RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 PLEKHG5O94827 1062 aa23.36■■□□□ 1.33
DDR1-234ENST00000424544 NBPF8Q3BBV2 869 aa23.36■■□□□ 1.33
DDR1-234ENST00000424544 CCDC125Q86Z20 511 aa23.36■■□□□ 1.33
DDR1-234ENST00000424544 ACEP12821 1306 aa23.34■■□□□ 1.33
DDR1-234ENST00000424544 SEPT12Q8IYM1 358 aa23.34■■□□□ 1.33
DDR1-234ENST00000424544 BTG4Q9NY30 223 aa23.33■■□□□ 1.33
DDR1-234ENST00000424544 PLCH1Q4KWH8 1693 aa23.32■■□□□ 1.32
DDR1-234ENST00000424544 PAK3O75914 559 aaPredicted RBP23.32■■□□□ 1.32
DDR1-234ENST00000424544 ITSN1Q15811 1721 aa23.32■■□□□ 1.32
DDR1-234ENST00000424544 CENPJQ9HC77 1338 aaPredicted RBP23.32■■□□□ 1.32
DDR1-234ENST00000424544 CRYBG1Q9Y4K1 1723 aa23.31■■□□□ 1.32
DDR1-234ENST00000424544 SRCAPQ6ZRS2 3230 aa23.31■■□□□ 1.32
DDR1-234ENST00000424544 TOPAZ1Q8N9V7 1692 aa23.29■■□□□ 1.32
DDR1-234ENST00000424544 NRAPQ86VF7 1730 aa23.28■■□□□ 1.32
DDR1-234ENST00000424544 COL14A1Q05707 1796 aaKnown RBP23.27■■□□□ 1.32
DDR1-234ENST00000424544 BRWD3Q6RI45 1802 aa23.27■■□□□ 1.32
DDR1-234ENST00000424544 CABP2Q9NPB3 220 aa23.26■■□□□ 1.31
DDR1-234ENST00000424544 SPATA31A5Q5VU36 1347 aa23.26■■□□□ 1.31
DDR1-234ENST00000424544 SPATA31A7Q8IWB4 1347 aa23.26■■□□□ 1.31
DDR1-234ENST00000424544 NEUROD1Q13562 356 aa23.25■■□□□ 1.31
DDR1-234ENST00000424544 CCDC9Q9Y3X0 531 aaKnown RBP23.25■■□□□ 1.31
DDR1-234ENST00000424544 SRPK2P78362 688 aaKnown RBP23.24■■□□□ 1.31
DDR1-234ENST00000424544 PRDM11Q9NQV5 511 aa23.24■■□□□ 1.31
DDR1-234ENST00000424544 KRT27Q7Z3Y8 459 aa23.23■■□□□ 1.31
DDR1-234ENST00000424544 KIAA0232Q92628 1395 aa23.23■■□□□ 1.31
DDR1-234ENST00000424544 FAM98CQ17RN3 349 aaKnown RBP23.22■■□□□ 1.31
DDR1-234ENST00000424544 NUTM2GQ5VZR2 741 aa23.22■■□□□ 1.31
DDR1-234ENST00000424544 BLMP54132 1417 aaPredicted RBP23.22■■□□□ 1.31
DDR1-234ENST00000424544 PPIP5K1Q6PFW1 1433 aa23.22■■□□□ 1.31
DDR1-234ENST00000424544 ABTB2Q8N961 1025 aa23.21■■□□□ 1.31
DDR1-234ENST00000424544 CABP1Q9NZU7 370 aa23.21■■□□□ 1.31
DDR1-234ENST00000424544 BRD4O60885 1362 aaPredicted RBP23.21■■□□□ 1.31
DDR1-234ENST00000424544 TRPM1Q7Z4N2 1603 aa23.21■■□□□ 1.31
DDR1-234ENST00000424544 USP19O94966 1318 aa23.2■■□□□ 1.3
DDR1-234ENST00000424544 ZC3H6P61129 1189 aaKnown RBP23.19■■□□□ 1.3
DDR1-234ENST00000424544 CHRNA2Q15822 529 aa23.19■■□□□ 1.3
DDR1-234ENST00000424544 SSH2Q76I76 1423 aa23.18■■□□□ 1.3
DDR1-234ENST00000424544 SPATA31A1Q5TZJ5 1347 aa23.18■■□□□ 1.3
DDR1-234ENST00000424544 CPDO75976 1380 aa23.17■■□□□ 1.3
DDR1-234ENST00000424544 QRICH2Q9H0J4 1663 aa23.17■■□□□ 1.3
DDR1-234ENST00000424544 PHRF1Q9P1Y6 1649 aaKnown RBP23.17■■□□□ 1.3
DDR1-234ENST00000424544 ROCK2O75116 1388 aaKnown RBP23.16■■□□□ 1.3
DDR1-234ENST00000424544 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
DDR1-234ENST00000424544 GCP02774 474 aa23.16■■□□□ 1.3
DDR1-234ENST00000424544 NLRP13Q86W25 1043 aa23.16■■□□□ 1.3
DDR1-234ENST00000424544 DEFB132Q7Z7B7 95 aa23.15■■□□□ 1.3
DDR1-234ENST00000424544 ZRANB1Q9UGI0 708 aa23.15■■□□□ 1.3
DDR1-234ENST00000424544 USP6P35125 1406 aa23.14■■□□□ 1.29
DDR1-234ENST00000424544 CAMTA1Q9Y6Y1 1673 aa23.13■■□□□ 1.29
DDR1-234ENST00000424544 THSD7AQ9UPZ6 1657 aa23.12■■□□□ 1.29
DDR1-234ENST00000424544 NRKQ7Z2Y5 1582 aa23.11■■□□□ 1.29
DDR1-234ENST00000424544 ZNF692Q9BU19 519 aaPredicted RBP23.11■■□□□ 1.29
DDR1-234ENST00000424544 BARGINQ6ZT62 677 aa23.1■■□□□ 1.29
DDR1-234ENST00000424544 STRN4Q9NRL3 753 aa23.09■■□□□ 1.29
DDR1-234ENST00000424544 LMO7Q8WWI1 1683 aa23.09■■□□□ 1.29
DDR1-234ENST00000424544 A0A0G2JS52 829 aa23.08■■□□□ 1.29
DDR1-234ENST00000424544 NLRP6P59044 892 aa23.08■■□□□ 1.29
DDR1-234ENST00000424544 MYT1Q01538 1121 aa23.08■■□□□ 1.29
DDR1-234ENST00000424544 SF3B2Q13435 895 aaKnown RBP23.08■■□□□ 1.29
DDR1-234ENST00000424544 LARP1Q6PKG0 1096 aaKnown RBP23.08■■□□□ 1.29
DDR1-234ENST00000424544 SBNO2Q9Y2G9 1366 aa23.08■■□□□ 1.29
DDR1-234ENST00000424544 EVA1CP58658 441 aa23.07■■□□□ 1.28
DDR1-234ENST00000424544 FAM182BQ5T319 152 aa23.07■■□□□ 1.28
DDR1-234ENST00000424544 CPSF1Q10570 1443 aaKnown RBP23.07■■□□□ 1.28
DDR1-234ENST00000424544 TTC21BQ7Z4L5 1316 aa23.06■■□□□ 1.28
DDR1-234ENST00000424544 SLIT3O75094 1523 aa23.04■■□□□ 1.28
DDR1-234ENST00000424544 TCP11L2Q8N4U5 519 aa23.04■■□□□ 1.28
DDR1-234ENST00000424544 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
DDR1-234ENST00000424544 AATKQ6ZMQ8 1374 aa23.03■■□□□ 1.28
DDR1-234ENST00000424544 THRAP3Q9Y2W1 955 aaKnown RBP23.03■■□□□ 1.28
DDR1-234ENST00000424544 FAM196AQ6ZSG2 479 aa23.02■■□□□ 1.28
DDR1-234ENST00000424544 USP35Q9P2H5 1018 aa23.02■■□□□ 1.28
DDR1-234ENST00000424544 COL5A2P05997 1499 aaPredicted RBP23.01■■□□□ 1.27
DDR1-234ENST00000424544 BAG6P46379 1132 aa23.01■■□□□ 1.27
DDR1-234ENST00000424544 PIK3C2AO00443 1686 aa23■■□□□ 1.27
DDR1-234ENST00000424544 ARHGEF25Q86VW2 580 aa23■■□□□ 1.27
DDR1-234ENST00000424544 TTC21AQ8NDW8 1320 aa23■■□□□ 1.27
DDR1-234ENST00000424544 DISP2A7MBM2 1401 aa22.99■■□□□ 1.27
DDR1-234ENST00000424544 PUS7Q96PZ0 661 aaKnown RBP22.99■■□□□ 1.27
DDR1-234ENST00000424544 AXIN2Q9Y2T1 843 aa22.99■■□□□ 1.27
DDR1-234ENST00000424544 TONSLQ96HA7 1378 aa22.99■■□□□ 1.27
DDR1-234ENST00000424544 EN1Q05925 392 aaPredicted RBP22.98■■□□□ 1.27
DDR1-234ENST00000424544 COL18A1P39060 1754 aa22.98■■□□□ 1.27
DDR1-234ENST00000424544 AKAP12Q02952 1782 aa22.98■■□□□ 1.27
DDR1-234ENST00000424544 KCNH5Q8NCM2 988 aa22.96■■□□□ 1.27
DDR1-234ENST00000424544 CRB1P82279 1406 aa22.96■■□□□ 1.27
DDR1-234ENST00000424544 PDE3BQ13370 1112 aa22.95■■□□□ 1.26
DDR1-234ENST00000424544 KTN1Q86UP2 1357 aaKnown RBP22.95■■□□□ 1.26
DDR1-234ENST00000424544 CD163L1Q9NR16 1453 aa22.95■■□□□ 1.26
DDR1-234ENST00000424544 RGPD1P0DJD0 1748 aa22.94■■□□□ 1.26
DDR1-234ENST00000424544 TRIM37O94972 964 aa22.94■■□□□ 1.26
DDR1-234ENST00000424544 CAMKK2Q96RR4 588 aa22.94■■□□□ 1.26
DDR1-234ENST00000424544 TESK2Q96S53 571 aa22.94■■□□□ 1.26
DDR1-234ENST00000424544 USP31Q70CQ4 1352 aa22.93■■□□□ 1.26
DDR1-234ENST00000424544 SLC12A5Q9H2X9 1139 aa22.93■■□□□ 1.26
DDR1-234ENST00000424544 TNS1Q9HBL0 1735 aaKnown RBP22.91■■□□□ 1.26
DDR1-234ENST00000424544 WDR17Q8IZU2 1322 aa22.91■■□□□ 1.26
DDR1-234ENST00000424544 EZH2Q15910 746 aaKnown RBP22.9■■□□□ 1.26
DDR1-234ENST00000424544 NFAT5O94916 1531 aa22.89■■□□□ 1.26
DDR1-234ENST00000424544 MON2Q7Z3U7 1717 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms