RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 KTN1Q86UP2 1357 aaKnown RBP19.22■□□□□ 0.67
ACTN4-203ENST00000424234 EDC4Q6P2E9 1401 aaKnown RBP19.22■□□□□ 0.67
ACTN4-203ENST00000424234 TERF2IPQ9NYB0 399 aa19.22■□□□□ 0.67
ACTN4-203ENST00000424234 SSH2Q76I76 1423 aa19.22■□□□□ 0.67
ACTN4-203ENST00000424234 UBAP1LF5GYI3 381 aa19.21■□□□□ 0.67
ACTN4-203ENST00000424234 PANK3Q9H999 370 aa19.21■□□□□ 0.67
ACTN4-203ENST00000424234 HDGFL2Q7Z4V5 671 aaPredicted RBP19.2■□□□□ 0.66
ACTN4-203ENST00000424234 NGDNQ8NEJ9 315 aaKnown RBP19.2■□□□□ 0.66
ACTN4-203ENST00000424234 CARD14Q9BXL6 1004 aa19.19■□□□□ 0.66
ACTN4-203ENST00000424234 PHRF1Q9P1Y6 1649 aaKnown RBP19.18■□□□□ 0.66
ACTN4-203ENST00000424234 NPHP3Q7Z494 1330 aa19.18■□□□□ 0.66
ACTN4-203ENST00000424234 FOXO3O43524 673 aa19.18■□□□□ 0.66
ACTN4-203ENST00000424234 DDX17Q92841 729 aaKnown RBP19.17■□□□□ 0.66
ACTN4-203ENST00000424234 BRD4O60885 1362 aaPredicted RBP19.16■□□□□ 0.66
ACTN4-203ENST00000424234 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
ACTN4-203ENST00000424234 MAP2P11137 1827 aaKnown RBP19.16■□□□□ 0.66
ACTN4-203ENST00000424234 PER1O15534 1290 aaPredicted RBP19.15■□□□□ 0.66
ACTN4-203ENST00000424234 PIP4K2BP78356 416 aa19.15■□□□□ 0.66
ACTN4-203ENST00000424234 SHPRHQ149N8 1683 aa19.15■□□□□ 0.66
ACTN4-203ENST00000424234 COL22A1Q8NFW1 1626 aaPredicted RBP19.15■□□□□ 0.66
ACTN4-203ENST00000424234 MED1Q15648 1581 aaPredicted RBP19.15■□□□□ 0.66
ACTN4-203ENST00000424234 LTN1O94822 1766 aa19.15■□□□□ 0.66
ACTN4-203ENST00000424234 XPCQ01831 940 aaPredicted RBP19.15■□□□□ 0.66
ACTN4-203ENST00000424234 SUPT16HQ9Y5B9 1047 aaKnown RBP19.15■□□□□ 0.66
ACTN4-203ENST00000424234 TNS3Q68CZ2 1445 aa19.14■□□□□ 0.66
ACTN4-203ENST00000424234 SOS2Q07890 1332 aaPredicted RBP19.13■□□□□ 0.65
ACTN4-203ENST00000424234 PSME1Q06323 249 aa19.13■□□□□ 0.65
ACTN4-203ENST00000424234 SBNO1A3KN83 1393 aa19.13■□□□□ 0.65
ACTN4-203ENST00000424234 TTC21BQ7Z4L5 1316 aa19.12■□□□□ 0.65
ACTN4-203ENST00000424234 TTC21AQ8NDW8 1320 aa19.12■□□□□ 0.65
ACTN4-203ENST00000424234 OVOS2A0A0J9YW53 1432 aa19.11■□□□□ 0.65
ACTN4-203ENST00000424234 OVOS2Q6IE36 1432 aa19.11■□□□□ 0.65
ACTN4-203ENST00000424234 KRT28Q7Z3Y7 464 aa19.11■□□□□ 0.65
ACTN4-203ENST00000424234 KNSTRNQ9Y448 316 aa19.1■□□□□ 0.65
ACTN4-203ENST00000424234 NPC1L1Q9UHC9 1359 aa19.1■□□□□ 0.65
ACTN4-203ENST00000424234 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
ACTN4-203ENST00000424234 AMER1Q5JTC6 1135 aaPredicted RBP19.1■□□□□ 0.65
ACTN4-203ENST00000424234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.1■□□□□ 0.65
ACTN4-203ENST00000424234 NSD2O96028 1365 aa19.1■□□□□ 0.65
ACTN4-203ENST00000424234 SLIT3O75094 1523 aa19.09■□□□□ 0.65
ACTN4-203ENST00000424234 NME9Q86XW9 330 aa19.07■□□□□ 0.64
ACTN4-203ENST00000424234 PRKRIP1Q9H875 184 aaPredicted RBP19.07■□□□□ 0.64
ACTN4-203ENST00000424234 SPATA31A3Q5VYP0 1347 aa19.07■□□□□ 0.64
ACTN4-203ENST00000424234 USP31Q70CQ4 1352 aa19.07■□□□□ 0.64
ACTN4-203ENST00000424234 PAK3O75914 559 aaPredicted RBP19.06■□□□□ 0.64
ACTN4-203ENST00000424234 FYB1O15117 783 aa19.06■□□□□ 0.64
ACTN4-203ENST00000424234 RGPD5Q99666 1765 aa19.06■□□□□ 0.64
ACTN4-203ENST00000424234 NFAT5O94916 1531 aa19.05■□□□□ 0.64
ACTN4-203ENST00000424234 ARHGEF10O15013 1369 aa19.05■□□□□ 0.64
ACTN4-203ENST00000424234 GGNBP2Q9H3C7 697 aa19.04■□□□□ 0.64
ACTN4-203ENST00000424234 ZRANB1Q9UGI0 708 aa19.04■□□□□ 0.64
ACTN4-203ENST00000424234 PARD3Q8TEW0 1356 aa19.03■□□□□ 0.64
ACTN4-203ENST00000424234 CC2D1BQ5T0F9 858 aaKnown RBP19.02■□□□□ 0.64
ACTN4-203ENST00000424234 ABTB2Q8N961 1025 aa19.02■□□□□ 0.64
ACTN4-203ENST00000424234 PNPLA6Q8IY17 1366 aa19.02■□□□□ 0.64
ACTN4-203ENST00000424234 PEAK1Q9H792 1746 aa19.02■□□□□ 0.64
ACTN4-203ENST00000424234 USP19O94966 1318 aa19.01■□□□□ 0.63
ACTN4-203ENST00000424234 NUTM2GQ5VZR2 741 aa19.01■□□□□ 0.63
ACTN4-203ENST00000424234 LMOD2Q6P5Q4 547 aa19■□□□□ 0.63
ACTN4-203ENST00000424234 COL18A1P39060 1754 aa18.99■□□□□ 0.63
ACTN4-203ENST00000424234 NLRP6P59044 892 aa18.99■□□□□ 0.63
ACTN4-203ENST00000424234 CNGB1Q14028 1251 aaPredicted RBP18.99■□□□□ 0.63
ACTN4-203ENST00000424234 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.632e-6■■■■□ 21.2
ACTN4-203ENST00000424234 LRRC59Q96AG4 307 aaKnown RBP18.98■□□□□ 0.63
ACTN4-203ENST00000424234 COG3Q96JB2 828 aa18.98■□□□□ 0.63
ACTN4-203ENST00000424234 PLCH1Q4KWH8 1693 aa18.98■□□□□ 0.63
ACTN4-203ENST00000424234 NEFLP07196 543 aa18.97■□□□□ 0.63
ACTN4-203ENST00000424234 HSPA1LP34931 641 aa18.97■□□□□ 0.63
ACTN4-203ENST00000424234 NLRP13Q86W25 1043 aa18.97■□□□□ 0.63
ACTN4-203ENST00000424234 SMG6Q86US8 1419 aaKnown RBP18.96■□□□□ 0.62
ACTN4-203ENST00000424234 LMO7Q8WWI1 1683 aa18.95■□□□□ 0.62
ACTN4-203ENST00000424234 JCADQ9P266 1359 aa18.95■□□□□ 0.62
ACTN4-203ENST00000424234 MORC1Q86VD1 984 aa18.95■□□□□ 0.62
ACTN4-203ENST00000424234 FBXO41Q8TF61 875 aa18.95■□□□□ 0.62
ACTN4-203ENST00000424234 RGPD2P0DJD1 1756 aa18.94■□□□□ 0.62
ACTN4-203ENST00000424234 MRS2Q9HD23 443 aa18.94■□□□□ 0.62
ACTN4-203ENST00000424234 COL14A1Q05707 1796 aaKnown RBP18.94■□□□□ 0.62
ACTN4-203ENST00000424234 AATKQ6ZMQ8 1374 aa18.94■□□□□ 0.62
ACTN4-203ENST00000424234 ABCC6O95255 1503 aa18.94■□□□□ 0.62
ACTN4-203ENST00000424234 RALBP1Q15311 655 aa18.93■□□□□ 0.62
ACTN4-203ENST00000424234 CCDC184Q52MB2 194 aa18.93■□□□□ 0.62
ACTN4-203ENST00000424234 FKBP8Q14318 412 aa18.92■□□□□ 0.62
ACTN4-203ENST00000424234 CABLES1Q8TDN4 633 aa18.92■□□□□ 0.62
ACTN4-203ENST00000424234 NRAPQ86VF7 1730 aa18.91■□□□□ 0.62
ACTN4-203ENST00000424234 NWD2Q9ULI1 1742 aa18.91■□□□□ 0.62
ACTN4-203ENST00000424234 FAM208AQ9UK61 1670 aaKnown RBP18.91■□□□□ 0.62
ACTN4-203ENST00000424234 PLEKHG5O94827 1062 aa18.91■□□□□ 0.62
ACTN4-203ENST00000424234 TNNT2P45379 298 aaPredicted RBP18.91■□□□□ 0.62
ACTN4-203ENST00000424234 CDK12Q9NYV4 1490 aaPredicted RBP18.91■□□□□ 0.62
ACTN4-203ENST00000424234 LRP6O75581 1613 aa18.9■□□□□ 0.62
ACTN4-203ENST00000424234 SOX12O15370 315 aa18.9■□□□□ 0.62
ACTN4-203ENST00000424234 FBLN1P23142 703 aa18.89■□□□□ 0.62
ACTN4-203ENST00000424234 MYBBP1AQ9BQG0 1328 aaKnown RBP18.89■□□□□ 0.61
ACTN4-203ENST00000424234 GCP02774 474 aa18.89■□□□□ 0.61
ACTN4-203ENST00000424234 KCNH5Q8NCM2 988 aa18.89■□□□□ 0.61
ACTN4-203ENST00000424234 COL3A1P02461 1466 aaPredicted RBP18.88■□□□□ 0.61
ACTN4-203ENST00000424234 CPDO75976 1380 aa18.88■□□□□ 0.61
ACTN4-203ENST00000424234 PPP2R1AP30153 589 aa18.88■□□□□ 0.61
ACTN4-203ENST00000424234 RGPD1P0DJD0 1748 aa18.87■□□□□ 0.61
ACTN4-203ENST00000424234 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms