RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 DNAJB2P25686 324 aa7.79□□□□□ -1.16
CDC42EP3-202ENST00000422687 DENND4BO75064 1496 aaPredicted RBP7.79□□□□□ -1.16
CDC42EP3-202ENST00000422687 A6NJR5 290 aa7.78□□□□□ -1.16
CDC42EP3-202ENST00000422687 SWT1Q5T5J6 900 aaKnown RBP7.78□□□□□ -1.16
CDC42EP3-202ENST00000422687 NECTIN2Q92692 538 aa7.78□□□□□ -1.16
CDC42EP3-202ENST00000422687 BEGAINQ9BUH8 593 aa7.78□□□□□ -1.16
CDC42EP3-202ENST00000422687 TMEM134Q9H6X4 195 aa7.78□□□□□ -1.16
CDC42EP3-202ENST00000422687 ZMYM4Q5VZL5 1548 aa7.78□□□□□ -1.16
CDC42EP3-202ENST00000422687 AKNAQ7Z591 1439 aa7.78□□□□□ -1.16
CDC42EP3-202ENST00000422687 MAGI2Q86UL8 1455 aa7.77□□□□□ -1.17
CDC42EP3-202ENST00000422687 HDGFP51858 240 aaKnown RBP7.77□□□□□ -1.17
CDC42EP3-202ENST00000422687 PPP4CP60510 307 aa7.77□□□□□ -1.17
CDC42EP3-202ENST00000422687 MCM6Q14566 821 aa7.77□□□□□ -1.17
CDC42EP3-202ENST00000422687 FAM161AQ3B820 660 aa7.77□□□□□ -1.17
CDC42EP3-202ENST00000422687 SLF2Q8IX21 1173 aa7.77□□□□□ -1.17
CDC42EP3-202ENST00000422687 RICTORQ6R327 1708 aa7.77□□□□□ -1.17
CDC42EP3-202ENST00000422687 ARID4BQ4LE39 1312 aaPredicted RBP7.77□□□□□ -1.17
CDC42EP3-202ENST00000422687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.76□□□□□ -1.17
CDC42EP3-202ENST00000422687 FANCAO15360 1455 aa7.75□□□□□ -1.17
CDC42EP3-202ENST00000422687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDC42EP3-202ENST00000422687 RCCD1A6NED2 376 aa7.75□□□□□ -1.17
CDC42EP3-202ENST00000422687 PLEKHD1A6NEE1 506 aa7.75□□□□□ -1.17
CDC42EP3-202ENST00000422687 UBTFP17480 764 aaKnown RBP7.75□□□□□ -1.17
CDC42EP3-202ENST00000422687 HSPA2P54652 639 aa7.75□□□□□ -1.17
CDC42EP3-202ENST00000422687 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDC42EP3-202ENST00000422687 POGZQ7Z3K3 1410 aa7.75□□□□□ -1.17
CDC42EP3-202ENST00000422687 YEATS2Q9ULM3 1422 aa7.75□□□□□ -1.17
CDC42EP3-202ENST00000422687 SLC4A3P48751 1232 aa7.74□□□□□ -1.17
CDC42EP3-202ENST00000422687 MYSM1Q5VVJ2 828 aa7.74□□□□□ -1.17
CDC42EP3-202ENST00000422687 NLRP7Q8WX94 980 aa7.74□□□□□ -1.17
CDC42EP3-202ENST00000422687 RIMS1Q86UR5 1692 aaKnown RBP7.73□□□□□ -1.17
CDC42EP3-202ENST00000422687 EFCAB5A4FU69 1503 aa7.73□□□□□ -1.17
CDC42EP3-202ENST00000422687 ZFYVE16Q7Z3T8 1539 aa7.73□□□□□ -1.17
CDC42EP3-202ENST00000422687 SIGLEC1Q9BZZ2 1709 aa7.73□□□□□ -1.17
CDC42EP3-202ENST00000422687 CFAP74Q9C0B2 1584 aa7.73□□□□□ -1.17
CDC42EP3-202ENST00000422687 PROCA1Q8NCQ7 364 aaPredicted RBP7.73□□□□□ -1.17
CDC42EP3-202ENST00000422687 ARHGEF12Q9NZN5 1544 aa7.73□□□□□ -1.17
CDC42EP3-202ENST00000422687 TTC37Q6PGP7 1564 aa7.72□□□□□ -1.17
CDC42EP3-202ENST00000422687 PLCH2O75038 1416 aa7.72□□□□□ -1.17
CDC42EP3-202ENST00000422687 EEA1Q15075 1411 aa7.72□□□□□ -1.17
CDC42EP3-202ENST00000422687 A0A0G2JS52 829 aa7.72□□□□□ -1.17
CDC42EP3-202ENST00000422687 CLUAP1Q96AJ1 413 aa7.72□□□□□ -1.17
CDC42EP3-202ENST00000422687 HECW1Q76N89 1606 aa7.71□□□□□ -1.17
CDC42EP3-202ENST00000422687 TRAK2O60296 914 aa7.71□□□□□ -1.18
CDC42EP3-202ENST00000422687 RNF40O75150 1001 aa7.71□□□□□ -1.18
CDC42EP3-202ENST00000422687 APLP1P51693 650 aa7.71□□□□□ -1.18
CDC42EP3-202ENST00000422687 KCNC4Q03721 635 aa7.71□□□□□ -1.18
CDC42EP3-202ENST00000422687 TJAP1Q5JTD0 557 aa7.71□□□□□ -1.18
CDC42EP3-202ENST00000422687 SCAPERQ9BY12 1400 aa7.7□□□□□ -1.18
CDC42EP3-202ENST00000422687 ATP10AO60312 1499 aa7.7□□□□□ -1.18
CDC42EP3-202ENST00000422687 RGS20O76081 388 aa7.7□□□□□ -1.18
CDC42EP3-202ENST00000422687 CLK2P49760 499 aaKnown RBP7.7□□□□□ -1.18
CDC42EP3-202ENST00000422687 PRR14Q9BWN1 585 aa7.7□□□□□ -1.18
CDC42EP3-202ENST00000422687 IRX2Q9BZI1 471 aaPredicted RBP7.7□□□□□ -1.18
CDC42EP3-202ENST00000422687 APBB1O00213 710 aa7.69□□□□□ -1.18
CDC42EP3-202ENST00000422687 DIXDC1Q155Q3 683 aa7.69□□□□□ -1.18
CDC42EP3-202ENST00000422687 TBC1D2Q9BYX2 928 aa7.69□□□□□ -1.18
CDC42EP3-202ENST00000422687 POLR3EQ9NVU0 708 aa7.69□□□□□ -1.18
CDC42EP3-202ENST00000422687 C9orf84Q5VXU9 1444 aa7.69□□□□□ -1.18
CDC42EP3-202ENST00000422687 TUSC1Q2TAM9 212 aa7.68□□□□□ -1.18
CDC42EP3-202ENST00000422687 PPP2R2DQ66LE6 453 aa7.68□□□□□ -1.18
CDC42EP3-202ENST00000422687 FNBP4Q8N3X1 1017 aaPredicted RBP7.68□□□□□ -1.18
CDC42EP3-202ENST00000422687 CDK13Q14004 1512 aaKnown RBP7.68□□□□□ -1.18
CDC42EP3-202ENST00000422687 SPDYE5A6NIY4 337 aa7.67□□□□□ -1.18
CDC42EP3-202ENST00000422687 CD46P15529 392 aa7.67□□□□□ -1.18
CDC42EP3-202ENST00000422687 MLECQ14165 292 aa7.67□□□□□ -1.18
CDC42EP3-202ENST00000422687 EFCAB2Q5VUJ9 269 aa7.67□□□□□ -1.18
CDC42EP3-202ENST00000422687 BANK1Q8NDB2 785 aa7.67□□□□□ -1.18
CDC42EP3-202ENST00000422687 MTRQ99707 1265 aa7.67□□□□□ -1.18
CDC42EP3-202ENST00000422687 IL21Q9HBE4 155 aa7.67□□□□□ -1.18
CDC42EP3-202ENST00000422687 FER1L4A9Z1Z3 1794 aa7.66□□□□□ -1.18
CDC42EP3-202ENST00000422687 FBXO31Q5XUX0 539 aaPredicted RBP7.66□□□□□ -1.18
CDC42EP3-202ENST00000422687 LIMD1Q9UGP4 676 aa7.66□□□□□ -1.18
CDC42EP3-202ENST00000422687 PTPRTO14522 1441 aa7.66□□□□□ -1.18
CDC42EP3-202ENST00000422687 ZNF518AQ6AHZ1 1483 aa7.66□□□□□ -1.18
CDC42EP3-202ENST00000422687 KDM5CP41229 1560 aa7.66□□□□□ -1.18
CDC42EP3-202ENST00000422687 REREQ9P2R6 1566 aa7.66□□□□□ -1.18
CDC42EP3-202ENST00000422687 SOCS7O14512 581 aa7.65□□□□□ -1.18
CDC42EP3-202ENST00000422687 SLC10A3P09131 477 aa7.65□□□□□ -1.18
CDC42EP3-202ENST00000422687 RFC5P40937 340 aa7.65□□□□□ -1.18
CDC42EP3-202ENST00000422687 CEBPAP49715 358 aaPredicted RBP7.65□□□□□ -1.18
CDC42EP3-202ENST00000422687 ILDR2Q71H61 639 aa7.65□□□□□ -1.18
CDC42EP3-202ENST00000422687 STRCQ7RTU9 1775 aa7.65□□□□□ -1.18
CDC42EP3-202ENST00000422687 PROSER2Q86WR7 435 aaPredicted RBP7.65□□□□□ -1.18
CDC42EP3-202ENST00000422687 PREX1Q8TCU6 1659 aa7.65□□□□□ -1.18
CDC42EP3-202ENST00000422687 SPIRE2Q8WWL2 714 aa7.65□□□□□ -1.18
CDC42EP3-202ENST00000422687 AGLP35573 1532 aa7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 MLH3Q9UHC1 1453 aa7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 TROQ12816 1431 aaPredicted RBP7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 UHRF1BP1Q6BDS2 1440 aa7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 SPTLC1O15269 473 aa7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 ACTN4O43707 911 aaKnown RBP7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 CFHP08603 1231 aa7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 RANGAP1P46060 587 aaPredicted RBP7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 KMT5BQ4FZB7 885 aa7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 AFAP1Q8N556 730 aa7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 POM121Q96HA1 1249 aa7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 ARID3AQ99856 593 aa7.64□□□□□ -1.19
CDC42EP3-202ENST00000422687 FMN1Q68DA7 1419 aa7.63□□□□□ -1.19
CDC42EP3-202ENST00000422687 GJA5P36382 358 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms