RNA–Protein interactions for RNA: ENST00000422713.1

TTC38-204, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 5

Gene TTC38, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-204ENST00000422713 TRIM26Q12899 539 aaPredicted RBP18.89■□□□□ 0.61
TTC38-204ENST00000422713 UNC5CLQ8IV45 518 aa18.89■□□□□ 0.61
TTC38-204ENST00000422713 POLR3AO14802 1390 aaPredicted RBP18.89■□□□□ 0.61
TTC38-204ENST00000422713 PHRF1Q9P1Y6 1649 aaKnown RBP18.89■□□□□ 0.61
TTC38-204ENST00000422713 NRAPQ86VF7 1730 aa18.88■□□□□ 0.61
TTC38-204ENST00000422713 SRPK2P78362 688 aaKnown RBP18.88■□□□□ 0.61
TTC38-204ENST00000422713 COL14A1Q05707 1796 aaKnown RBP18.87■□□□□ 0.61
TTC38-204ENST00000422713 PPIP5K1Q6PFW1 1433 aa18.87■□□□□ 0.61
TTC38-204ENST00000422713 CCDC61Q9Y6R9 512 aa18.87■□□□□ 0.61
TTC38-204ENST00000422713 ATAD2Q6PL18 1390 aa18.86■□□□□ 0.61
TTC38-204ENST00000422713 TONSLQ96HA7 1378 aa18.86■□□□□ 0.61
TTC38-204ENST00000422713 ACEP12821 1306 aa18.86■□□□□ 0.61
TTC38-204ENST00000422713 GJD4Q96KN9 370 aaPredicted RBP18.86■□□□□ 0.61
TTC38-204ENST00000422713 CABP2Q9NPB3 220 aa18.84■□□□□ 0.61
TTC38-204ENST00000422713 PLEKHG3A1L390 1219 aa18.83■□□□□ 0.6
TTC38-204ENST00000422713 NRKQ7Z2Y5 1582 aa18.82■□□□□ 0.6
TTC38-204ENST00000422713 NBPF8Q3BBV2 869 aa18.82■□□□□ 0.6
TTC38-204ENST00000422713 FAM83GA6ND36 823 aa18.81■□□□□ 0.6
TTC38-204ENST00000422713 VPS72Q15906 364 aa18.81■□□□□ 0.6
TTC38-204ENST00000422713 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
TTC38-204ENST00000422713 EVC2Q86UK5 1308 aa18.8■□□□□ 0.6
TTC38-204ENST00000422713 NUTM2GQ5VZR2 741 aa18.79■□□□□ 0.6
TTC38-204ENST00000422713 PRDM11Q9NQV5 511 aa18.79■□□□□ 0.6
TTC38-204ENST00000422713 KIAA0232Q92628 1395 aa18.79■□□□□ 0.6
TTC38-204ENST00000422713 BRWD3Q6RI45 1802 aa18.79■□□□□ 0.6
TTC38-204ENST00000422713 BTG4Q9NY30 223 aa18.78■□□□□ 0.6
TTC38-204ENST00000422713 USP6P35125 1406 aa18.77■□□□□ 0.6
TTC38-204ENST00000422713 CARD11Q9BXL7 1154 aa18.76■□□□□ 0.59
TTC38-204ENST00000422713 SBNO2Q9Y2G9 1366 aa18.76■□□□□ 0.59
TTC38-204ENST00000422713 ABTB2Q8N961 1025 aa18.75■□□□□ 0.59
TTC38-204ENST00000422713 CABP1Q9NZU7 370 aa18.75■□□□□ 0.59
TTC38-204ENST00000422713 BRD4O60885 1362 aaPredicted RBP18.75■□□□□ 0.59
TTC38-204ENST00000422713 PIK3C2AO00443 1686 aa18.75■□□□□ 0.59
TTC38-204ENST00000422713 USP19O94966 1318 aa18.74■□□□□ 0.59
TTC38-204ENST00000422713 AKAP12Q02952 1782 aa18.74■□□□□ 0.59
TTC38-204ENST00000422713 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
TTC38-204ENST00000422713 CHRNA2Q15822 529 aa18.73■□□□□ 0.59
TTC38-204ENST00000422713 A0A0G2JS52 829 aa18.72■□□□□ 0.59
TTC38-204ENST00000422713 ZC3H6P61129 1189 aaKnown RBP18.72■□□□□ 0.59
TTC38-204ENST00000422713 MYT1Q01538 1121 aa18.72■□□□□ 0.59
TTC38-204ENST00000422713 LMO7Q8WWI1 1683 aa18.72■□□□□ 0.59
TTC38-204ENST00000422713 SSH2Q76I76 1423 aa18.71■□□□□ 0.59
TTC38-204ENST00000422713 CPDO75976 1380 aa18.7■□□□□ 0.58
TTC38-204ENST00000422713 SLIT3O75094 1523 aa18.7■□□□□ 0.58
TTC38-204ENST00000422713 THSD7AQ9UPZ6 1657 aa18.7■□□□□ 0.58
TTC38-204ENST00000422713 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
TTC38-204ENST00000422713 SPATA31A5Q5VU36 1347 aa18.7■□□□□ 0.58
TTC38-204ENST00000422713 SPATA31A7Q8IWB4 1347 aa18.7■□□□□ 0.58
TTC38-204ENST00000422713 MON2Q7Z3U7 1717 aa18.69■□□□□ 0.58
TTC38-204ENST00000422713 NLRP13Q86W25 1043 aa18.69■□□□□ 0.58
TTC38-204ENST00000422713 ONECUT3O60422 494 aaPredicted RBP18.68■□□□□ 0.58
TTC38-204ENST00000422713 BLMP54132 1417 aaPredicted RBP18.67■□□□□ 0.58
TTC38-204ENST00000422713 CAMTA1Q9Y6Y1 1673 aa18.67■□□□□ 0.58
TTC38-204ENST00000422713 STRN4Q9NRL3 753 aa18.67■□□□□ 0.58
TTC38-204ENST00000422713 GCP02774 474 aa18.66■□□□□ 0.58
TTC38-204ENST00000422713 KRT27Q7Z3Y8 459 aa18.66■□□□□ 0.58
TTC38-204ENST00000422713 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
TTC38-204ENST00000422713 NLRP6P59044 892 aa18.65■□□□□ 0.58
TTC38-204ENST00000422713 SPATA31A1Q5TZJ5 1347 aa18.65■□□□□ 0.58
TTC38-204ENST00000422713 KTN1Q86UP2 1357 aaKnown RBP18.65■□□□□ 0.58
TTC38-204ENST00000422713 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.57
TTC38-204ENST00000422713 COL5A2P05997 1499 aaPredicted RBP18.64■□□□□ 0.57
TTC38-204ENST00000422713 CCDC125Q86Z20 511 aa18.63■□□□□ 0.57
TTC38-204ENST00000422713 CD163L1Q9NR16 1453 aa18.63■□□□□ 0.57
TTC38-204ENST00000422713 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
TTC38-204ENST00000422713 ZNF692Q9BU19 519 aaPredicted RBP18.62■□□□□ 0.57
TTC38-204ENST00000422713 TTC21AQ8NDW8 1320 aa18.62■□□□□ 0.57
TTC38-204ENST00000422713 EVA1CP58658 441 aa18.61■□□□□ 0.57
TTC38-204ENST00000422713 USP35Q9P2H5 1018 aa18.61■□□□□ 0.57
TTC38-204ENST00000422713 USP54Q70EL1 1684 aa18.6■□□□□ 0.57
TTC38-204ENST00000422713 NFAT5O94916 1531 aa18.6■□□□□ 0.57
TTC38-204ENST00000422713 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
TTC38-204ENST00000422713 AATKQ6ZMQ8 1374 aa18.59■□□□□ 0.57
TTC38-204ENST00000422713 TMC1Q8TDI8 760 aa18.59■□□□□ 0.57
TTC38-204ENST00000422713 RGPD1P0DJD0 1748 aa18.59■□□□□ 0.57
TTC38-204ENST00000422713 SRCAPQ6ZRS2 3230 aa18.59■□□□□ 0.57
TTC38-204ENST00000422713 COL18A1P39060 1754 aa18.58■□□□□ 0.57
TTC38-204ENST00000422713 USP47Q96K76 1375 aa18.58■□□□□ 0.57
TTC38-204ENST00000422713 SOX12O15370 315 aa18.58■□□□□ 0.56
TTC38-204ENST00000422713 SF3B2Q13435 895 aaKnown RBP18.58■□□□□ 0.56
TTC38-204ENST00000422713 ST20-MTHFSA0A0A6YYL1 179 aa18.57■□□□□ 0.56
TTC38-204ENST00000422713 TESK2Q96S53 571 aa18.57■□□□□ 0.56
TTC38-204ENST00000422713 PCGF6Q9BYE7 350 aa18.57■□□□□ 0.56
TTC38-204ENST00000422713 CRB1P82279 1406 aa18.57■□□□□ 0.56
TTC38-204ENST00000422713 EDC4Q6P2E9 1401 aaKnown RBP18.57■□□□□ 0.56
TTC38-204ENST00000422713 A0A1W2PP64 1363 aa18.56■□□□□ 0.56
TTC38-204ENST00000422713 FAM182BQ5T319 152 aa18.56■□□□□ 0.56
TTC38-204ENST00000422713 HDGFL2Q7Z4V5 671 aaPredicted RBP18.56■□□□□ 0.56
TTC38-204ENST00000422713 DEFB132Q7Z7B7 95 aa18.56■□□□□ 0.56
TTC38-204ENST00000422713 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.56■□□□□ 0.56
TTC38-204ENST00000422713 TNS1Q9HBL0 1735 aaKnown RBP18.56■□□□□ 0.56
TTC38-204ENST00000422713 ABCC6O95255 1503 aa18.55■□□□□ 0.56
TTC38-204ENST00000422713 PARP4Q9UKK3 1724 aaKnown RBP18.55■□□□□ 0.56
TTC38-204ENST00000422713 BARGINQ6ZT62 677 aa18.55■□□□□ 0.56
TTC38-204ENST00000422713 TCP11L2Q8N4U5 519 aa18.55■□□□□ 0.56
TTC38-204ENST00000422713 KCNH5Q8NCM2 988 aa18.55■□□□□ 0.56
TTC38-204ENST00000422713 SLC12A5Q9H2X9 1139 aa18.55■□□□□ 0.56
TTC38-204ENST00000422713 NINLQ9Y2I6 1382 aa18.55■□□□□ 0.56
TTC38-204ENST00000422713 CLSPNQ9HAW4 1339 aa18.54■□□□□ 0.56
TTC38-204ENST00000422713 WNK3Q9BYP7 1800 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms