RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 RREB1Q92766 1687 aa9.74□□□□□ -0.85
SDCBP-203ENST00000424270 KIF1AQ12756 1690 aa9.74□□□□□ -0.85
SDCBP-203ENST00000424270 EVA1CP58658 441 aa9.73□□□□□ -0.85
SDCBP-203ENST00000424270 WAPLQ7Z5K2 1190 aa9.73□□□□□ -0.85
SDCBP-203ENST00000424270 MYOM1P52179 1685 aa9.73□□□□□ -0.85
SDCBP-203ENST00000424270 VPS8Q8N3P4 1428 aa9.73□□□□□ -0.85
SDCBP-203ENST00000424270 NEXMIFQ5QGS0 1516 aa9.72□□□□□ -0.85
SDCBP-203ENST00000424270 DLC1Q96QB1 1528 aa9.72□□□□□ -0.85
SDCBP-203ENST00000424270 STK32BQ9NY57 414 aa9.72□□□□□ -0.85
SDCBP-203ENST00000424270 THSD7AQ9UPZ6 1657 aa9.71□□□□□ -0.85
SDCBP-203ENST00000424270 NRAPQ86VF7 1730 aa9.71□□□□□ -0.85
SDCBP-203ENST00000424270 COL14A1Q05707 1796 aaKnown RBP9.71□□□□□ -0.85
SDCBP-203ENST00000424270 PDGFDQ9GZP0 370 aaPredicted RBP9.71□□□□□ -0.86
SDCBP-203ENST00000424270 CHD4Q14839 1912 aa9.71□□□□□ -0.86
SDCBP-203ENST00000424270 SPATA31A1Q5TZJ5 1347 aa9.71□□□□□ -0.86
SDCBP-203ENST00000424270 SBNO1A3KN83 1393 aa9.71□□□□□ -0.86
SDCBP-203ENST00000424270 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
SDCBP-203ENST00000424270 HSPA6P17066 643 aa9.7□□□□□ -0.86
SDCBP-203ENST00000424270 PTGER2P43116 358 aa9.7□□□□□ -0.86
SDCBP-203ENST00000424270 PMFBP1Q8TBY8 1022 aa9.7□□□□□ -0.86
SDCBP-203ENST00000424270 ANO8Q9HCE9 1232 aaPredicted RBP9.7□□□□□ -0.86
SDCBP-203ENST00000424270 RRBP1Q9P2E9 1410 aaKnown RBP9.7□□□□□ -0.86
SDCBP-203ENST00000424270 ARXQ96QS3 562 aa9.69□□□□□ -0.86
SDCBP-203ENST00000424270 ABCA3Q99758 1704 aa9.69□□□□□ -0.86
SDCBP-203ENST00000424270 GPBP1L1Q9HC44 474 aaPredicted RBP9.69□□□□□ -0.86
SDCBP-203ENST00000424270 CACNB1Q02641 598 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-203ENST00000424270 CHRNA2Q15822 529 aa9.68□□□□□ -0.86
SDCBP-203ENST00000424270 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
SDCBP-203ENST00000424270 MTFR1LQ9H019 292 aa9.68□□□□□ -0.86
SDCBP-203ENST00000424270 RNF39Q9H2S5 420 aa9.68□□□□□ -0.86
SDCBP-203ENST00000424270 TECPR2O15040 1411 aa9.67□□□□□ -0.86
SDCBP-203ENST00000424270 GPRASP1Q5JY77 1395 aa9.67□□□□□ -0.86
SDCBP-203ENST00000424270 PRAG1Q86YV5 1406 aa9.66□□□□□ -0.86
SDCBP-203ENST00000424270 C11orf95C9JLR9 678 aaPredicted RBP9.66□□□□□ -0.86
SDCBP-203ENST00000424270 ITGAEP38570 1179 aa9.66□□□□□ -0.86
SDCBP-203ENST00000424270 CEP350Q5VT06 3117 aa9.66□□□□□ -0.86
SDCBP-203ENST00000424270 FMN2Q9NZ56 1722 aa9.65□□□□□ -0.86
SDCBP-203ENST00000424270 PLEKHH1Q9ULM0 1364 aa9.65□□□□□ -0.86
SDCBP-203ENST00000424270 SAFB2Q14151 953 aaKnown RBP eCLIP9.65□□□□□ -0.86
SDCBP-203ENST00000424270 TNS4Q8IZW8 715 aa9.65□□□□□ -0.86
SDCBP-203ENST00000424270 CASZ1Q86V15 1759 aa9.65□□□□□ -0.87
SDCBP-203ENST00000424270 CLTCL1P53675 1640 aa9.64□□□□□ -0.87
SDCBP-203ENST00000424270 RPGRIP1LQ68CZ1 1315 aa9.64□□□□□ -0.87
SDCBP-203ENST00000424270 PLSCR1O15162 318 aa9.64□□□□□ -0.87
SDCBP-203ENST00000424270 KCNA4P22459 653 aa9.64□□□□□ -0.87
SDCBP-203ENST00000424270 ZC3H6P61129 1189 aaKnown RBP9.64□□□□□ -0.87
SDCBP-203ENST00000424270 TMEM132EQ6IEE7 984 aa9.64□□□□□ -0.87
SDCBP-203ENST00000424270 BARGINQ6ZT62 677 aa9.64□□□□□ -0.87
SDCBP-203ENST00000424270 TCP11L2Q8N4U5 519 aa9.64□□□□□ -0.87
SDCBP-203ENST00000424270 NRXN1Q9ULB1 1477 aa9.64□□□□□ -0.87
SDCBP-203ENST00000424270 KIAA0232Q92628 1395 aa9.63□□□□□ -0.87
SDCBP-203ENST00000424270 KIF1BO60333 1816 aa9.63□□□□□ -0.87
SDCBP-203ENST00000424270 POLD1P28340 1107 aa9.63□□□□□ -0.87
SDCBP-203ENST00000424270 SLC15A2Q16348 729 aa9.63□□□□□ -0.87
SDCBP-203ENST00000424270 OVOS2A0A0G2JMS6 1433 aa9.63□□□□□ -0.87
SDCBP-203ENST00000424270 OVOS2A0A0J9YW53 1432 aa9.63□□□□□ -0.87
SDCBP-203ENST00000424270 OVOS2Q6IE36 1432 aa9.63□□□□□ -0.87
SDCBP-203ENST00000424270 ATP10DQ9P241 1426 aa9.63□□□□□ -0.87
SDCBP-203ENST00000424270 GRIN3BO60391 1043 aa9.62□□□□□ -0.87
SDCBP-203ENST00000424270 NGDNQ8NEJ9 315 aaKnown RBP9.62□□□□□ -0.87
SDCBP-203ENST00000424270 ZBTB7CA1YPR0 619 aa9.61□□□□□ -0.87
SDCBP-203ENST00000424270 PRELPP51888 382 aa9.61□□□□□ -0.87
SDCBP-203ENST00000424270 COL13A1Q5TAT6 717 aaPredicted RBP9.61□□□□□ -0.87
SDCBP-203ENST00000424270 LARP1Q6PKG0 1096 aaKnown RBP9.61□□□□□ -0.87
SDCBP-203ENST00000424270 SHANK3Q9BYB0 1731 aa9.61□□□□□ -0.87
SDCBP-203ENST00000424270 UTRNP46939 3433 aa9.6□□□□□ -0.87
SDCBP-203ENST00000424270 SSH2Q76I76 1423 aa9.6□□□□□ -0.87
SDCBP-203ENST00000424270 APLP1P51693 650 aa9.6□□□□□ -0.87
SDCBP-203ENST00000424270 TXNRD1Q16881 649 aa9.6□□□□□ -0.87
SDCBP-203ENST00000424270 NUTM2GQ5VZR2 741 aa9.6□□□□□ -0.87
SDCBP-203ENST00000424270 POGKQ9P215 609 aa9.6□□□□□ -0.87
SDCBP-203ENST00000424270 C1QBPQ07021 282 aaKnown RBP9.59□□□□□ -0.87
SDCBP-203ENST00000424270 DDB1Q16531 1140 aa9.59□□□□□ -0.87
SDCBP-203ENST00000424270 THRAP3Q9Y2W1 955 aaKnown RBP9.59□□□□□ -0.87
SDCBP-203ENST00000424270 ABCC11Q96J66 1382 aa9.59□□□□□ -0.87
SDCBP-203ENST00000424270 MAP3K5Q99683 1374 aa9.59□□□□□ -0.87
SDCBP-203ENST00000424270 IFT172Q9UG01 1749 aa9.59□□□□□ -0.87
SDCBP-203ENST00000424270 ACIN1Q9UKV3 1341 aaKnown RBP9.58□□□□□ -0.88
SDCBP-203ENST00000424270 RGPD8O14715 1765 aaPredicted RBP9.58□□□□□ -0.88
SDCBP-203ENST00000424270 RGL3Q3MIN7 710 aa9.58□□□□□ -0.88
SDCBP-203ENST00000424270 SGIP1Q9BQI5 828 aa9.58□□□□□ -0.88
SDCBP-203ENST00000424270 PRAM1Q96QH2 718 aa9.57□□□□□ -0.88
SDCBP-203ENST00000424270 ROCK1Q13464 1354 aa9.57□□□□□ -0.88
SDCBP-203ENST00000424270 ADGRF5Q8IZF2 1346 aa9.56□□□□□ -0.88
SDCBP-203ENST00000424270 YTHDC2Q9H6S0 1430 aaKnown RBP9.56□□□□□ -0.88
SDCBP-203ENST00000424270 RGPD3A6NKT7 1758 aaPredicted RBP9.56□□□□□ -0.88
SDCBP-203ENST00000424270 RGPD4Q7Z3J3 1758 aa9.56□□□□□ -0.88
SDCBP-203ENST00000424270 DHX57Q6P158 1386 aaKnown RBP9.56□□□□□ -0.88
SDCBP-203ENST00000424270 SLC34A2O95436 690 aa9.56□□□□□ -0.88
SDCBP-203ENST00000424270 PTF1AQ7RTS3 328 aa9.56□□□□□ -0.88
SDCBP-203ENST00000424270 PROM2Q8N271 834 aa9.56□□□□□ -0.88
SDCBP-203ENST00000424270 NLGN2Q8NFZ4 835 aa9.56□□□□□ -0.88
SDCBP-203ENST00000424270 HIRIP3Q9BW71 556 aaPredicted RBP9.56□□□□□ -0.88
SDCBP-203ENST00000424270 ANKARQ7Z5J8 1434 aa9.55□□□□□ -0.88
SDCBP-203ENST00000424270 EIF3AQ14152 1382 aaKnown RBP9.54□□□□□ -0.88
SDCBP-203ENST00000424270 YBX3P16989 372 aaKnown RBP eCLIP9.54□□□□□ -0.88
SDCBP-203ENST00000424270 PPLO60437 1756 aa9.54□□□□□ -0.88
SDCBP-203ENST00000424270 ALS2Q96Q42 1657 aa9.54□□□□□ -0.88
SDCBP-203ENST00000424270 KNDC1Q76NI1 1749 aa9.53□□□□□ -0.88
SDCBP-203ENST00000424270 TRPM3Q9HCF6 1732 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms