RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 HMGN5P82970 282 aaKnown RBP16.16■□□□□ 0.18
COL20A1-203ENST00000422202 GNL3LQ9NVN8 582 aaKnown RBP16.16■□□□□ 0.18
COL20A1-203ENST00000422202 KINO60870 393 aaKnown RBP16.16■□□□□ 0.18
COL20A1-203ENST00000422202 CCDC181Q5TID7 509 aa16.16■□□□□ 0.18
COL20A1-203ENST00000422202 LNPKQ9C0E8 428 aa16.15■□□□□ 0.18
COL20A1-203ENST00000422202 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.15■□□□□ 0.18
COL20A1-203ENST00000422202 TRIM5Q9C035 493 aa16.15■□□□□ 0.18
COL20A1-203ENST00000422202 DZIP1LQ8IYY4 767 aaKnown RBP16.14■□□□□ 0.18
COL20A1-203ENST00000422202 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.18
COL20A1-203ENST00000422202 PDE4AP27815 886 aa16.14■□□□□ 0.17
COL20A1-203ENST00000422202 ZNF76P36508 570 aa16.14■□□□□ 0.17
COL20A1-203ENST00000422202 NUCB2P80303 420 aa16.14■□□□□ 0.17
COL20A1-203ENST00000422202 STIM1Q13586 685 aa16.14■□□□□ 0.17
COL20A1-203ENST00000422202 CLASRPQ8N2M8 674 aaKnown RBP16.14■□□□□ 0.17
COL20A1-203ENST00000422202 ST20-MTHFSA0A0A6YYL1 179 aa16.13■□□□□ 0.17
COL20A1-203ENST00000422202 LEKR1Q6ZMV7 388 aa16.13■□□□□ 0.17
COL20A1-203ENST00000422202 L3MBTL2Q969R5 705 aa16.12■□□□□ 0.17
COL20A1-203ENST00000422202 LUC7LQ9NQ29 371 aaKnown RBP16.12■□□□□ 0.17
COL20A1-203ENST00000422202 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
COL20A1-203ENST00000422202 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
COL20A1-203ENST00000422202 FMN1Q68DA7 1419 aa16.12■□□□□ 0.17
COL20A1-203ENST00000422202 APAF1O14727 1248 aa16.12■□□□□ 0.17
COL20A1-203ENST00000422202 ABTB2Q8N961 1025 aa16.12■□□□□ 0.17
COL20A1-203ENST00000422202 ANAPC15P60006 121 aa16.12■□□□□ 0.17
COL20A1-203ENST00000422202 SOGA1O94964 1423 aa16.11■□□□□ 0.17
COL20A1-203ENST00000422202 CCDC158Q5M9N0 1113 aa16.11■□□□□ 0.17
COL20A1-203ENST00000422202 SPC24Q8NBT2 197 aa16.11■□□□□ 0.17
COL20A1-203ENST00000422202 PSMD1Q99460 953 aa16.11■□□□□ 0.17
COL20A1-203ENST00000422202 SERPINC1P01008 464 aa16.11■□□□□ 0.17
COL20A1-203ENST00000422202 RRP1P56182 461 aaKnown RBP16.11■□□□□ 0.17
COL20A1-203ENST00000422202 SMG6Q86US8 1419 aaKnown RBP16.1■□□□□ 0.17
COL20A1-203ENST00000422202 NUP133Q8WUM0 1156 aa16.1■□□□□ 0.17
COL20A1-203ENST00000422202 SSBP05455 408 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL20A1-203ENST00000422202 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL20A1-203ENST00000422202 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
COL20A1-203ENST00000422202 FAM193AP78312 1265 aa16.1■□□□□ 0.17
COL20A1-203ENST00000422202 SMARCA2P51531 1590 aa16.1■□□□□ 0.17
COL20A1-203ENST00000422202 SOGA3Q5TF21 947 aa16.1■□□□□ 0.17
COL20A1-203ENST00000422202 EXOC6Q8TAG9 804 aa16.1■□□□□ 0.17
COL20A1-203ENST00000422202 PIBF1Q8WXW3 757 aa16.1■□□□□ 0.17
COL20A1-203ENST00000422202 SCLT1Q96NL6 688 aa16.1■□□□□ 0.17
COL20A1-203ENST00000422202 RNF214Q8ND24 703 aa16.1■□□□□ 0.17
COL20A1-203ENST00000422202 FAM177A1Q8N128 213 aaPredicted RBP16.09■□□□□ 0.17
COL20A1-203ENST00000422202 CCDC112Q8NEF3 446 aa16.09■□□□□ 0.17
COL20A1-203ENST00000422202 FAM43AQ8N2R8 423 aa16.09■□□□□ 0.17
COL20A1-203ENST00000422202 ESCO1Q5FWF5 840 aa16.09■□□□□ 0.17
COL20A1-203ENST00000422202 WDHD1O75717 1129 aaPredicted RBP16.08■□□□□ 0.17
COL20A1-203ENST00000422202 KIAA0754O94854 1291 aa16.08■□□□□ 0.17
COL20A1-203ENST00000422202 USP5P45974 858 aa16.08■□□□□ 0.17
COL20A1-203ENST00000422202 PPFIBP1Q86W92 1011 aa16.08■□□□□ 0.17
COL20A1-203ENST00000422202 ZNF396Q96N95 335 aaPredicted RBP16.08■□□□□ 0.17
COL20A1-203ENST00000422202 STK3Q13188 491 aa16.08■□□□□ 0.17
COL20A1-203ENST00000422202 GOLGA6L7A0A1B0GV03 622 aa16.08■□□□□ 0.16
COL20A1-203ENST00000422202 DDX54Q8TDD1 881 aaKnown RBP16.08■□□□□ 0.16
COL20A1-203ENST00000422202 PLCD3Q8N3E9 789 aa16.08■□□□□ 0.16
COL20A1-203ENST00000422202 DRC1Q96MC2 740 aa16.08■□□□□ 0.16
COL20A1-203ENST00000422202 CCDC39Q9UFE4 941 aa16.08■□□□□ 0.16
COL20A1-203ENST00000422202 CCP110O43303 1012 aa16.08■□□□□ 0.16
COL20A1-203ENST00000422202 NASPP49321 788 aaPredicted RBP16.07■□□□□ 0.16
COL20A1-203ENST00000422202 TTLL12Q14166 644 aaPredicted RBP16.07■□□□□ 0.16
COL20A1-203ENST00000422202 RSPH4AQ5TD94 716 aa16.07■□□□□ 0.16
COL20A1-203ENST00000422202 DNAI2Q9GZS0 605 aa16.07■□□□□ 0.16
COL20A1-203ENST00000422202 MPHOSPH8Q99549 860 aa16.07■□□□□ 0.16
COL20A1-203ENST00000422202 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
COL20A1-203ENST00000422202 LETM1O95202 739 aaPredicted RBP16.07■□□□□ 0.16
COL20A1-203ENST00000422202 NF2P35240 595 aa16.06■□□□□ 0.16
COL20A1-203ENST00000422202 LRRFIP2Q9Y608 721 aaKnown RBP16.06■□□□□ 0.16
COL20A1-203ENST00000422202 MYL6BP14649 208 aa16.06■□□□□ 0.16
COL20A1-203ENST00000422202 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
COL20A1-203ENST00000422202 KANK4Q5T7N3 995 aaPredicted RBP16.06■□□□□ 0.16
COL20A1-203ENST00000422202 GRM1Q13255 1194 aa16.06■□□□□ 0.16
COL20A1-203ENST00000422202 STK38Q15208 465 aa16.06■□□□□ 0.16
COL20A1-203ENST00000422202 SIL1Q9H173 461 aa16.06■□□□□ 0.16
COL20A1-203ENST00000422202 CA8P35219 290 aa16.05■□□□□ 0.16
COL20A1-203ENST00000422202 GRIPAP1Q4V328 841 aa16.05■□□□□ 0.16
COL20A1-203ENST00000422202 RUNDC1Q96C34 613 aa16.05■□□□□ 0.16
COL20A1-203ENST00000422202 PIP4K2AP48426 406 aaPredicted RBP16.05■□□□□ 0.16
COL20A1-203ENST00000422202 CABP4P57796 275 aa16.05■□□□□ 0.16
COL20A1-203ENST00000422202 GNAI1P63096 354 aa16.05■□□□□ 0.16
COL20A1-203ENST00000422202 MIA2Q96PC5 1412 aa16.05■□□□□ 0.16
COL20A1-203ENST00000422202 C22orf23Q9BZE7 217 aa16.05■□□□□ 0.16
COL20A1-203ENST00000422202 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
COL20A1-203ENST00000422202 SURF6O75683 361 aaKnown RBP16.05■□□□□ 0.16
COL20A1-203ENST00000422202 GOLGA6L10A0A0M3HER8 536 aa16.05■□□□□ 0.16
COL20A1-203ENST00000422202 HIP1O00291 1037 aa16.05■□□□□ 0.16
COL20A1-203ENST00000422202 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
COL20A1-203ENST00000422202 TRIM22Q8IYM9 498 aa16.05■□□□□ 0.16
COL20A1-203ENST00000422202 GPRASP1Q5JY77 1395 aa16.04■□□□□ 0.16
COL20A1-203ENST00000422202 NLRP6P59044 892 aa16.04■□□□□ 0.16
COL20A1-203ENST00000422202 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL20A1-203ENST00000422202 RABEP1Q15276 862 aa16.04■□□□□ 0.16
COL20A1-203ENST00000422202 NFKBIBQ15653 356 aa16.04■□□□□ 0.16
COL20A1-203ENST00000422202 TXLNBQ8N3L3 684 aa16.04■□□□□ 0.16
COL20A1-203ENST00000422202 KIF7Q2M1P5 1343 aa16.04■□□□□ 0.16
COL20A1-203ENST00000422202 TAF3Q5VWG9 929 aa16.04■□□□□ 0.16
COL20A1-203ENST00000422202 CCDC91Q7Z6B0 441 aa16.04■□□□□ 0.16
COL20A1-203ENST00000422202 NACAP1Q9BZK3 213 aa16.04■□□□□ 0.16
COL20A1-203ENST00000422202 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
COL20A1-203ENST00000422202 TOM1L2Q6ZVM7 507 aa16.03■□□□□ 0.16
COL20A1-203ENST00000422202 POTEJP0CG39 1038 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms