RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 ARHGEF10O15013 1369 aa15.4■□□□□ 0.06
TOP3B-203ENST00000424393 QTRT2Q9H974 415 aaKnown RBP15.4■□□□□ 0.06
TOP3B-203ENST00000424393 LMOD2Q6P5Q4 547 aa15.39■□□□□ 0.05
TOP3B-203ENST00000424393 CDK12Q9NYV4 1490 aaPredicted RBP15.39■□□□□ 0.05
TOP3B-203ENST00000424393 USP6P35125 1406 aa15.38■□□□□ 0.05
TOP3B-203ENST00000424393 ADAMTS2O95450 1211 aa15.38■□□□□ 0.05
TOP3B-203ENST00000424393 RBM6P78332 1123 aaKnown RBP15.38■□□□□ 0.05
TOP3B-203ENST00000424393 NRKQ7Z2Y5 1582 aa15.37■□□□□ 0.05
TOP3B-203ENST00000424393 PAK3O75914 559 aaPredicted RBP15.37■□□□□ 0.05
TOP3B-203ENST00000424393 CABLES1Q8TDN4 633 aa15.37■□□□□ 0.05
TOP3B-203ENST00000424393 NGLY1Q96IV0 654 aa15.37■□□□□ 0.05
TOP3B-203ENST00000424393 PUS7Q96PZ0 661 aaKnown RBP15.37■□□□□ 0.05
TOP3B-203ENST00000424393 MON2Q7Z3U7 1717 aa15.37■□□□□ 0.05
TOP3B-203ENST00000424393 CPSF1Q10570 1443 aaKnown RBP15.36■□□□□ 0.05
TOP3B-203ENST00000424393 SSH2Q76I76 1423 aa15.36■□□□□ 0.05
TOP3B-203ENST00000424393 CD163L1Q9NR16 1453 aa15.36■□□□□ 0.05
TOP3B-203ENST00000424393 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
TOP3B-203ENST00000424393 PHRF1Q9P1Y6 1649 aaKnown RBP15.35■□□□□ 0.05
TOP3B-203ENST00000424393 SLC24A1O60721 1099 aa15.35■□□□□ 0.05
TOP3B-203ENST00000424393 BRD4O60885 1362 aaPredicted RBP15.35■□□□□ 0.05
TOP3B-203ENST00000424393 TMF1P82094 1093 aa15.34■□□□□ 0.05
TOP3B-203ENST00000424393 PIK3C2AO00443 1686 aa15.34■□□□□ 0.05
TOP3B-203ENST00000424393 HSPA5P11021 654 aaKnown RBP15.33■□□□□ 0.04
TOP3B-203ENST00000424393 TMC1Q8TDI8 760 aa15.33■□□□□ 0.04
TOP3B-203ENST00000424393 SLC12A5Q9H2X9 1139 aa15.33■□□□□ 0.04
TOP3B-203ENST00000424393 RGS12O14924 1447 aa15.33■□□□□ 0.04
TOP3B-203ENST00000424393 EIF4G2P78344 907 aaKnown RBP eCLIP15.32■□□□□ 0.04
TOP3B-203ENST00000424393 NUTM2GQ5VZR2 741 aa15.32■□□□□ 0.04
TOP3B-203ENST00000424393 ZNF692Q9BU19 519 aaPredicted RBP15.32■□□□□ 0.04
TOP3B-203ENST00000424393 KTN1Q86UP2 1357 aaKnown RBP15.32■□□□□ 0.04
TOP3B-203ENST00000424393 MYOM1P52179 1685 aa15.32■□□□□ 0.04
TOP3B-203ENST00000424393 PLCH1Q4KWH8 1693 aa15.32■□□□□ 0.04
TOP3B-203ENST00000424393 HAP1P54257 671 aaPredicted RBP15.31■□□□□ 0.04
TOP3B-203ENST00000424393 ABTB2Q8N961 1025 aa15.31■□□□□ 0.04
TOP3B-203ENST00000424393 ZRANB1Q9UGI0 708 aa15.31■□□□□ 0.04
TOP3B-203ENST00000424393 A0A1W2PP64 1363 aa15.3■□□□□ 0.04
TOP3B-203ENST00000424393 SLIT2O94813 1529 aa15.3■□□□□ 0.04
TOP3B-203ENST00000424393 TTC21BQ7Z4L5 1316 aa15.3■□□□□ 0.04
TOP3B-203ENST00000424393 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
TOP3B-203ENST00000424393 NINLQ9Y2I6 1382 aa15.3■□□□□ 0.04
TOP3B-203ENST00000424393 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.29■□□□□ 0.04
TOP3B-203ENST00000424393 BCL9LQ86UU0 1499 aa15.29■□□□□ 0.04
TOP3B-203ENST00000424393 USP19O94966 1318 aa15.29■□□□□ 0.04
TOP3B-203ENST00000424393 USP21Q9UK80 565 aa15.29■□□□□ 0.04
TOP3B-203ENST00000424393 SLIT3O75094 1523 aa15.28■□□□□ 0.04
TOP3B-203ENST00000424393 HDGFL2Q7Z4V5 671 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-203ENST00000424393 COL14A1Q05707 1796 aaKnown RBP15.28■□□□□ 0.04
TOP3B-203ENST00000424393 NWD2Q9ULI1 1742 aa15.28■□□□□ 0.04
TOP3B-203ENST00000424393 TTC21AQ8NDW8 1320 aa15.27■□□□□ 0.04
TOP3B-203ENST00000424393 CDCA8Q53HL2 280 aa15.27■□□□□ 0.04
TOP3B-203ENST00000424393 NLRP13Q86W25 1043 aa15.27■□□□□ 0.04
TOP3B-203ENST00000424393 TERF2IPQ9NYB0 399 aa15.27■□□□□ 0.04
TOP3B-203ENST00000424393 TRPC5Q9UL62 973 aaPredicted RBP15.27■□□□□ 0.04
TOP3B-203ENST00000424393 USP54Q70EL1 1684 aa15.27■□□□□ 0.03
TOP3B-203ENST00000424393 EDC4Q6P2E9 1401 aaKnown RBP15.26■□□□□ 0.03
TOP3B-203ENST00000424393 NRAPQ86VF7 1730 aa15.26■□□□□ 0.03
TOP3B-203ENST00000424393 FAM83GA6ND36 823 aa15.26■□□□□ 0.03
TOP3B-203ENST00000424393 ATRNO75882 1429 aa15.26■□□□□ 0.03
TOP3B-203ENST00000424393 ANKRD36BQ8N2N9 1353 aa15.25■□□□□ 0.03
TOP3B-203ENST00000424393 NLRP6P59044 892 aa15.25■□□□□ 0.03
TOP3B-203ENST00000424393 KIAA0232Q92628 1395 aa15.24■□□□□ 0.03
TOP3B-203ENST00000424393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
TOP3B-203ENST00000424393 GCP02774 474 aa15.23■□□□□ 0.03
TOP3B-203ENST00000424393 ZC3H6P61129 1189 aaKnown RBP15.23■□□□□ 0.03
TOP3B-203ENST00000424393 NME9Q86XW9 330 aa15.23■□□□□ 0.03
TOP3B-203ENST00000424393 UNC5CLQ8IV45 518 aa15.23■□□□□ 0.03
TOP3B-203ENST00000424393 SRCAPQ6ZRS2 3230 aa15.23■□□□□ 0.03
TOP3B-203ENST00000424393 USP31Q70CQ4 1352 aa15.23■□□□□ 0.03
TOP3B-203ENST00000424393 LMO7Q8WWI1 1683 aa15.22■□□□□ 0.03
TOP3B-203ENST00000424393 C11orf95C9JLR9 678 aaPredicted RBP15.22■□□□□ 0.03
TOP3B-203ENST00000424393 PRDM11Q9NQV5 511 aa15.22■□□□□ 0.03
TOP3B-203ENST00000424393 CPDO75976 1380 aa15.22■□□□□ 0.03
TOP3B-203ENST00000424393 GLI3P10071 1580 aa15.21■□□□□ 0.03
TOP3B-203ENST00000424393 CHRNA2Q15822 529 aa15.21■□□□□ 0.03
TOP3B-203ENST00000424393 NFAT5O94916 1531 aa15.21■□□□□ 0.03
TOP3B-203ENST00000424393 OVOS2A0A0J9YW53 1432 aa15.2■□□□□ 0.02
TOP3B-203ENST00000424393 OVOS2Q6IE36 1432 aa15.2■□□□□ 0.02
TOP3B-203ENST00000424393 POLR3GLQ9BT43 218 aa15.2■□□□□ 0.02
TOP3B-203ENST00000424393 BTG4Q9NY30 223 aa15.2■□□□□ 0.02
TOP3B-203ENST00000424393 COL18A1P39060 1754 aa15.19■□□□□ 0.02
TOP3B-203ENST00000424393 KIF20BQ96Q89 1820 aa15.19■□□□□ 0.02
TOP3B-203ENST00000424393 CAMTA1Q9Y6Y1 1673 aa15.19■□□□□ 0.02
TOP3B-203ENST00000424393 CCDC125Q86Z20 511 aa15.18■□□□□ 0.02
TOP3B-203ENST00000424393 CARD14Q9BXL6 1004 aa15.18■□□□□ 0.02
TOP3B-203ENST00000424393 VPS72Q15906 364 aa15.17■□□□□ 0.02
TOP3B-203ENST00000424393 KCNH5Q8NCM2 988 aa15.17■□□□□ 0.02
TOP3B-203ENST00000424393 GJD4Q96KN9 370 aaPredicted RBP15.17■□□□□ 0.02
TOP3B-203ENST00000424393 NSD3Q9BZ95 1437 aa15.17■□□□□ 0.02
TOP3B-203ENST00000424393 SOX12O15370 315 aa15.16■□□□□ 0.02
TOP3B-203ENST00000424393 SF3B2Q13435 895 aaKnown RBP15.16■□□□□ 0.02
TOP3B-203ENST00000424393 LTN1O94822 1766 aa15.16■□□□□ 0.02
TOP3B-203ENST00000424393 RGPD5Q99666 1765 aa15.16■□□□□ 0.02
TOP3B-203ENST00000424393 KIF7Q2M1P5 1343 aa15.16■□□□□ 0.02
TOP3B-203ENST00000424393 ZBTB7CA1YPR0 619 aa15.15■□□□□ 0.02
TOP3B-203ENST00000424393 ARHGEF25Q86VW2 580 aa15.15■□□□□ 0.02
TOP3B-203ENST00000424393 AATKQ6ZMQ8 1374 aa15.14■□□□□ 0.01
TOP3B-203ENST00000424393 FYB1O15117 783 aa15.14■□□□□ 0.01
TOP3B-203ENST00000424393 COL5A2P05997 1499 aaPredicted RBP15.14■□□□□ 0.01
TOP3B-203ENST00000424393 STRN4Q9NRL3 753 aa15.13■□□□□ 0.01
TOP3B-203ENST00000424393 CCDC9Q9Y3X0 531 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms