RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 EN1Q05925 392 aaPredicted RBP12.56□□□□□ -0.4
CLCN3P1-201ENST00000423965 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
CLCN3P1-201ENST00000423965 GLI3P10071 1580 aa12.56□□□□□ -0.4
CLCN3P1-201ENST00000423965 MYOM3Q5VTT5 1437 aa12.55□□□□□ -0.4
CLCN3P1-201ENST00000423965 ORAI2Q96SN7 254 aa12.55□□□□□ -0.4
CLCN3P1-201ENST00000423965 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
CLCN3P1-201ENST00000423965 TMEM131LA2VDJ0 1609 aa12.55□□□□□ -0.4
CLCN3P1-201ENST00000423965 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
CLCN3P1-201ENST00000423965 SLIT2O94813 1529 aa12.54□□□□□ -0.4
CLCN3P1-201ENST00000423965 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
CLCN3P1-201ENST00000423965 VPS72Q15906 364 aa12.54□□□□□ -0.4
CLCN3P1-201ENST00000423965 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
CLCN3P1-201ENST00000423965 METRNQ9UJH8 293 aa12.53□□□□□ -0.4
CLCN3P1-201ENST00000423965 NINLQ9Y2I6 1382 aa12.53□□□□□ -0.4
CLCN3P1-201ENST00000423965 RGL2O15211 777 aa12.52□□□□□ -0.41
CLCN3P1-201ENST00000423965 C7P10643 843 aa12.52□□□□□ -0.41
CLCN3P1-201ENST00000423965 MYO5BQ9ULV0 1848 aa12.52□□□□□ -0.41
CLCN3P1-201ENST00000423965 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
CLCN3P1-201ENST00000423965 PPP1R1BQ9UD71 204 aaPredicted RBP12.51□□□□□ -0.41
CLCN3P1-201ENST00000423965 NPHP3Q7Z494 1330 aa12.51□□□□□ -0.41
CLCN3P1-201ENST00000423965 DISP2A7MBM2 1401 aa12.51□□□□□ -0.41
CLCN3P1-201ENST00000423965 XRN1Q8IZH2 1706 aaKnown RBP12.51□□□□□ -0.41
CLCN3P1-201ENST00000423965 MARF1Q9Y4F3 1742 aaKnown RBP12.51□□□□□ -0.41
CLCN3P1-201ENST00000423965 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
CLCN3P1-201ENST00000423965 CEP350Q5VT06 3117 aa12.49□□□□□ -0.41
CLCN3P1-201ENST00000423965 GCC2Q8IWJ2 1684 aa12.49□□□□□ -0.41
CLCN3P1-201ENST00000423965 SPON1Q9HCB6 807 aa12.49□□□□□ -0.41
CLCN3P1-201ENST00000423965 EZH2Q15910 746 aaKnown RBP12.48□□□□□ -0.41
CLCN3P1-201ENST00000423965 METP08581 1390 aa12.47□□□□□ -0.41
CLCN3P1-201ENST00000423965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
CLCN3P1-201ENST00000423965 SEC24BO95487 1268 aa12.47□□□□□ -0.41
CLCN3P1-201ENST00000423965 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
CLCN3P1-201ENST00000423965 CAMKK2Q96RR4 588 aa12.47□□□□□ -0.41
CLCN3P1-201ENST00000423965 ABCC5O15440 1437 aa12.46□□□□□ -0.41
CLCN3P1-201ENST00000423965 UTRNP46939 3433 aa12.46□□□□□ -0.41
CLCN3P1-201ENST00000423965 PARD3Q8TEW0 1356 aa12.46□□□□□ -0.41
CLCN3P1-201ENST00000423965 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
CLCN3P1-201ENST00000423965 CCDC9Q9Y3X0 531 aaKnown RBP12.46□□□□□ -0.41
CLCN3P1-201ENST00000423965 LRPPRCP42704 1394 aaKnown RBP12.45□□□□□ -0.42
CLCN3P1-201ENST00000423965 KCNQ2O43526 872 aa12.45□□□□□ -0.42
CLCN3P1-201ENST00000423965 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
CLCN3P1-201ENST00000423965 NBPF8Q3BBV2 869 aa12.45□□□□□ -0.42
CLCN3P1-201ENST00000423965 IER5LQ5T953 404 aa12.45□□□□□ -0.42
CLCN3P1-201ENST00000423965 NBPF14Q5TI25 921 aa12.45□□□□□ -0.42
CLCN3P1-201ENST00000423965 ANKRD30AQ9BXX3 1397 aa12.44□□□□□ -0.42
CLCN3P1-201ENST00000423965 LHX8Q68G74 356 aa12.44□□□□□ -0.42
CLCN3P1-201ENST00000423965 RGPD1P0DJD0 1748 aa12.43□□□□□ -0.42
CLCN3P1-201ENST00000423965 PXDNQ92626 1479 aa12.43□□□□□ -0.42
CLCN3P1-201ENST00000423965 A0A0G2JS52 829 aa12.43□□□□□ -0.42
CLCN3P1-201ENST00000423965 FOXO3O43524 673 aa12.43□□□□□ -0.42
CLCN3P1-201ENST00000423965 MYT1Q01538 1121 aa12.43□□□□□ -0.42
CLCN3P1-201ENST00000423965 ESCO1Q5FWF5 840 aa12.43□□□□□ -0.42
CLCN3P1-201ENST00000423965 NALCNQ8IZF0 1738 aa12.42□□□□□ -0.42
CLCN3P1-201ENST00000423965 FAM98CQ17RN3 349 aaKnown RBP12.41□□□□□ -0.42
CLCN3P1-201ENST00000423965 PTPN23Q9H3S7 1636 aa12.4□□□□□ -0.42
CLCN3P1-201ENST00000423965 ADGRL2O95490 1459 aa12.4□□□□□ -0.42
CLCN3P1-201ENST00000423965 SPATA31A3Q5VYP0 1347 aa12.4□□□□□ -0.42
CLCN3P1-201ENST00000423965 AMER1Q5JTC6 1135 aaPredicted RBP12.4□□□□□ -0.42
CLCN3P1-201ENST00000423965 NRXN3Q9Y4C0 1643 aa12.4□□□□□ -0.42
CLCN3P1-201ENST00000423965 STK25O00506 426 aa12.39□□□□□ -0.43
CLCN3P1-201ENST00000423965 PLCG2P16885 1265 aa12.39□□□□□ -0.43
CLCN3P1-201ENST00000423965 XPCQ01831 940 aaPredicted RBP12.39□□□□□ -0.43
CLCN3P1-201ENST00000423965 COLQQ9Y215 455 aaPredicted RBP12.39□□□□□ -0.43
CLCN3P1-201ENST00000423965 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
CLCN3P1-201ENST00000423965 APBA3O96018 575 aa12.38□□□□□ -0.43
CLCN3P1-201ENST00000423965 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
CLCN3P1-201ENST00000423965 FAM196AQ6ZSG2 479 aa12.38□□□□□ -0.43
CLCN3P1-201ENST00000423965 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
CLCN3P1-201ENST00000423965 DAPK1P53355 1430 aa12.37□□□□□ -0.43
CLCN3P1-201ENST00000423965 POTEFA5A3E0 1075 aa12.37□□□□□ -0.43
CLCN3P1-201ENST00000423965 GIGYF1O75420 1035 aaPredicted RBP12.37□□□□□ -0.43
CLCN3P1-201ENST00000423965 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
CLCN3P1-201ENST00000423965 CHIC2Q9UKJ5 165 aa12.37□□□□□ -0.43
CLCN3P1-201ENST00000423965 NWD2Q9ULI1 1742 aa12.37□□□□□ -0.43
CLCN3P1-201ENST00000423965 TRIM37O94972 964 aa12.36□□□□□ -0.43
CLCN3P1-201ENST00000423965 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
CLCN3P1-201ENST00000423965 USP32Q8NFA0 1604 aa12.36□□□□□ -0.43
CLCN3P1-201ENST00000423965 CROCC2H7BZ55 1655 aa12.35□□□□□ -0.43
CLCN3P1-201ENST00000423965 ROBO2Q9HCK4 1378 aa12.35□□□□□ -0.43
CLCN3P1-201ENST00000423965 FAM83GA6ND36 823 aa12.35□□□□□ -0.43
CLCN3P1-201ENST00000423965 POTEB2H3BUK9 544 aa12.35□□□□□ -0.43
CLCN3P1-201ENST00000423965 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
CLCN3P1-201ENST00000423965 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
CLCN3P1-201ENST00000423965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLCN3P1-201ENST00000423965 HFM1A2PYH4 1435 aa12.35□□□□□ -0.43
CLCN3P1-201ENST00000423965 ZNF326Q5BKZ1 582 aaKnown RBP12.34□□□□□ -0.43
CLCN3P1-201ENST00000423965 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
CLCN3P1-201ENST00000423965 CHD4Q14839 1912 aa12.34□□□□□ -0.43
CLCN3P1-201ENST00000423965 CAMTA1Q9Y6Y1 1673 aa12.34□□□□□ -0.43
CLCN3P1-201ENST00000423965 ADGRB2O60241 1585 aa12.34□□□□□ -0.43
CLCN3P1-201ENST00000423965 TNS1Q9HBL0 1735 aaKnown RBP12.34□□□□□ -0.43
CLCN3P1-201ENST00000423965 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
CLCN3P1-201ENST00000423965 PRAG1Q86YV5 1406 aa12.33□□□□□ -0.44
CLCN3P1-201ENST00000423965 ANKRD50Q9ULJ7 1429 aa12.32□□□□□ -0.44
CLCN3P1-201ENST00000423965 CCDC144AA2RUR9 1427 aa12.31□□□□□ -0.44
CLCN3P1-201ENST00000423965 IQGAP3Q86VI3 1631 aa12.31□□□□□ -0.44
CLCN3P1-201ENST00000423965 PSME1Q06323 249 aa12.31□□□□□ -0.44
CLCN3P1-201ENST00000423965 KANK4Q5T7N3 995 aaPredicted RBP12.31□□□□□ -0.44
CLCN3P1-201ENST00000423965 CABLES1Q8TDN4 633 aa12.31□□□□□ -0.44
CLCN3P1-201ENST00000423965 SPATA31A5Q5VU36 1347 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms