-207ENST00000424634 TTC21BQ7Z4L5 1316 aa26.22■■□□□ 1.79
NUP50-207ENST00000424634 EVA1CP58658 441 aa26.21■■□□□ 1.79
NUP50-207ENST00000424634 THSD7AQ9UPZ6 1657 aa26.21■■□□□ 1.79
NUP50-207ENST00000424634 SLIT3O75094 1523 aa26.19■■□□□ 1.78
NUP50-207ENST00000424634 LARP1Q6PKG0 1096 aaKnown RBP26.19■■□□□ 1.78
NUP50-207ENST00000424634 FAM182BQ5T319 152 aa26.18■■□□□ 1.78
NUP50-207ENST00000424634 DEFB132Q7Z7B7 95 aa26.18■■□□□ 1.78
NUP50-207ENST00000424634 USP35Q9P2H5 1018 aa26.18■■□□□ 1.78
NUP50-207ENST00000424634 KTN1Q86UP2 1357 aaKnown RBP26.17■■□□□ 1.78
NUP50-207ENST00000424634 ZBTB7CA1YPR0 619 aa26.15■■□□□ 1.78
NUP50-207ENST00000424634 CD163L1Q9NR16 1453 aa26.15■■□□□ 1.78
NUP50-207ENST00000424634 TTC21AQ8NDW8 1320 aa26.14■■□□□ 1.78
NUP50-207ENST00000424634 TESK2Q96S53 571 aa26.14■■□□□ 1.78
NUP50-207ENST00000424634 SLC12A5Q9H2X9 1139 aa26.14■■□□□ 1.78
NUP50-207ENST00000424634 MON2Q7Z3U7 1717 aa26.14■■□□□ 1.77
NUP50-207ENST00000424634 COL18A1P39060 1754 aa26.13■■□□□ 1.77
NUP50-207ENST00000424634 COL5A2P05997 1499 aaPredicted RBP26.13■■□□□ 1.77
NUP50-207ENST00000424634 AATKQ6ZMQ8 1374 aa26.13■■□□□ 1.77
NUP50-207ENST00000424634 ST20-MTHFSA0A0A6YYL1 179 aa26.13■■□□□ 1.77
NUP50-207ENST00000424634 BARGINQ6ZT62 677 aa26.13■■□□□ 1.77
NUP50-207ENST00000424634 TMC1Q8TDI8 760 aa26.12■■□□□ 1.77
NUP50-207ENST00000424634 ZRANB1Q9UGI0 708 aa26.12■■□□□ 1.77
NUP50-207ENST00000424634 SF3B2Q13435 895 aaKnown RBP26.11■■□□□ 1.77
NUP50-207ENST00000424634 AXIN2Q9Y2T1 843 aa26.11■■□□□ 1.77
NUP50-207ENST00000424634 SRCAPQ6ZRS2 3230 aa26.1■■□□□ 1.77
NUP50-207ENST00000424634 ARHGEF25Q86VW2 580 aa26.1■■□□□ 1.77
NUP50-207ENST00000424634 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.1■■□□□ 1.77
NUP50-207ENST00000424634 TCP11L2Q8N4U5 519 aa26.1■■□□□ 1.77
NUP50-207ENST00000424634 PUS7Q96PZ0 661 aaKnown RBP26.1■■□□□ 1.77
NUP50-207ENST00000424634 SOX12O15370 315 aa26.08■■□□□ 1.77
NUP50-207ENST00000424634 KCNH5Q8NCM2 988 aa26.08■■□□□ 1.77
NUP50-207ENST00000424634 RGPD5Q99666 1765 aa26.06■■□□□ 1.76
NUP50-207ENST00000424634 NME9Q86XW9 330 aa26.06■■□□□ 1.76
NUP50-207ENST00000424634 PCGF6Q9BYE7 350 aa26.06■■□□□ 1.76
NUP50-207ENST00000424634 THRAP3Q9Y2W1 955 aaKnown RBP26.06■■□□□ 1.76
NUP50-207ENST00000424634 CRB1P82279 1406 aa26.05■■□□□ 1.76
NUP50-207ENST00000424634 NFAT5O94916 1531 aa26.05■■□□□ 1.76
NUP50-207ENST00000424634 HDGFL2Q7Z4V5 671 aaPredicted RBP26.05■■□□□ 1.76
NUP50-207ENST00000424634 USP31Q70CQ4 1352 aa26.05■■□□□ 1.76
NUP50-207ENST00000424634 A0A1W2PP64 1363 aa26.03■■□□□ 1.76
NUP50-207ENST00000424634 RGPD1P0DJD0 1748 aa26.02■■□□□ 1.76
NUP50-207ENST00000424634 BAG6P46379 1132 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms