RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 KCPQ6ZWJ8 1503 aa3.81□□□□□ -1.8
UBE2W-202ENST00000422906 COL3A1P02461 1466 aaPredicted RBP3.81□□□□□ -1.8
UBE2W-202ENST00000422906 HTTP42858 3142 aa3.81□□□□□ -1.8
UBE2W-202ENST00000422906 RIMS2Q9UQ26 1411 aa3.8□□□□□ -1.8
UBE2W-202ENST00000422906 RGS19P49795 217 aa3.8□□□□□ -1.8
UBE2W-202ENST00000422906 METP08581 1390 aa3.8□□□□□ -1.8
UBE2W-202ENST00000422906 PCNTO95613 3336 aa3.8□□□□□ -1.8
UBE2W-202ENST00000422906 ANKARQ7Z5J8 1434 aa3.8□□□□□ -1.8
UBE2W-202ENST00000422906 EFCAB2Q5VUJ9 269 aa3.79□□□□□ -1.8
UBE2W-202ENST00000422906 CD163L1Q9NR16 1453 aa3.79□□□□□ -1.8
UBE2W-202ENST00000422906 LAMB2P55268 1798 aa3.79□□□□□ -1.8
UBE2W-202ENST00000422906 BRCA2P51587 3418 aa3.79□□□□□ -1.8
UBE2W-202ENST00000422906 CCDC144AA2RUR9 1427 aa3.79□□□□□ -1.8
UBE2W-202ENST00000422906 SNED1Q8TER0 1413 aa3.78□□□□□ -1.8
UBE2W-202ENST00000422906 NSD2O96028 1365 aa3.78□□□□□ -1.8
UBE2W-202ENST00000422906 SMG6Q86US8 1419 aaKnown RBP3.78□□□□□ -1.8
UBE2W-202ENST00000422906 SBNO1A3KN83 1393 aa3.78□□□□□ -1.8
UBE2W-202ENST00000422906 CCDC88AQ3V6T2 1871 aa3.78□□□□□ -1.81
UBE2W-202ENST00000422906 YY1P25490 414 aa3.77□□□□□ -1.81
UBE2W-202ENST00000422906 FBXO31Q5XUX0 539 aaPredicted RBP3.77□□□□□ -1.81
UBE2W-202ENST00000422906 BRINP3Q76B58 766 aa3.77□□□□□ -1.81
UBE2W-202ENST00000422906 TNS2Q63HR2 1409 aa3.77□□□□□ -1.81
UBE2W-202ENST00000422906 ROBO2Q9HCK4 1378 aa3.77□□□□□ -1.81
UBE2W-202ENST00000422906 PRUNE2Q8WUY3 3088 aa3.77□□□□□ -1.81
UBE2W-202ENST00000422906 MUC3AQ02505 3323 aa3.77□□□□□ -1.81
UBE2W-202ENST00000422906 REV3LO60673 3130 aa3.76□□□□□ -1.81
UBE2W-202ENST00000422906 MYCNP04198 464 aaPredicted RBP3.76□□□□□ -1.81
UBE2W-202ENST00000422906 JMYQ8N9B5 988 aa3.76□□□□□ -1.81
UBE2W-202ENST00000422906 ZC3H4Q9UPT8 1303 aaKnown RBP3.76□□□□□ -1.81
UBE2W-202ENST00000422906 TNS3Q68CZ2 1445 aa3.76□□□□□ -1.81
UBE2W-202ENST00000422906 CACNA1SQ13698 1873 aa3.75□□□□□ -1.81
UBE2W-202ENST00000422906 SENP3-EIF4A1A0A087X0R7 540 aa3.75□□□□□ -1.81
UBE2W-202ENST00000422906 TRPM7Q96QT4 1865 aa3.75□□□□□ -1.81
UBE2W-202ENST00000422906 POLR3AO14802 1390 aaPredicted RBP3.75□□□□□ -1.81
UBE2W-202ENST00000422906 TBX22Q9Y458 520 aa3.75□□□□□ -1.81
UBE2W-202ENST00000422906 NAIPQ13075 1403 aa3.75□□□□□ -1.81
UBE2W-202ENST00000422906 PTGER2P43116 358 aa3.75□□□□□ -1.81
UBE2W-202ENST00000422906 SCN4AP35499 1836 aa3.74□□□□□ -1.81
UBE2W-202ENST00000422906 ZNF644Q9H582 1327 aaPredicted RBP3.74□□□□□ -1.81
UBE2W-202ENST00000422906 CPDO75976 1380 aa3.74□□□□□ -1.81
UBE2W-202ENST00000422906 ECM29Q5VYK3 1845 aa3.74□□□□□ -1.81
UBE2W-202ENST00000422906 CAMKK2Q96RR4 588 aa3.73□□□□□ -1.81
UBE2W-202ENST00000422906 DNAJC5GQ8N7S2 189 aa3.73□□□□□ -1.81
UBE2W-202ENST00000422906 INSRP06213 1382 aa3.73□□□□□ -1.81
UBE2W-202ENST00000422906 KIAA0232Q92628 1395 aa3.73□□□□□ -1.81
UBE2W-202ENST00000422906 ARAP2Q8WZ64 1704 aa3.73□□□□□ -1.81
UBE2W-202ENST00000422906 DCAF8L1A6NGE4 600 aa3.73□□□□□ -1.81
UBE2W-202ENST00000422906 TAF1P21675 1872 aa3.72□□□□□ -1.81
UBE2W-202ENST00000422906 ANKRD36CQ5JPF3 1778 aa3.72□□□□□ -1.81
UBE2W-202ENST00000422906 DDX60Q8IY21 1712 aaKnown RBP3.72□□□□□ -1.81
UBE2W-202ENST00000422906 MRC1P22897 1456 aa3.72□□□□□ -1.81
UBE2W-202ENST00000422906 ALPK3Q96L96 1907 aa3.72□□□□□ -1.81
UBE2W-202ENST00000422906 MYH14Q7Z406 1995 aaKnown RBP3.71□□□□□ -1.81
UBE2W-202ENST00000422906 USP19O94966 1318 aa3.71□□□□□ -1.81
UBE2W-202ENST00000422906 SSUH2Q9Y2M2 353 aa3.71□□□□□ -1.82
UBE2W-202ENST00000422906 SIRT1Q96EB6 747 aa3.71□□□□□ -1.82
UBE2W-202ENST00000422906 ATF5Q9Y2D1 282 aaPredicted RBP3.71□□□□□ -1.82
UBE2W-202ENST00000422906 ARIH1Q9Y4X5 557 aaPredicted RBP3.71□□□□□ -1.82
UBE2W-202ENST00000422906 HRCP23327 699 aa3.7□□□□□ -1.82
UBE2W-202ENST00000422906 RSPH4AQ5TD94 716 aa3.7□□□□□ -1.82
UBE2W-202ENST00000422906 FOXD4L1Q9NU39 408 aa3.7□□□□□ -1.82
UBE2W-202ENST00000422906 COL2A1P02458 1487 aaPredicted RBP3.7□□□□□ -1.82
UBE2W-202ENST00000422906 CSRNP3Q8WYN3 585 aa3.7□□□□□ -1.82
UBE2W-202ENST00000422906 SPAG9O60271 1321 aaKnown RBP3.69□□□□□ -1.82
UBE2W-202ENST00000422906 PLEKHD1A6NEE1 506 aa3.69□□□□□ -1.82
UBE2W-202ENST00000422906 FRMPD3Q5JV73 1810 aa3.69□□□□□ -1.82
UBE2W-202ENST00000422906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.69□□□□□ -1.82
UBE2W-202ENST00000422906 RXRBP28702 533 aa3.69□□□□□ -1.82
UBE2W-202ENST00000422906 RBM6P78332 1123 aaKnown RBP3.69□□□□□ -1.82
UBE2W-202ENST00000422906 HNRNPUL2Q1KMD3 747 aaKnown RBP3.69□□□□□ -1.82
UBE2W-202ENST00000422906 PLEKHG2Q9H7P9 1386 aa3.69□□□□□ -1.82
UBE2W-202ENST00000422906 GCC1Q96CN9 775 aa3.69□□□□□ -1.82
UBE2W-202ENST00000422906 ABCC11Q96J66 1382 aa3.69□□□□□ -1.82
UBE2W-202ENST00000422906 EYSQ5T1H1 3165 aa3.69□□□□□ -1.82
UBE2W-202ENST00000422906 SLAIN2Q9P270 581 aa3.68□□□□□ -1.82
UBE2W-202ENST00000422906 KIF15Q9NS87 1388 aa3.68□□□□□ -1.82
UBE2W-202ENST00000422906 ANKLE2Q86XL3 938 aa3.68□□□□□ -1.82
UBE2W-202ENST00000422906 KCNH8Q96L42 1107 aa3.68□□□□□ -1.82
UBE2W-202ENST00000422906 NSD3Q9BZ95 1437 aa3.68□□□□□ -1.82
UBE2W-202ENST00000422906 AFF2P51816 1311 aa3.68□□□□□ -1.82
UBE2W-202ENST00000422906 APLP1P51693 650 aa3.67□□□□□ -1.82
UBE2W-202ENST00000422906 SAMD1Q6SPF0 538 aaPredicted RBP3.67□□□□□ -1.82
UBE2W-202ENST00000422906 BRD4O60885 1362 aaPredicted RBP3.67□□□□□ -1.82
UBE2W-202ENST00000422906 SZT2Q5T011 3432 aa3.67□□□□□ -1.82
UBE2W-202ENST00000422906 THEMISQ8N1K5 641 aaPredicted RBP3.67□□□□□ -1.82
UBE2W-202ENST00000422906 HSPA6P17066 643 aa3.67□□□□□ -1.82
UBE2W-202ENST00000422906 FXR2P51116 673 aaKnown RBP eCLIP3.67□□□□□ -1.82
UBE2W-202ENST00000422906 MKRN4PQ13434 485 aaPredicted RBP3.67□□□□□ -1.82
UBE2W-202ENST00000422906 DMDP11532 3685 aa3.67□□□□□ -1.82
UBE2W-202ENST00000422906 MSH6P52701 1360 aa3.66□□□□□ -1.82
UBE2W-202ENST00000422906 ZNF784Q8NCA9 323 aaPredicted RBP3.66□□□□□ -1.82
UBE2W-202ENST00000422906 LRPPRCP42704 1394 aaKnown RBP3.66□□□□□ -1.82
UBE2W-202ENST00000422906 IDI1Q13907 227 aa3.65□□□□□ -1.82
UBE2W-202ENST00000422906 VPS72Q15906 364 aa3.65□□□□□ -1.82
UBE2W-202ENST00000422906 NGLY1Q96IV0 654 aa3.65□□□□□ -1.82
UBE2W-202ENST00000422906 SPATA31A3Q5VYP0 1347 aa3.65□□□□□ -1.82
UBE2W-202ENST00000422906 CPSF1Q10570 1443 aaKnown RBP3.65□□□□□ -1.83
UBE2W-202ENST00000422906 ZNF236Q9UL36 1845 aa3.65□□□□□ -1.83
UBE2W-202ENST00000422906 HNRNPMP52272 730 aaKnown RBP eCLIP3.64□□□□□ -1.83
UBE2W-202ENST00000422906 PRDM10Q9NQV6 1147 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms