RNA–Protein interactions for RNA: ENST00000424439.2

NHLRC4-201, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NHLRC4, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-201ENST00000424439 XRCC6P12956 609 aaKnown RBP eCLIP29.38■■■□□ 2.29
NHLRC4-201ENST00000424439 CAMSAP1Q5T5Y3 1602 aa29.38■■■□□ 2.29
NHLRC4-201ENST00000424439 NCOA3Q9Y6Q9 1424 aa29.37■■■□□ 2.29
NHLRC4-201ENST00000424439 ABCC11Q96J66 1382 aa29.37■■■□□ 2.29
NHLRC4-201ENST00000424439 ISY1Q9ULR0 285 aaKnown RBP29.37■■■□□ 2.29
NHLRC4-201ENST00000424439 KDM4FA0A1W2PPD8 638 aa29.36■■■□□ 2.29
NHLRC4-201ENST00000424439 EVC2Q86UK5 1308 aa29.36■■■□□ 2.29
NHLRC4-201ENST00000424439 EIF5BO60841 1220 aaKnown RBP29.35■■■□□ 2.29
NHLRC4-201ENST00000424439 U2AF1L5P0DN76 240 aaPredicted RBP29.35■■■□□ 2.29
NHLRC4-201ENST00000424439 U2AF1Q01081 240 aaKnown RBP eCLIP29.35■■■□□ 2.29
NHLRC4-201ENST00000424439 TULP4Q9NRJ4 1543 aa29.35■■■□□ 2.29
NHLRC4-201ENST00000424439 ARHGEF28Q8N1W1 1705 aaKnown RBP29.35■■■□□ 2.29
NHLRC4-201ENST00000424439 YEATS2Q9ULM3 1422 aa29.34■■■□□ 2.29
NHLRC4-201ENST00000424439 DDX11L8A8MPP1 907 aa29.33■■■□□ 2.29
NHLRC4-201ENST00000424439 TRIM27P14373 513 aa29.33■■■□□ 2.29
NHLRC4-201ENST00000424439 ATF7IPQ6VMQ6 1270 aa29.33■■■□□ 2.29
NHLRC4-201ENST00000424439 SMC4Q9NTJ3 1288 aa29.33■■■□□ 2.29
NHLRC4-201ENST00000424439 TRAK2O60296 914 aa29.32■■■□□ 2.28
NHLRC4-201ENST00000424439 SNX21Q969T3 373 aa29.32■■■□□ 2.28
NHLRC4-201ENST00000424439 PLEKHF1Q96S99 279 aa29.32■■■□□ 2.28
NHLRC4-201ENST00000424439 ZNF692Q9BU19 519 aaPredicted RBP29.32■■■□□ 2.28
NHLRC4-201ENST00000424439 RBM25P49756 843 aaKnown RBP29.31■■■□□ 2.28
NHLRC4-201ENST00000424439 MRE11P49959 708 aa29.31■■■□□ 2.28
NHLRC4-201ENST00000424439 HSCBQ8IWL3 235 aa29.31■■■□□ 2.28
NHLRC4-201ENST00000424439 COL3A1P02461 1466 aaPredicted RBP29.31■■■□□ 2.28
NHLRC4-201ENST00000424439 DDIT3P35638 169 aa29.3■■■□□ 2.28
NHLRC4-201ENST00000424439 MFAP1P55081 439 aaKnown RBP29.3■■■□□ 2.28
NHLRC4-201ENST00000424439 EXOSC9Q06265 439 aaKnown RBP29.29■■■□□ 2.28
NHLRC4-201ENST00000424439 ARHGAP31Q2M1Z3 1444 aa29.29■■■□□ 2.28
NHLRC4-201ENST00000424439 TMPOP42166 694 aaKnown RBP29.29■■■□□ 2.28
NHLRC4-201ENST00000424439 SSH1Q8WYL5 1049 aa29.28■■■□□ 2.28
NHLRC4-201ENST00000424439 MED14O60244 1454 aa29.28■■■□□ 2.28
NHLRC4-201ENST00000424439 SIGLEC1Q9BZZ2 1709 aa29.28■■■□□ 2.28
NHLRC4-201ENST00000424439 ANKRD26Q9UPS8 1709 aa29.28■■■□□ 2.28
NHLRC4-201ENST00000424439 CFAP65Q6ZU64 1925 aaKnown RBP29.27■■■□□ 2.28
NHLRC4-201ENST00000424439 ZBTB40Q9NUA8 1239 aa29.27■■■□□ 2.28
NHLRC4-201ENST00000424439 CIZ1Q9ULV3 898 aaPredicted RBP29.27■■■□□ 2.28
NHLRC4-201ENST00000424439 TRIM35Q9UPQ4 493 aa29.27■■■□□ 2.28
NHLRC4-201ENST00000424439 CLCN1P35523 988 aa29.27■■■□□ 2.28
NHLRC4-201ENST00000424439 PIK3C2BO00750 1634 aa29.25■■■□□ 2.27
NHLRC4-201ENST00000424439 TSR2Q969E8 191 aaKnown RBP29.25■■■□□ 2.27
NHLRC4-201ENST00000424439 KIF16BQ96L93 1317 aa29.25■■■□□ 2.27
NHLRC4-201ENST00000424439 IPO8O15397 1037 aaKnown RBP29.25■■■□□ 2.27
NHLRC4-201ENST00000424439 ITPRIPQ8IWB1 547 aa29.25■■■□□ 2.27
NHLRC4-201ENST00000424439 CHGAP10645 457 aaKnown RBP29.24■■■□□ 2.27
NHLRC4-201ENST00000424439 TMEM132EQ6IEE7 984 aa29.24■■■□□ 2.27
NHLRC4-201ENST00000424439 NUCB1Q02818 461 aa29.24■■■□□ 2.27
NHLRC4-201ENST00000424439 ALDH1L2Q3SY69 923 aa29.22■■■□□ 2.27
NHLRC4-201ENST00000424439 SPRYD3Q8NCJ5 442 aa29.22■■■□□ 2.27
NHLRC4-201ENST00000424439 NOB1Q9ULX3 412 aaKnown RBP29.22■■■□□ 2.27
NHLRC4-201ENST00000424439 PTMSP20962 102 aa29.21■■■□□ 2.27
NHLRC4-201ENST00000424439 BRPF1P55201 1214 aaPredicted RBP29.21■■■□□ 2.27
NHLRC4-201ENST00000424439 PNNQ9H307 717 aaKnown RBP29.21■■■□□ 2.27
NHLRC4-201ENST00000424439 REREQ9P2R6 1566 aa29.19■■■□□ 2.26
NHLRC4-201ENST00000424439 TMEM57Q8N5G2 664 aa29.19■■■□□ 2.26
NHLRC4-201ENST00000424439 NEXMIFQ5QGS0 1516 aa29.19■■■□□ 2.26
NHLRC4-201ENST00000424439 ZNF428Q96B54 188 aa29.19■■■□□ 2.26
NHLRC4-201ENST00000424439 ARHGEF40Q8TER5 1519 aa29.17■■■□□ 2.26
NHLRC4-201ENST00000424439 VGFO15240 615 aaPredicted RBP29.17■■■□□ 2.26
NHLRC4-201ENST00000424439 PANK2Q9BZ23 570 aa29.17■■■□□ 2.26
NHLRC4-201ENST00000424439 GZF1Q9H116 711 aaPredicted RBP29.17■■■□□ 2.26
NHLRC4-201ENST00000424439 GRPEL1Q9HAV7 217 aa29.16■■■□□ 2.26
NHLRC4-201ENST00000424439 BMP2KLQ5H9B9 411 aa29.16■■■□□ 2.26
NHLRC4-201ENST00000424439 A0A1W2PP64 1363 aa29.16■■■□□ 2.26
NHLRC4-201ENST00000424439 ZFYVE9O95405 1425 aa29.15■■■□□ 2.26
NHLRC4-201ENST00000424439 CDC42BPGQ6DT37 1551 aa29.15■■■□□ 2.26
NHLRC4-201ENST00000424439 CHMP4BQ9H444 224 aaKnown RBP29.15■■■□□ 2.26
NHLRC4-201ENST00000424439 SKOR2Q2VWA4 1001 aaPredicted RBP29.14■■■□□ 2.26
NHLRC4-201ENST00000424439 PPIP5K1Q6PFW1 1433 aa29.14■■■□□ 2.26
NHLRC4-201ENST00000424439 PNPLA6Q8IY17 1366 aa29.14■■■□□ 2.26
NHLRC4-201ENST00000424439 CHD1LQ86WJ1 897 aa29.14■■■□□ 2.25
NHLRC4-201ENST00000424439 CLTCQ00610 1675 aaKnown RBP29.13■■■□□ 2.25
NHLRC4-201ENST00000424439 U2SURPO15042 1029 aaKnown RBP29.13■■■□□ 2.25
NHLRC4-201ENST00000424439 GBP4Q96PP9 640 aa29.13■■■□□ 2.25
NHLRC4-201ENST00000424439 AGLP35573 1532 aa29.12■■■□□ 2.25
NHLRC4-201ENST00000424439 RAB3GAP1Q15042 981 aa29.11■■■□□ 2.25
NHLRC4-201ENST00000424439 CABP2Q9NPB3 220 aa29.11■■■□□ 2.25
NHLRC4-201ENST00000424439 ATAD2Q6PL18 1390 aa29.11■■■□□ 2.25
NHLRC4-201ENST00000424439 PREX1Q8TCU6 1659 aa29.1■■■□□ 2.25
NHLRC4-201ENST00000424439 RIPK4P57078 832 aa29.1■■■□□ 2.25
NHLRC4-201ENST00000424439 GCC1Q96CN9 775 aa29.1■■■□□ 2.25
NHLRC4-201ENST00000424439 TNPO1Q92973 898 aaKnown RBP29.09■■■□□ 2.25
NHLRC4-201ENST00000424439 PIK3R4Q99570 1358 aa29.09■■■□□ 2.25
NHLRC4-201ENST00000424439 SLC52A1Q9NWF4 448 aa29.08■■■□□ 2.25
NHLRC4-201ENST00000424439 ARHGAP45Q92619 1136 aa29.07■■■□□ 2.24
NHLRC4-201ENST00000424439 TERF2IPQ9NYB0 399 aa29.06■■■□□ 2.24
NHLRC4-201ENST00000424439 HSP90AB1P08238 724 aaKnown RBP29.06■■■□□ 2.24
NHLRC4-201ENST00000424439 DIAPH1O60610 1272 aaKnown RBP29.05■■■□□ 2.24
NHLRC4-201ENST00000424439 KIF2CQ99661 725 aa29.05■■■□□ 2.24
NHLRC4-201ENST00000424439 LNPKQ9C0E8 428 aa29.05■■■□□ 2.24
NHLRC4-201ENST00000424439 FYB1O15117 783 aa29.05■■■□□ 2.24
NHLRC4-201ENST00000424439 PPP6R1Q9UPN7 881 aa29.05■■■□□ 2.24
NHLRC4-201ENST00000424439 CD163L1Q9NR16 1453 aa29.04■■■□□ 2.24
NHLRC4-201ENST00000424439 FCHSD2O94868 740 aa29.04■■■□□ 2.24
NHLRC4-201ENST00000424439 ARXQ96QS3 562 aa29.04■■■□□ 2.24
NHLRC4-201ENST00000424439 GGNBP2Q9H3C7 697 aa29.04■■■□□ 2.24
NHLRC4-201ENST00000424439 PTCH1Q13635 1447 aa29.03■■■□□ 2.24
NHLRC4-201ENST00000424439 CLEC17AQ6ZS10 378 aa29.03■■■□□ 2.24
NHLRC4-201ENST00000424439 IDI1Q13907 227 aa29.02■■■□□ 2.24
NHLRC4-201ENST00000424439 KIF20BQ96Q89 1820 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms