RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 TRIM47Q96LD4 638 aa5.68□□□□□ -1.5
PMS1-209ENST00000424059 PLEKHG3A1L390 1219 aa5.67□□□□□ -1.5
PMS1-209ENST00000424059 ALDH1A1P00352 501 aa5.67□□□□□ -1.5
PMS1-209ENST00000424059 VARSP26640 1264 aaKnown RBP5.67□□□□□ -1.5
PMS1-209ENST00000424059 HPS1Q92902 700 aa5.67□□□□□ -1.5
PMS1-209ENST00000424059 PSMG3-AS1Q96PY0 264 aa5.67□□□□□ -1.5
PMS1-209ENST00000424059 RIC3Q7Z5B4 369 aa5.67□□□□□ -1.5
PMS1-209ENST00000424059 WASF2Q9Y6W5 498 aa5.67□□□□□ -1.5
PMS1-209ENST00000424059 PDE4DQ08499 809 aa5.66□□□□□ -1.5
PMS1-209ENST00000424059 ZNF511Q8NB15 262 aa5.66□□□□□ -1.5
PMS1-209ENST00000424059 LCE3BQ5TA77 95 aa5.65□□□□□ -1.5
PMS1-209ENST00000424059 F12P00748 615 aaPredicted RBP5.65□□□□□ -1.51
PMS1-209ENST00000424059 HRCP23327 699 aa5.65□□□□□ -1.51
PMS1-209ENST00000424059 LCE2AQ5TA79 106 aaPredicted RBP5.65□□□□□ -1.51
PMS1-209ENST00000424059 BAP1Q92560 729 aa5.65□□□□□ -1.51
PMS1-209ENST00000424059 WFS1O76024 890 aa5.64□□□□□ -1.51
PMS1-209ENST00000424059 ARMC2Q8NEN0 867 aa5.64□□□□□ -1.51
PMS1-209ENST00000424059 FAM174AQ8TBP5 190 aa5.64□□□□□ -1.51
PMS1-209ENST00000424059 CFAP99D6REC4 459 aa5.64□□□□□ -1.51
PMS1-209ENST00000424059 RSPH6AQ9H0K4 717 aa5.64□□□□□ -1.51
PMS1-209ENST00000424059 CTHP32929 405 aa5.63□□□□□ -1.51
PMS1-209ENST00000424059 LINC01559Q495D7 138 aa5.63□□□□□ -1.51
PMS1-209ENST00000424059 MYSM1Q5VVJ2 828 aa5.63□□□□□ -1.51
PMS1-209ENST00000424059 PCDHB15Q9Y5E8 787 aa5.63□□□□□ -1.51
PMS1-209ENST00000424059 CAPN5O15484 640 aaPredicted RBP5.62□□□□□ -1.51
PMS1-209ENST00000424059 WIPF1O43516 503 aa5.62□□□□□ -1.51
PMS1-209ENST00000424059 LILRB3O75022 631 aa5.62□□□□□ -1.51
PMS1-209ENST00000424059 NPAS3Q8IXF0 933 aa5.62□□□□□ -1.51
PMS1-209ENST00000424059 HELBQ8NG08 1087 aaPredicted RBP5.62□□□□□ -1.51
PMS1-209ENST00000424059 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
PMS1-209ENST00000424059 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
PMS1-209ENST00000424059 SNRPBP14678 240 aaKnown RBP5.61□□□□□ -1.51
PMS1-209ENST00000424059 NFX1Q12986 1120 aaKnown RBP5.61□□□□□ -1.51
PMS1-209ENST00000424059 GPKOWQ92917 476 aaPredicted RBP eCLIP5.61□□□□□ -1.51
PMS1-209ENST00000424059 CDK15Q96Q40 435 aa5.61□□□□□ -1.51
PMS1-209ENST00000424059 TERTO14746 1132 aaKnown RBP5.6□□□□□ -1.51
PMS1-209ENST00000424059 CLK2P49760 499 aaKnown RBP5.6□□□□□ -1.51
PMS1-209ENST00000424059 NBPF14Q5TI25 921 aa5.6□□□□□ -1.51
PMS1-209ENST00000424059 BPHLQ86WA6 291 aaPredicted RBP5.6□□□□□ -1.51
PMS1-209ENST00000424059 CABLES1Q8TDN4 633 aa5.6□□□□□ -1.51
PMS1-209ENST00000424059 LIMD1Q9UGP4 676 aa5.6□□□□□ -1.51
PMS1-209ENST00000424059 TLL2Q9Y6L7 1015 aa5.6□□□□□ -1.51
PMS1-209ENST00000424059 SLC24A1O60721 1099 aa5.6□□□□□ -1.51
PMS1-209ENST00000424059 ADH1CP00326 375 aa5.6□□□□□ -1.51
PMS1-209ENST00000424059 NNTQ13423 1086 aa5.6□□□□□ -1.51
PMS1-209ENST00000424059 SLC24A3Q9HC58 644 aa5.6□□□□□ -1.51
PMS1-209ENST00000424059 NUTM2BA6NNL0 878 aaPredicted RBP5.59□□□□□ -1.51
PMS1-209ENST00000424059 NUTM2EB1AL46 878 aaPredicted RBP5.59□□□□□ -1.51
PMS1-209ENST00000424059 INSM1Q01101 510 aaPredicted RBP5.59□□□□□ -1.51
PMS1-209ENST00000424059 NR5A1Q13285 461 aa5.59□□□□□ -1.51
PMS1-209ENST00000424059 NUTM2DQ5VT03 806 aaPredicted RBP5.59□□□□□ -1.51
PMS1-209ENST00000424059 TRIM46Q7Z4K8 759 aa5.59□□□□□ -1.51
PMS1-209ENST00000424059 NUTM2AQ8IVF1 878 aaPredicted RBP5.59□□□□□ -1.51
PMS1-209ENST00000424059 MAP10Q9P2G4 905 aa5.59□□□□□ -1.51
PMS1-209ENST00000424059 SLC16A10Q8TF71 515 aa5.58□□□□□ -1.52
PMS1-209ENST00000424059 C1QTNF2Q9BXJ5 285 aa5.58□□□□□ -1.52
PMS1-209ENST00000424059 MAP4K5Q9Y4K4 846 aa5.58□□□□□ -1.52
PMS1-209ENST00000424059 SCARF1Q14162 830 aa5.58□□□□□ -1.52
PMS1-209ENST00000424059 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
PMS1-209ENST00000424059 TIMP2P16035 220 aa5.57□□□□□ -1.52
PMS1-209ENST00000424059 CSPP1Q1MSJ5 1256 aa5.57□□□□□ -1.52
PMS1-209ENST00000424059 TRMT44Q8IYL2 757 aaKnown RBP5.57□□□□□ -1.52
PMS1-209ENST00000424059 ZC3H4Q9UPT8 1303 aaKnown RBP5.57□□□□□ -1.52
PMS1-209ENST00000424059 QPCTQ16769 361 aa5.57□□□□□ -1.52
PMS1-209ENST00000424059 SH3D19Q5HYK7 790 aa5.57□□□□□ -1.52
PMS1-209ENST00000424059 FOXJ1Q92949 421 aa5.57□□□□□ -1.52
PMS1-209ENST00000424059 WDR4P57081 412 aaKnown RBP5.56□□□□□ -1.52
PMS1-209ENST00000424059 AGERQ15109 404 aa5.56□□□□□ -1.52
PMS1-209ENST00000424059 MRPL14Q6P1L8 145 aaKnown RBP5.56□□□□□ -1.52
PMS1-209ENST00000424059 NXF1Q9UBU9 619 aaKnown RBP5.56□□□□□ -1.52
PMS1-209ENST00000424059 PER1O15534 1290 aaPredicted RBP5.55□□□□□ -1.52
PMS1-209ENST00000424059 SH3BP5LQ7L8J4 393 aa5.55□□□□□ -1.52
PMS1-209ENST00000424059 SH3RF1Q7Z6J0 888 aa5.55□□□□□ -1.52
PMS1-209ENST00000424059 DDRGK1Q96HY6 314 aa5.55□□□□□ -1.52
PMS1-209ENST00000424059 KLF16Q9BXK1 252 aaPredicted RBP5.55□□□□□ -1.52
PMS1-209ENST00000424059 BMP1P13497 986 aa5.55□□□□□ -1.52
PMS1-209ENST00000424059 SKIV2LQ15477 1246 aaKnown RBP5.55□□□□□ -1.52
PMS1-209ENST00000424059 TSC1Q92574 1164 aa5.55□□□□□ -1.52
PMS1-209ENST00000424059 RTL5Q5HYW3 569 aaPredicted RBP5.54□□□□□ -1.52
PMS1-209ENST00000424059 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
PMS1-209ENST00000424059 KRTAP9-4Q9BYQ2 154 aa5.54□□□□□ -1.52
PMS1-209ENST00000424059 CDV3Q9UKY7 258 aaKnown RBP5.54□□□□□ -1.52
PMS1-209ENST00000424059 C4orf48Q5BLP8 95 aa5.53□□□□□ -1.52
PMS1-209ENST00000424059 PPP2R2DQ66LE6 453 aa5.53□□□□□ -1.52
PMS1-209ENST00000424059 BCANQ96GW7 911 aa5.53□□□□□ -1.52
PMS1-209ENST00000424059 ZFP42Q96MM3 310 aa5.53□□□□□ -1.52
PMS1-209ENST00000424059 H3BM21 787 aa5.53□□□□□ -1.52
PMS1-209ENST00000424059 PDXDC2PQ6P474 469 aa5.53□□□□□ -1.52
PMS1-209ENST00000424059 PNMA1Q8ND90 353 aa5.53□□□□□ -1.52
PMS1-209ENST00000424059 IRF7Q92985 503 aa5.53□□□□□ -1.52
PMS1-209ENST00000424059 ZIC2O95409 532 aaPredicted RBP5.52□□□□□ -1.53
PMS1-209ENST00000424059 GRM5P41594 1212 aa5.52□□□□□ -1.53
PMS1-209ENST00000424059 ARID5BQ14865 1188 aa5.52□□□□□ -1.53
PMS1-209ENST00000424059 EMILIN1Q9Y6C2 1016 aa5.52□□□□□ -1.53
PMS1-209ENST00000424059 UPP2O95045 317 aa5.52□□□□□ -1.53
PMS1-209ENST00000424059 MEIOBQ8N635 442 aa5.52□□□□□ -1.53
PMS1-209ENST00000424059 GPSM3Q9Y4H4 160 aa5.52□□□□□ -1.53
PMS1-209ENST00000424059 FAM181BA6NEQ2 426 aa5.51□□□□□ -1.53
PMS1-209ENST00000424059 VASH1Q7L8A9 365 aaPredicted RBP5.51□□□□□ -1.53
PMS1-209ENST00000424059 KDM4CQ9H3R0 1056 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms