RNA–Protein interactions for RNA: ENST00000421582.2

CCDC107-205, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-205ENST00000421582 QRICH2Q9H0J4 1663 aa31.91■■■□□ 2.7
CCDC107-205ENST00000421582 VPS72Q15906 364 aa31.91■■■□□ 2.7
CCDC107-205ENST00000421582 TRPM1Q7Z4N2 1603 aa31.91■■■□□ 2.7
CCDC107-205ENST00000421582 POLR3AO14802 1390 aaPredicted RBP31.9■■■□□ 2.7
CCDC107-205ENST00000421582 CENPJQ9HC77 1338 aaPredicted RBP31.9■■■□□ 2.7
CCDC107-205ENST00000421582 NEUROD1Q13562 356 aa31.89■■■□□ 2.7
CCDC107-205ENST00000421582 CCDC61Q9Y6R9 512 aa31.88■■■□□ 2.69
CCDC107-205ENST00000421582 COL14A1Q05707 1796 aaKnown RBP31.88■■■□□ 2.69
CCDC107-205ENST00000421582 BRWD3Q6RI45 1802 aa31.87■■■□□ 2.69
CCDC107-205ENST00000421582 ACEP12821 1306 aa31.87■■■□□ 2.69
CCDC107-205ENST00000421582 PHRF1Q9P1Y6 1649 aaKnown RBP31.86■■■□□ 2.69
CCDC107-205ENST00000421582 PLEKHG3A1L390 1219 aa31.84■■■□□ 2.69
CCDC107-205ENST00000421582 BTG4Q9NY30 223 aa31.84■■■□□ 2.69
CCDC107-205ENST00000421582 CCDC9Q9Y3X0 531 aaKnown RBP31.84■■■□□ 2.69
CCDC107-205ENST00000421582 NBPF8Q3BBV2 869 aa31.83■■■□□ 2.69
CCDC107-205ENST00000421582 SRPK2P78362 688 aaKnown RBP31.82■■■□□ 2.68
CCDC107-205ENST00000421582 CABP2Q9NPB3 220 aa31.82■■■□□ 2.68
CCDC107-205ENST00000421582 PPIP5K1Q6PFW1 1433 aa31.81■■■□□ 2.68
CCDC107-205ENST00000421582 NUTM2GQ5VZR2 741 aa31.81■■■□□ 2.68
CCDC107-205ENST00000421582 SEPT12Q8IYM1 358 aa31.81■■■□□ 2.68
CCDC107-205ENST00000421582 ROCK2O75116 1388 aaKnown RBP31.77■■■□□ 2.68
CCDC107-205ENST00000421582 KIAA0232Q92628 1395 aa31.77■■■□□ 2.68
CCDC107-205ENST00000421582 PRDM11Q9NQV5 511 aa31.77■■■□□ 2.68
CCDC107-205ENST00000421582 ONECUT3O60422 494 aaPredicted RBP31.76■■■□□ 2.68
CCDC107-205ENST00000421582 NRKQ7Z2Y5 1582 aa31.75■■■□□ 2.67
CCDC107-205ENST00000421582 CHRNA2Q15822 529 aa31.72■■■□□ 2.67
CCDC107-205ENST00000421582 FAM98CQ17RN3 349 aaKnown RBP31.72■■■□□ 2.67
CCDC107-205ENST00000421582 ZC3H6P61129 1189 aaKnown RBP31.7■■■□□ 2.66
CCDC107-205ENST00000421582 ABTB2Q8N961 1025 aa31.7■■■□□ 2.66
CCDC107-205ENST00000421582 CCDC125Q86Z20 511 aa31.69■■■□□ 2.66
CCDC107-205ENST00000421582 CABP1Q9NZU7 370 aa31.69■■■□□ 2.66
CCDC107-205ENST00000421582 SPATA31A5Q5VU36 1347 aa31.69■■■□□ 2.66
CCDC107-205ENST00000421582 SPATA31A7Q8IWB4 1347 aa31.69■■■□□ 2.66
CCDC107-205ENST00000421582 BLMP54132 1417 aaPredicted RBP31.68■■■□□ 2.66
CCDC107-205ENST00000421582 A0A0G2JS52 829 aa31.68■■■□□ 2.66
CCDC107-205ENST00000421582 MYT1Q01538 1121 aa31.68■■■□□ 2.66
CCDC107-205ENST00000421582 KRT27Q7Z3Y8 459 aa31.68■■■□□ 2.66
CCDC107-205ENST00000421582 USP19O94966 1318 aa31.68■■■□□ 2.66
CCDC107-205ENST00000421582 USP6P35125 1406 aa31.67■■■□□ 2.66
CCDC107-205ENST00000421582 EVC2Q86UK5 1308 aa31.66■■■□□ 2.66
CCDC107-205ENST00000421582 THSD7AQ9UPZ6 1657 aa31.66■■■□□ 2.66
CCDC107-205ENST00000421582 SRCAPQ6ZRS2 3230 aa31.64■■■□□ 2.66
CCDC107-205ENST00000421582 LMO7Q8WWI1 1683 aa31.62■■■□□ 2.65
CCDC107-205ENST00000421582 STRN4Q9NRL3 753 aa31.62■■■□□ 2.65
CCDC107-205ENST00000421582 SSH2Q76I76 1423 aa31.61■■■□□ 2.65
CCDC107-205ENST00000421582 CAMTA1Q9Y6Y1 1673 aa31.61■■■□□ 2.65
CCDC107-205ENST00000421582 CPDO75976 1380 aa31.6■■■□□ 2.65
CCDC107-205ENST00000421582 SPATA31A1Q5TZJ5 1347 aa31.6■■■□□ 2.65
CCDC107-205ENST00000421582 BRD4O60885 1362 aaPredicted RBP31.6■■■□□ 2.65
CCDC107-205ENST00000421582 PIK3C2AO00443 1686 aa31.59■■■□□ 2.65
CCDC107-205ENST00000421582 DEFB132Q7Z7B7 95 aa31.59■■■□□ 2.65
CCDC107-205ENST00000421582 NLRP13Q86W25 1043 aa31.58■■■□□ 2.65
CCDC107-205ENST00000421582 TONSLQ96HA7 1378 aa31.58■■■□□ 2.65
CCDC107-205ENST00000421582 GCP02774 474 aa31.56■■■□□ 2.64
CCDC107-205ENST00000421582 SLIT3O75094 1523 aa31.56■■■□□ 2.64
CCDC107-205ENST00000421582 AKAP12Q02952 1782 aa31.55■■■□□ 2.64
CCDC107-205ENST00000421582 FAM182BQ5T319 152 aa31.55■■■□□ 2.64
CCDC107-205ENST00000421582 TRIM26Q12899 539 aaPredicted RBP31.53■■■□□ 2.64
CCDC107-205ENST00000421582 CARD11Q9BXL7 1154 aa31.53■■■□□ 2.64
CCDC107-205ENST00000421582 SBNO2Q9Y2G9 1366 aa31.52■■■□□ 2.64
CCDC107-205ENST00000421582 NLRP6P59044 892 aa31.51■■■□□ 2.64
CCDC107-205ENST00000421582 LARP1Q6PKG0 1096 aaKnown RBP31.51■■■□□ 2.64
CCDC107-205ENST00000421582 USP35Q9P2H5 1018 aa31.51■■■□□ 2.64
CCDC107-205ENST00000421582 ZRANB1Q9UGI0 708 aa31.51■■■□□ 2.64
CCDC107-205ENST00000421582 SF3B2Q13435 895 aaKnown RBP31.5■■■□□ 2.63
CCDC107-205ENST00000421582 COL5A2P05997 1499 aaPredicted RBP31.5■■■□□ 2.63
CCDC107-205ENST00000421582 EVA1CP58658 441 aa31.49■■■□□ 2.63
CCDC107-205ENST00000421582 CPSF1Q10570 1443 aaKnown RBP31.49■■■□□ 2.63
CCDC107-205ENST00000421582 TTC21BQ7Z4L5 1316 aa31.47■■■□□ 2.63
CCDC107-205ENST00000421582 ZBTB7CA1YPR0 619 aa31.46■■■□□ 2.63
CCDC107-205ENST00000421582 RGPD1P0DJD0 1748 aa31.45■■■□□ 2.63
CCDC107-205ENST00000421582 MON2Q7Z3U7 1717 aa31.45■■■□□ 2.63
CCDC107-205ENST00000421582 BARGINQ6ZT62 677 aa31.44■■■□□ 2.62
CCDC107-205ENST00000421582 ZNF692Q9BU19 519 aaPredicted RBP31.44■■■□□ 2.62
CCDC107-205ENST00000421582 TNS1Q9HBL0 1735 aaKnown RBP31.44■■■□□ 2.62
CCDC107-205ENST00000421582 COL18A1P39060 1754 aa31.43■■■□□ 2.62
CCDC107-205ENST00000421582 AATKQ6ZMQ8 1374 aa31.42■■■□□ 2.62
CCDC107-205ENST00000421582 KTN1Q86UP2 1357 aaKnown RBP31.42■■■□□ 2.62
CCDC107-205ENST00000421582 CD163L1Q9NR16 1453 aa31.42■■■□□ 2.62
CCDC107-205ENST00000421582 TCP11L2Q8N4U5 519 aa31.41■■■□□ 2.62
CCDC107-205ENST00000421582 TTC21AQ8NDW8 1320 aa31.39■■■□□ 2.62
CCDC107-205ENST00000421582 BAG6P46379 1132 aa31.38■■■□□ 2.61
CCDC107-205ENST00000421582 CRB1P82279 1406 aa31.37■■■□□ 2.61
CCDC107-205ENST00000421582 NFAT5O94916 1531 aa31.37■■■□□ 2.61
CCDC107-205ENST00000421582 SOX12O15370 315 aa31.36■■■□□ 2.61
CCDC107-205ENST00000421582 PARP4Q9UKK3 1724 aaKnown RBP31.35■■■□□ 2.61
CCDC107-205ENST00000421582 EN1Q05925 392 aaPredicted RBP31.35■■■□□ 2.61
CCDC107-205ENST00000421582 AXIN2Q9Y2T1 843 aa31.35■■■□□ 2.61
CCDC107-205ENST00000421582 ARHGEF25Q86VW2 580 aa31.33■■■□□ 2.61
CCDC107-205ENST00000421582 THRAP3Q9Y2W1 955 aaKnown RBP31.33■■■□□ 2.61
CCDC107-205ENST00000421582 DISP2A7MBM2 1401 aa31.33■■■□□ 2.61
CCDC107-205ENST00000421582 FAM196AQ6ZSG2 479 aa31.32■■■□□ 2.6
CCDC107-205ENST00000421582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.32■■■□□ 2.6
CCDC107-205ENST00000421582 TMC1Q8TDI8 760 aa31.32■■■□□ 2.6
CCDC107-205ENST00000421582 USP54Q70EL1 1684 aa31.31■■■□□ 2.6
CCDC107-205ENST00000421582 TRIM37O94972 964 aa31.31■■■□□ 2.6
CCDC107-205ENST00000421582 KCNH5Q8NCM2 988 aa31.31■■■□□ 2.6
CCDC107-205ENST00000421582 SLC12A5Q9H2X9 1139 aa31.31■■■□□ 2.6
CCDC107-205ENST00000421582 RGPD5Q99666 1765 aa31.31■■■□□ 2.6
CCDC107-205ENST00000421582 PDE3BQ13370 1112 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms