RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 VPS72Q15906 364 aa12.28□□□□□ -0.44
MDC1-204ENST00000422266 CABLES1Q8TDN4 633 aa12.28□□□□□ -0.44
MDC1-204ENST00000422266 TRPM1Q7Z4N2 1603 aa12.28□□□□□ -0.44
MDC1-204ENST00000422266 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
MDC1-204ENST00000422266 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
MDC1-204ENST00000422266 CCDC125Q86Z20 511 aa12.27□□□□□ -0.45
MDC1-204ENST00000422266 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
MDC1-204ENST00000422266 CARD11Q9BXL7 1154 aa12.27□□□□□ -0.45
MDC1-204ENST00000422266 PPIP5K1Q6PFW1 1433 aa12.27□□□□□ -0.45
MDC1-204ENST00000422266 ALS2Q96Q42 1657 aa12.26□□□□□ -0.45
MDC1-204ENST00000422266 NWD2Q9ULI1 1742 aa12.26□□□□□ -0.45
MDC1-204ENST00000422266 ABTB2Q8N961 1025 aa12.26□□□□□ -0.45
MDC1-204ENST00000422266 CABP2Q9NPB3 220 aa12.26□□□□□ -0.45
MDC1-204ENST00000422266 PRDM11Q9NQV5 511 aa12.26□□□□□ -0.45
MDC1-204ENST00000422266 CCDC9Q9Y3X0 531 aaKnown RBP12.26□□□□□ -0.45
MDC1-204ENST00000422266 SBNO2Q9Y2G9 1366 aa12.26□□□□□ -0.45
MDC1-204ENST00000422266 QRICH2Q9H0J4 1663 aa12.26□□□□□ -0.45
MDC1-204ENST00000422266 FAM83GA6ND36 823 aa12.25□□□□□ -0.45
MDC1-204ENST00000422266 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
MDC1-204ENST00000422266 TIMELESSQ9UNS1 1208 aa12.25□□□□□ -0.45
MDC1-204ENST00000422266 CLSPNQ9HAW4 1339 aa12.25□□□□□ -0.45
MDC1-204ENST00000422266 TOPAZ1Q8N9V7 1692 aa12.25□□□□□ -0.45
MDC1-204ENST00000422266 RALGAPBQ86X10 1494 aa12.24□□□□□ -0.45
MDC1-204ENST00000422266 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
MDC1-204ENST00000422266 CABP1Q9NZU7 370 aa12.24□□□□□ -0.45
MDC1-204ENST00000422266 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
MDC1-204ENST00000422266 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
MDC1-204ENST00000422266 COL14A1Q05707 1796 aaKnown RBP12.23□□□□□ -0.45
MDC1-204ENST00000422266 ABCA3Q99758 1704 aa12.23□□□□□ -0.45
MDC1-204ENST00000422266 USP6P35125 1406 aa12.21□□□□□ -0.45
MDC1-204ENST00000422266 CPDO75976 1380 aa12.2□□□□□ -0.46
MDC1-204ENST00000422266 KIAA0232Q92628 1395 aa12.2□□□□□ -0.46
MDC1-204ENST00000422266 PLCH1Q4KWH8 1693 aa12.2□□□□□ -0.46
MDC1-204ENST00000422266 USP19O94966 1318 aa12.2□□□□□ -0.46
MDC1-204ENST00000422266 TTC21AQ8NDW8 1320 aa12.2□□□□□ -0.46
MDC1-204ENST00000422266 A0A0G2JS52 829 aa12.2□□□□□ -0.46
MDC1-204ENST00000422266 EVA1CP58658 441 aa12.2□□□□□ -0.46
MDC1-204ENST00000422266 MYT1Q01538 1121 aa12.2□□□□□ -0.46
MDC1-204ENST00000422266 SEPT12Q8IYM1 358 aa12.2□□□□□ -0.46
MDC1-204ENST00000422266 GCP02774 474 aa12.19□□□□□ -0.46
MDC1-204ENST00000422266 NLRP6P59044 892 aa12.19□□□□□ -0.46
MDC1-204ENST00000422266 ZC3H6P61129 1189 aaKnown RBP12.19□□□□□ -0.46
MDC1-204ENST00000422266 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
MDC1-204ENST00000422266 KCNH5Q8NCM2 988 aa12.19□□□□□ -0.46
MDC1-204ENST00000422266 GLI3P10071 1580 aa12.18□□□□□ -0.46
MDC1-204ENST00000422266 SPATA31A5Q5VU36 1347 aa12.18□□□□□ -0.46
MDC1-204ENST00000422266 SPATA31A7Q8IWB4 1347 aa12.18□□□□□ -0.46
MDC1-204ENST00000422266 NUTM2GQ5VZR2 741 aa12.18□□□□□ -0.46
MDC1-204ENST00000422266 KRT27Q7Z3Y8 459 aa12.18□□□□□ -0.46
MDC1-204ENST00000422266 HDGFL2Q7Z4V5 671 aaPredicted RBP12.18□□□□□ -0.46
MDC1-204ENST00000422266 NINLQ9Y2I6 1382 aa12.18□□□□□ -0.46
MDC1-204ENST00000422266 TERF2IPQ9NYB0 399 aa12.17□□□□□ -0.46
MDC1-204ENST00000422266 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
MDC1-204ENST00000422266 KTN1Q86UP2 1357 aaKnown RBP12.17□□□□□ -0.46
MDC1-204ENST00000422266 PHRF1Q9P1Y6 1649 aaKnown RBP12.16□□□□□ -0.46
MDC1-204ENST00000422266 FAM98CQ17RN3 349 aaKnown RBP12.16□□□□□ -0.46
MDC1-204ENST00000422266 THRAP3Q9Y2W1 955 aaKnown RBP12.16□□□□□ -0.46
MDC1-204ENST00000422266 BLMP54132 1417 aaPredicted RBP12.16□□□□□ -0.46
MDC1-204ENST00000422266 CPSF1Q10570 1443 aaKnown RBP12.16□□□□□ -0.46
MDC1-204ENST00000422266 TTC21BQ7Z4L5 1316 aa12.15□□□□□ -0.46
MDC1-204ENST00000422266 NRAPQ86VF7 1730 aa12.15□□□□□ -0.46
MDC1-204ENST00000422266 SSH2Q76I76 1423 aa12.15□□□□□ -0.46
MDC1-204ENST00000422266 C11orf95C9JLR9 678 aaPredicted RBP12.15□□□□□ -0.46
MDC1-204ENST00000422266 CHRNA2Q15822 529 aa12.15□□□□□ -0.46
MDC1-204ENST00000422266 CDCA8Q53HL2 280 aa12.15□□□□□ -0.46
MDC1-204ENST00000422266 STRN4Q9NRL3 753 aa12.15□□□□□ -0.46
MDC1-204ENST00000422266 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
MDC1-204ENST00000422266 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
MDC1-204ENST00000422266 TMC1Q8TDI8 760 aa12.14□□□□□ -0.47
MDC1-204ENST00000422266 AATKQ6ZMQ8 1374 aa12.14□□□□□ -0.47
MDC1-204ENST00000422266 NRKQ7Z2Y5 1582 aa12.13□□□□□ -0.47
MDC1-204ENST00000422266 ST20-MTHFSA0A0A6YYL1 179 aa12.13□□□□□ -0.47
MDC1-204ENST00000422266 TMF1P82094 1093 aa12.13□□□□□ -0.47
MDC1-204ENST00000422266 TCP11L2Q8N4U5 519 aa12.13□□□□□ -0.47
MDC1-204ENST00000422266 PCGF6Q9BYE7 350 aa12.12□□□□□ -0.47
MDC1-204ENST00000422266 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
MDC1-204ENST00000422266 SLIT3O75094 1523 aa12.11□□□□□ -0.47
MDC1-204ENST00000422266 BAG6P46379 1132 aa12.11□□□□□ -0.47
MDC1-204ENST00000422266 EDC4Q6P2E9 1401 aaKnown RBP12.11□□□□□ -0.47
MDC1-204ENST00000422266 AKAP12Q02952 1782 aa12.1□□□□□ -0.47
MDC1-204ENST00000422266 USP31Q70CQ4 1352 aa12.1□□□□□ -0.47
MDC1-204ENST00000422266 PDE3BQ13370 1112 aa12.1□□□□□ -0.47
MDC1-204ENST00000422266 FAM196AQ6ZSG2 479 aa12.1□□□□□ -0.47
MDC1-204ENST00000422266 ARHGEF25Q86VW2 580 aa12.1□□□□□ -0.47
MDC1-204ENST00000422266 TESK2Q96S53 571 aa12.1□□□□□ -0.47
MDC1-204ENST00000422266 CDCA7Q9BWT1 371 aaPredicted RBP12.1□□□□□ -0.47
MDC1-204ENST00000422266 USP47Q96K76 1375 aa12.09□□□□□ -0.47
MDC1-204ENST00000422266 ZBTB7CA1YPR0 619 aa12.09□□□□□ -0.47
MDC1-204ENST00000422266 LARP1Q6PKG0 1096 aaKnown RBP12.09□□□□□ -0.47
MDC1-204ENST00000422266 SLC12A5Q9H2X9 1139 aa12.09□□□□□ -0.47
MDC1-204ENST00000422266 USP35Q9P2H5 1018 aa12.09□□□□□ -0.47
MDC1-204ENST00000422266 CRB1P82279 1406 aa12.09□□□□□ -0.47
MDC1-204ENST00000422266 CAMTA1Q9Y6Y1 1673 aa12.09□□□□□ -0.47
MDC1-204ENST00000422266 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.47
MDC1-204ENST00000422266 EP400Q96L91 3159 aa12.08□□□□□ -0.48
MDC1-204ENST00000422266 ABCC6O95255 1503 aa12.08□□□□□ -0.48
MDC1-204ENST00000422266 PIK3C2AO00443 1686 aa12.08□□□□□ -0.48
MDC1-204ENST00000422266 LMO7Q8WWI1 1683 aa12.08□□□□□ -0.48
MDC1-204ENST00000422266 TOM1L2Q6ZVM7 507 aa12.08□□□□□ -0.48
MDC1-204ENST00000422266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms