RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 EIF3AQ14152 1382 aaKnown RBP17.08■□□□□ 0.32
TRBV22-1-201ENST00000424543 A0A0G2JS52 829 aa17.08■□□□□ 0.32
TRBV22-1-201ENST00000424543 MYT1Q01538 1121 aa17.08■□□□□ 0.32
TRBV22-1-201ENST00000424543 NGDNQ8NEJ9 315 aaKnown RBP17.08■□□□□ 0.32
TRBV22-1-201ENST00000424543 BTG4Q9NY30 223 aa17.08■□□□□ 0.32
TRBV22-1-201ENST00000424543 FAM98CQ17RN3 349 aaKnown RBP17.07■□□□□ 0.32
TRBV22-1-201ENST00000424543 NUTM2GQ5VZR2 741 aa17.06■□□□□ 0.32
TRBV22-1-201ENST00000424543 ZRANB1Q9UGI0 708 aa17.06■□□□□ 0.32
TRBV22-1-201ENST00000424543 FAM182BQ5T319 152 aa17.05■□□□□ 0.32
TRBV22-1-201ENST00000424543 NUDT16Q96DE0 195 aaKnown RBP17.05■□□□□ 0.32
TRBV22-1-201ENST00000424543 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
TRBV22-1-201ENST00000424543 KRT27Q7Z3Y8 459 aa17.04■□□□□ 0.32
TRBV22-1-201ENST00000424543 CCDC125Q86Z20 511 aa17.04■□□□□ 0.32
TRBV22-1-201ENST00000424543 QRICH2Q9H0J4 1663 aa17.04■□□□□ 0.32
TRBV22-1-201ENST00000424543 THSD7AQ9UPZ6 1657 aa17.04■□□□□ 0.32
TRBV22-1-201ENST00000424543 CHRNA2Q15822 529 aa17.03■□□□□ 0.32
TRBV22-1-201ENST00000424543 CDK19Q9BWU1 502 aa17.03■□□□□ 0.32
TRBV22-1-201ENST00000424543 TNS1Q9HBL0 1735 aaKnown RBP17.02■□□□□ 0.32
TRBV22-1-201ENST00000424543 ONECUT3O60422 494 aaPredicted RBP17.02■□□□□ 0.32
TRBV22-1-201ENST00000424543 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
TRBV22-1-201ENST00000424543 KIAA0232Q92628 1395 aa17.02■□□□□ 0.31
TRBV22-1-201ENST00000424543 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
TRBV22-1-201ENST00000424543 PRDM11Q9NQV5 511 aa17.01■□□□□ 0.31
TRBV22-1-201ENST00000424543 HRCP23327 699 aa17■□□□□ 0.31
TRBV22-1-201ENST00000424543 ACEP12821 1306 aa16.99■□□□□ 0.31
TRBV22-1-201ENST00000424543 SPATA31A5Q5VU36 1347 aa16.99■□□□□ 0.31
TRBV22-1-201ENST00000424543 SPATA31A7Q8IWB4 1347 aa16.99■□□□□ 0.31
TRBV22-1-201ENST00000424543 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
TRBV22-1-201ENST00000424543 SF3B2Q13435 895 aaKnown RBP16.99■□□□□ 0.31
TRBV22-1-201ENST00000424543 STRN4Q9NRL3 753 aa16.98■□□□□ 0.31
TRBV22-1-201ENST00000424543 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
TRBV22-1-201ENST00000424543 POLR3AO14802 1390 aaPredicted RBP16.97■□□□□ 0.31
TRBV22-1-201ENST00000424543 PSDA5PKW4 1024 aaPredicted RBP16.96■□□□□ 0.31
TRBV22-1-201ENST00000424543 LMO7Q8WWI1 1683 aa16.96■□□□□ 0.31
TRBV22-1-201ENST00000424543 NBPF8Q3BBV2 869 aa16.95■□□□□ 0.3
TRBV22-1-201ENST00000424543 CABP2Q9NPB3 220 aa16.95■□□□□ 0.3
TRBV22-1-201ENST00000424543 PPIP5K1Q6PFW1 1433 aa16.95■□□□□ 0.3
TRBV22-1-201ENST00000424543 CAMTA1Q9Y6Y1 1673 aa16.94■□□□□ 0.3
TRBV22-1-201ENST00000424543 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
TRBV22-1-201ENST00000424543 TRPM1Q7Z4N2 1603 aa16.94■□□□□ 0.3
TRBV22-1-201ENST00000424543 SPATA31A1Q5TZJ5 1347 aa16.94■□□□□ 0.3
TRBV22-1-201ENST00000424543 SRPK2P78362 688 aaKnown RBP16.93■□□□□ 0.3
TRBV22-1-201ENST00000424543 EN1Q05925 392 aaPredicted RBP16.93■□□□□ 0.3
TRBV22-1-201ENST00000424543 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
TRBV22-1-201ENST00000424543 SIN3AQ96ST3 1273 aa16.92■□□□□ 0.3
TRBV22-1-201ENST00000424543 SSH2Q76I76 1423 aa16.92■□□□□ 0.3
TRBV22-1-201ENST00000424543 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
TRBV22-1-201ENST00000424543 LRP5O75197 1615 aa16.92■□□□□ 0.3
TRBV22-1-201ENST00000424543 PLEKHG3A1L390 1219 aa16.91■□□□□ 0.3
TRBV22-1-201ENST00000424543 BAG6P46379 1132 aa16.91■□□□□ 0.3
TRBV22-1-201ENST00000424543 ABTB2Q8N961 1025 aa16.91■□□□□ 0.3
TRBV22-1-201ENST00000424543 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
TRBV22-1-201ENST00000424543 RGPD5Q99666 1765 aa16.89■□□□□ 0.3
TRBV22-1-201ENST00000424543 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
TRBV22-1-201ENST00000424543 LARP1Q6PKG0 1096 aaKnown RBP16.89■□□□□ 0.29
TRBV22-1-201ENST00000424543 L3MBTL2Q969R5 705 aa16.89■□□□□ 0.29
TRBV22-1-201ENST00000424543 USP19O94966 1318 aa16.89■□□□□ 0.29
TRBV22-1-201ENST00000424543 AKAP12Q02952 1782 aa16.88■□□□□ 0.29
TRBV22-1-201ENST00000424543 TRIM37O94972 964 aa16.87■□□□□ 0.29
TRBV22-1-201ENST00000424543 EVA1CP58658 441 aa16.87■□□□□ 0.29
TRBV22-1-201ENST00000424543 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
TRBV22-1-201ENST00000424543 RREB1Q92766 1687 aa16.86■□□□□ 0.29
TRBV22-1-201ENST00000424543 NEUROD1Q13562 356 aa16.86■□□□□ 0.29
TRBV22-1-201ENST00000424543 EZH2Q15910 746 aaKnown RBP16.86■□□□□ 0.29
TRBV22-1-201ENST00000424543 NUP188Q5SRE5 1749 aa16.86■□□□□ 0.29
TRBV22-1-201ENST00000424543 PARP4Q9UKK3 1724 aaKnown RBP16.86■□□□□ 0.29
TRBV22-1-201ENST00000424543 COL18A1P39060 1754 aa16.86■□□□□ 0.29
TRBV22-1-201ENST00000424543 USP6P35125 1406 aa16.86■□□□□ 0.29
TRBV22-1-201ENST00000424543 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
TRBV22-1-201ENST00000424543 CABP1Q9NZU7 370 aa16.85■□□□□ 0.29
TRBV22-1-201ENST00000424543 CPDO75976 1380 aa16.85■□□□□ 0.29
TRBV22-1-201ENST00000424543 SLIT3O75094 1523 aa16.85■□□□□ 0.29
TRBV22-1-201ENST00000424543 R3HDM1Q15032 1099 aaKnown RBP16.84■□□□□ 0.29
TRBV22-1-201ENST00000424543 DISP2A7MBM2 1401 aa16.84■□□□□ 0.29
TRBV22-1-201ENST00000424543 LRRC37A3O60309 1634 aa16.84■□□□□ 0.29
TRBV22-1-201ENST00000424543 GCP02774 474 aa16.83■□□□□ 0.28
TRBV22-1-201ENST00000424543 SBF2Q86WG5 1849 aa16.83■□□□□ 0.28
TRBV22-1-201ENST00000424543 NLRP13Q86W25 1043 aa16.82■□□□□ 0.28
TRBV22-1-201ENST00000424543 ROCK2O75116 1388 aaKnown RBP16.81■□□□□ 0.28
TRBV22-1-201ENST00000424543 NLRP6P59044 892 aa16.81■□□□□ 0.28
TRBV22-1-201ENST00000424543 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
TRBV22-1-201ENST00000424543 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
TRBV22-1-201ENST00000424543 PEAK1Q9H792 1746 aa16.81■□□□□ 0.28
TRBV22-1-201ENST00000424543 SOX12O15370 315 aa16.8■□□□□ 0.28
TRBV22-1-201ENST00000424543 APBA3O96018 575 aa16.8■□□□□ 0.28
TRBV22-1-201ENST00000424543 FAM196AQ6ZSG2 479 aa16.8■□□□□ 0.28
TRBV22-1-201ENST00000424543 CAMKK2Q96RR4 588 aa16.8■□□□□ 0.28
TRBV22-1-201ENST00000424543 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
TRBV22-1-201ENST00000424543 PDE3BQ13370 1112 aa16.79■□□□□ 0.28
TRBV22-1-201ENST00000424543 EVC2Q86UK5 1308 aa16.78■□□□□ 0.28
TRBV22-1-201ENST00000424543 CRB1P82279 1406 aa16.78■□□□□ 0.28
TRBV22-1-201ENST00000424543 AXIN2Q9Y2T1 843 aa16.76■□□□□ 0.27
TRBV22-1-201ENST00000424543 CPSF1Q10570 1443 aaKnown RBP16.75■□□□□ 0.27
TRBV22-1-201ENST00000424543 AATKQ6ZMQ8 1374 aa16.75■□□□□ 0.27
TRBV22-1-201ENST00000424543 NFAT5O94916 1531 aa16.75■□□□□ 0.27
TRBV22-1-201ENST00000424543 LTN1O94822 1766 aa16.74■□□□□ 0.27
TRBV22-1-201ENST00000424543 TTC21BQ7Z4L5 1316 aa16.74■□□□□ 0.27
TRBV22-1-201ENST00000424543 PTF1AQ7RTS3 328 aa16.74■□□□□ 0.27
TRBV22-1-201ENST00000424543 BRD4O60885 1362 aaPredicted RBP16.74■□□□□ 0.27
TRBV22-1-201ENST00000424543 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms