RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 HSP90B1P14625 803 aaKnown RBP16.41■□□□□ 0.22
CALD1-205ENST00000422748 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
CALD1-205ENST00000422748 MVPQ14764 893 aaKnown RBP16.4■□□□□ 0.22
CALD1-205ENST00000422748 ZSCAN23Q3MJ62 389 aa16.4■□□□□ 0.22
CALD1-205ENST00000422748 CAVIN1Q6NZI2 390 aaKnown RBP16.4■□□□□ 0.22
CALD1-205ENST00000422748 NCLP19338 710 aaKnown RBP16.4■□□□□ 0.22
CALD1-205ENST00000422748 NEUROD2Q15784 382 aa16.4■□□□□ 0.22
CALD1-205ENST00000422748 CLEC17AQ6ZS10 378 aa16.39■□□□□ 0.21
CALD1-205ENST00000422748 KIF2CQ99661 725 aa16.39■□□□□ 0.21
CALD1-205ENST00000422748 ZFYVE16Q7Z3T8 1539 aa16.39■□□□□ 0.21
CALD1-205ENST00000422748 EIF2AK4Q9P2K8 1649 aaKnown RBP16.39■□□□□ 0.21
CALD1-205ENST00000422748 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
CALD1-205ENST00000422748 GTF2E1P29083 439 aaPredicted RBP16.39■□□□□ 0.21
CALD1-205ENST00000422748 SYNMO15061 1565 aa16.38■□□□□ 0.21
CALD1-205ENST00000422748 K7ELQ4 463 aaPredicted RBP16.38■□□□□ 0.21
CALD1-205ENST00000422748 IGSF3O75054 1194 aa16.38■□□□□ 0.21
CALD1-205ENST00000422748 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
CALD1-205ENST00000422748 AFAP1Q8N556 730 aa16.38■□□□□ 0.21
CALD1-205ENST00000422748 MCM5P33992 734 aa16.38■□□□□ 0.21
CALD1-205ENST00000422748 GAS2L2Q8NHY3 880 aa16.38■□□□□ 0.21
CALD1-205ENST00000422748 JARID2Q92833 1246 aaPredicted RBP16.38■□□□□ 0.21
CALD1-205ENST00000422748 PRIM1P49642 420 aaKnown RBP16.37■□□□□ 0.21
CALD1-205ENST00000422748 RRP7AQ9Y3A4 280 aaKnown RBP16.37■□□□□ 0.21
CALD1-205ENST00000422748 AK9Q5TCS8 1911 aa16.37■□□□□ 0.21
CALD1-205ENST00000422748 TNNT2P45379 298 aaPredicted RBP16.36■□□□□ 0.21
CALD1-205ENST00000422748 MCTP1Q6DN14 999 aa16.36■□□□□ 0.21
CALD1-205ENST00000422748 CBX1P83916 185 aa16.36■□□□□ 0.21
CALD1-205ENST00000422748 INO80Q9ULG1 1556 aaPredicted RBP16.36■□□□□ 0.21
CALD1-205ENST00000422748 IQGAP3Q86VI3 1631 aa16.35■□□□□ 0.21
CALD1-205ENST00000422748 STAC3Q96MF2 364 aa16.35■□□□□ 0.21
CALD1-205ENST00000422748 RBM42Q9BTD8 480 aaKnown RBP16.35■□□□□ 0.21
CALD1-205ENST00000422748 ADGRL1O94910 1474 aa16.35■□□□□ 0.21
CALD1-205ENST00000422748 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.35■□□□□ 0.21
CALD1-205ENST00000422748 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
CALD1-205ENST00000422748 CCDC39Q9UFE4 941 aa16.35■□□□□ 0.21
CALD1-205ENST00000422748 NPC1L1Q9UHC9 1359 aa16.35■□□□□ 0.21
CALD1-205ENST00000422748 PLA2R1Q13018 1463 aa16.35■□□□□ 0.21
CALD1-205ENST00000422748 SPAG9O60271 1321 aaKnown RBP16.35■□□□□ 0.21
CALD1-205ENST00000422748 HDAC1Q13547 482 aaPredicted RBP16.34■□□□□ 0.21
CALD1-205ENST00000422748 TSC1Q92574 1164 aa16.34■□□□□ 0.21
CALD1-205ENST00000422748 ARHGAP31Q2M1Z3 1444 aa16.34■□□□□ 0.21
CALD1-205ENST00000422748 FTSJ3Q8IY81 847 aaKnown RBP16.34■□□□□ 0.21
CALD1-205ENST00000422748 RNF17Q9BXT8 1623 aaKnown RBP16.34■□□□□ 0.21
CALD1-205ENST00000422748 ZBTB7CA1YPR0 619 aa16.33■□□□□ 0.21
CALD1-205ENST00000422748 ZNF710Q8N1W2 664 aa16.33■□□□□ 0.21
CALD1-205ENST00000422748 MYRIPQ8NFW9 859 aa16.33■□□□□ 0.21
CALD1-205ENST00000422748 LMBRD1Q9NUN5 540 aa16.33■□□□□ 0.21
CALD1-205ENST00000422748 KIF20AO95235 890 aa16.33■□□□□ 0.2
CALD1-205ENST00000422748 DZIP1LQ8IYY4 767 aaKnown RBP16.33■□□□□ 0.2
CALD1-205ENST00000422748 RIMBP3CA6NJZ7 1639 aa16.32■□□□□ 0.2
CALD1-205ENST00000422748 RIMBP3BA6NNM3 1639 aa16.32■□□□□ 0.2
CALD1-205ENST00000422748 RIMBP3Q9UFD9 1639 aa16.32■□□□□ 0.2
CALD1-205ENST00000422748 MYOM1P52179 1685 aa16.32■□□□□ 0.2
CALD1-205ENST00000422748 ZKSCAN2Q63HK3 967 aa16.32■□□□□ 0.2
CALD1-205ENST00000422748 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
CALD1-205ENST00000422748 ATP7AQ04656 1500 aa16.32■□□□□ 0.2
CALD1-205ENST00000422748 CD109Q6YHK3 1445 aa16.32■□□□□ 0.2
CALD1-205ENST00000422748 ATP2B3Q16720 1220 aa16.31■□□□□ 0.2
CALD1-205ENST00000422748 CDCA8Q53HL2 280 aa16.31■□□□□ 0.2
CALD1-205ENST00000422748 LETM1O95202 739 aaPredicted RBP16.3■□□□□ 0.2
CALD1-205ENST00000422748 KIAA2012Q0VF49 1180 aa16.29■□□□□ 0.2
CALD1-205ENST00000422748 DNTTIP2Q5QJE6 756 aaKnown RBP16.29■□□□□ 0.2
CALD1-205ENST00000422748 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
CALD1-205ENST00000422748 LNPKQ9C0E8 428 aa16.29■□□□□ 0.2
CALD1-205ENST00000422748 GPT2Q8TD30 523 aa16.28■□□□□ 0.2
CALD1-205ENST00000422748 BCCIPQ9P287 314 aaKnown RBP eCLIP16.28■□□□□ 0.2
CALD1-205ENST00000422748 DEPDC5O75140 1603 aa16.28■□□□□ 0.2
CALD1-205ENST00000422748 ITPRIPQ8IWB1 547 aa16.28■□□□□ 0.2
CALD1-205ENST00000422748 WDR63Q8IWG1 891 aa16.28■□□□□ 0.2
CALD1-205ENST00000422748 IQGAP1P46940 1657 aa16.28■□□□□ 0.2
CALD1-205ENST00000422748 CYB5RLQ6IPT4 315 aa16.27■□□□□ 0.2
CALD1-205ENST00000422748 RUNDC1Q96C34 613 aa16.27■□□□□ 0.2
CALD1-205ENST00000422748 PHF23Q9BUL5 403 aaPredicted RBP16.27■□□□□ 0.2
CALD1-205ENST00000422748 NAP1L2Q9ULW6 460 aaPredicted RBP16.27■□□□□ 0.2
CALD1-205ENST00000422748 CFAP74Q9C0B2 1584 aa16.27■□□□□ 0.2
CALD1-205ENST00000422748 KIDINS220Q9ULH0 1771 aa16.27■□□□□ 0.2
CALD1-205ENST00000422748 LRSAM1Q6UWE0 723 aa16.27■□□□□ 0.19
CALD1-205ENST00000422748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.27■□□□□ 0.194e-7■■■■□ 20
CALD1-205ENST00000422748 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
CALD1-205ENST00000422748 PRPF40AO75400 957 aaKnown RBP16.26■□□□□ 0.19
CALD1-205ENST00000422748 NUCB1Q02818 461 aa16.26■□□□□ 0.19
CALD1-205ENST00000422748 PKP1Q13835 747 aa16.26■□□□□ 0.19
CALD1-205ENST00000422748 TMEM51Q9NW97 253 aa16.26■□□□□ 0.19
CALD1-205ENST00000422748 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
CALD1-205ENST00000422748 SYCE3A1L190 88 aa16.26■□□□□ 0.19
CALD1-205ENST00000422748 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
CALD1-205ENST00000422748 CFAP44Q96MT7 982 aa16.26■□□□□ 0.19
CALD1-205ENST00000422748 ATP10AO60312 1499 aa16.26■□□□□ 0.19
CALD1-205ENST00000422748 IQSEC2Q5JU85 1478 aa16.26■□□□□ 0.19
CALD1-205ENST00000422748 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
CALD1-205ENST00000422748 ZNF518AQ6AHZ1 1483 aa16.25■□□□□ 0.19
CALD1-205ENST00000422748 CYP2E1P05181 493 aaPredicted RBP16.25■□□□□ 0.19
CALD1-205ENST00000422748 PTMAP06454 111 aaKnown RBP16.25■□□□□ 0.19
CALD1-205ENST00000422748 TRIM27P14373 513 aa16.25■□□□□ 0.19
CALD1-205ENST00000422748 RNF214Q8ND24 703 aa16.25■□□□□ 0.19
CALD1-205ENST00000422748 NUCB2P80303 420 aa16.25■□□□□ 0.19
CALD1-205ENST00000422748 BMP2KLQ5H9B9 411 aa16.25■□□□□ 0.19
CALD1-205ENST00000422748 TMEM63CQ9P1W3 806 aa16.25■□□□□ 0.19
CALD1-205ENST00000422748 DDX19BQ9UMR2 479 aa16.25■□□□□ 0.19
CALD1-205ENST00000422748 PRIMPOLQ96LW4 560 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms