RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.23
HERC3-204ENST00000422770 ATAD2Q6PL18 1390 aa13.58□□□□□ -0.23
HERC3-204ENST00000422770 ZNF772Q68DY9 489 aaPredicted RBP13.58□□□□□ -0.24
HERC3-204ENST00000422770 TMC1Q8TDI8 760 aa13.58□□□□□ -0.24
HERC3-204ENST00000422770 PLCH1Q4KWH8 1693 aa13.58□□□□□ -0.24
HERC3-204ENST00000422770 CRYBG1Q9Y4K1 1723 aa13.58□□□□□ -0.24
HERC3-204ENST00000422770 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.24
HERC3-204ENST00000422770 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
HERC3-204ENST00000422770 PLEKHG3A1L390 1219 aa13.57□□□□□ -0.24
HERC3-204ENST00000422770 POTEAQ6S8J7 498 aa13.57□□□□□ -0.24
HERC3-204ENST00000422770 MON2Q7Z3U7 1717 aa13.56□□□□□ -0.24
HERC3-204ENST00000422770 ABTB2Q8N961 1025 aa13.55□□□□□ -0.24
HERC3-204ENST00000422770 USP21Q9UK80 565 aa13.54□□□□□ -0.24
HERC3-204ENST00000422770 USP6P35125 1406 aa13.54□□□□□ -0.24
HERC3-204ENST00000422770 TMF1P82094 1093 aa13.53□□□□□ -0.24
HERC3-204ENST00000422770 POLR3GLQ9BT43 218 aa13.53□□□□□ -0.24
HERC3-204ENST00000422770 KTN1Q86UP2 1357 aaKnown RBP13.53□□□□□ -0.24
HERC3-204ENST00000422770 NRKQ7Z2Y5 1582 aa13.53□□□□□ -0.24
HERC3-204ENST00000422770 PIK3C2AO00443 1686 aa13.53□□□□□ -0.24
HERC3-204ENST00000422770 ZBTB7CA1YPR0 619 aa13.52□□□□□ -0.25
HERC3-204ENST00000422770 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.25
HERC3-204ENST00000422770 TESK2Q96S53 571 aa13.52□□□□□ -0.25
HERC3-204ENST00000422770 QTRT2Q9H974 415 aaKnown RBP13.52□□□□□ -0.25
HERC3-204ENST00000422770 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.52□□□□□ -0.25
HERC3-204ENST00000422770 NWD2Q9ULI1 1742 aa13.52□□□□□ -0.25
HERC3-204ENST00000422770 COL14A1Q05707 1796 aaKnown RBP13.52□□□□□ -0.25
HERC3-204ENST00000422770 CCDC9Q9Y3X0 531 aaKnown RBP13.51□□□□□ -0.25
HERC3-204ENST00000422770 SLC24A1O60721 1099 aa13.5□□□□□ -0.25
HERC3-204ENST00000422770 RXRBP28702 533 aa13.5□□□□□ -0.25
HERC3-204ENST00000422770 NLRP6P59044 892 aa13.5□□□□□ -0.25
HERC3-204ENST00000422770 EIF4G2P78344 907 aaKnown RBP eCLIP13.5□□□□□ -0.25
HERC3-204ENST00000422770 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.5□□□□□ -0.25
HERC3-204ENST00000422770 PRDM11Q9NQV5 511 aa13.5□□□□□ -0.25
HERC3-204ENST00000422770 SOX12O15370 315 aa13.49□□□□□ -0.25
HERC3-204ENST00000422770 NLRP13Q86W25 1043 aa13.49□□□□□ -0.25
HERC3-204ENST00000422770 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
HERC3-204ENST00000422770 SLC12A5Q9H2X9 1139 aa13.49□□□□□ -0.25
HERC3-204ENST00000422770 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
HERC3-204ENST00000422770 BRD4O60885 1362 aaPredicted RBP13.48□□□□□ -0.25
HERC3-204ENST00000422770 NRAPQ86VF7 1730 aa13.48□□□□□ -0.25
HERC3-204ENST00000422770 MYOM1P52179 1685 aa13.48□□□□□ -0.25
HERC3-204ENST00000422770 HSPA5P11021 654 aaKnown RBP13.48□□□□□ -0.25
HERC3-204ENST00000422770 ZC3H6P61129 1189 aaKnown RBP13.48□□□□□ -0.25
HERC3-204ENST00000422770 CDCA8Q53HL2 280 aa13.48□□□□□ -0.25
HERC3-204ENST00000422770 TRPC5Q9UL62 973 aaPredicted RBP13.48□□□□□ -0.25
HERC3-204ENST00000422770 CPSF1Q10570 1443 aaKnown RBP13.47□□□□□ -0.25
HERC3-204ENST00000422770 A0A1W2PP64 1363 aa13.47□□□□□ -0.25
HERC3-204ENST00000422770 TTC21BQ7Z4L5 1316 aa13.47□□□□□ -0.25
HERC3-204ENST00000422770 CHRNA2Q15822 529 aa13.47□□□□□ -0.25
HERC3-204ENST00000422770 KIAA0232Q92628 1395 aa13.46□□□□□ -0.25
HERC3-204ENST00000422770 NINLQ9Y2I6 1382 aa13.46□□□□□ -0.25
HERC3-204ENST00000422770 KIF20BQ96Q89 1820 aa13.46□□□□□ -0.25
HERC3-204ENST00000422770 TTC21AQ8NDW8 1320 aa13.46□□□□□ -0.25
HERC3-204ENST00000422770 SLIT2O94813 1529 aa13.46□□□□□ -0.25
HERC3-204ENST00000422770 FAM83GA6ND36 823 aa13.46□□□□□ -0.25
HERC3-204ENST00000422770 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
HERC3-204ENST00000422770 FNBP4Q8N3X1 1017 aaPredicted RBP13.46□□□□□ -0.25
HERC3-204ENST00000422770 BTG4Q9NY30 223 aa13.46□□□□□ -0.25
HERC3-204ENST00000422770 BCL9LQ86UU0 1499 aa13.46□□□□□ -0.25
HERC3-204ENST00000422770 CD163L1Q9NR16 1453 aa13.46□□□□□ -0.25
HERC3-204ENST00000422770 A0A0G2JS52 829 aa13.45□□□□□ -0.26
HERC3-204ENST00000422770 MYT1Q01538 1121 aa13.45□□□□□ -0.26
HERC3-204ENST00000422770 UNC5CLQ8IV45 518 aa13.45□□□□□ -0.26
HERC3-204ENST00000422770 ATRNO75882 1429 aa13.45□□□□□ -0.26
HERC3-204ENST00000422770 EDC4Q6P2E9 1401 aaKnown RBP13.45□□□□□ -0.26
HERC3-204ENST00000422770 LTN1O94822 1766 aa13.45□□□□□ -0.26
HERC3-204ENST00000422770 RGPD5Q99666 1765 aa13.45□□□□□ -0.26
HERC3-204ENST00000422770 NME9Q86XW9 330 aa13.44□□□□□ -0.26
HERC3-204ENST00000422770 PUS7Q96PZ0 661 aaKnown RBP13.44□□□□□ -0.26
HERC3-204ENST00000422770 STRN4Q9NRL3 753 aa13.44□□□□□ -0.26
HERC3-204ENST00000422770 SLIT3O75094 1523 aa13.44□□□□□ -0.26
HERC3-204ENST00000422770 USP19O94966 1318 aa13.43□□□□□ -0.26
HERC3-204ENST00000422770 RGS12O14924 1447 aa13.43□□□□□ -0.26
HERC3-204ENST00000422770 GCP02774 474 aa13.43□□□□□ -0.26
HERC3-204ENST00000422770 SSH2Q76I76 1423 aa13.43□□□□□ -0.26
HERC3-204ENST00000422770 GLI3P10071 1580 aa13.42□□□□□ -0.26
HERC3-204ENST00000422770 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
HERC3-204ENST00000422770 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
HERC3-204ENST00000422770 BRWD3Q6RI45 1802 aa13.41□□□□□ -0.26
HERC3-204ENST00000422770 USP54Q70EL1 1684 aa13.41□□□□□ -0.26
HERC3-204ENST00000422770 EVA1CP58658 441 aa13.41□□□□□ -0.26
HERC3-204ENST00000422770 GJD4Q96KN9 370 aaPredicted RBP13.41□□□□□ -0.26
HERC3-204ENST00000422770 CDK12Q9NYV4 1490 aaPredicted RBP13.41□□□□□ -0.26
HERC3-204ENST00000422770 LMO7Q8WWI1 1683 aa13.4□□□□□ -0.26
HERC3-204ENST00000422770 VPS72Q15906 364 aa13.39□□□□□ -0.27
HERC3-204ENST00000422770 KCNH5Q8NCM2 988 aa13.39□□□□□ -0.27
HERC3-204ENST00000422770 CPDO75976 1380 aa13.38□□□□□ -0.27
HERC3-204ENST00000422770 COG3Q96JB2 828 aa13.38□□□□□ -0.27
HERC3-204ENST00000422770 USP35Q9P2H5 1018 aa13.38□□□□□ -0.27
HERC3-204ENST00000422770 NFAT5O94916 1531 aa13.38□□□□□ -0.27
HERC3-204ENST00000422770 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
HERC3-204ENST00000422770 COL18A1P39060 1754 aa13.37□□□□□ -0.27
HERC3-204ENST00000422770 NSD3Q9BZ95 1437 aa13.37□□□□□ -0.27
HERC3-204ENST00000422770 FAM98CQ17RN3 349 aaKnown RBP13.36□□□□□ -0.27
HERC3-204ENST00000422770 USP31Q70CQ4 1352 aa13.35□□□□□ -0.27
HERC3-204ENST00000422770 CSB-PGBD3P0DP91 1061 aa13.35□□□□□ -0.27
HERC3-204ENST00000422770 GGNBP2Q9H3C7 697 aa13.35□□□□□ -0.27
HERC3-204ENST00000422770 OVOS2A0A0J9YW53 1432 aa13.35□□□□□ -0.27
HERC3-204ENST00000422770 OVOS2Q6IE36 1432 aa13.35□□□□□ -0.27
HERC3-204ENST00000422770 COL5A2P05997 1499 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms