RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 RXRBP28702 533 aa20.92■□□□□ 0.94
FAM3A-209ENST00000421517 USP21Q9UK80 565 aa20.92■□□□□ 0.94
FAM3A-209ENST00000421517 RBM6P78332 1123 aaKnown RBP20.91■□□□□ 0.94
FAM3A-209ENST00000421517 BCL9LQ86UU0 1499 aa20.91■□□□□ 0.94
FAM3A-209ENST00000421517 QTRT2Q9H974 415 aaKnown RBP20.91■□□□□ 0.94
FAM3A-209ENST00000421517 CABP1Q9NZU7 370 aa20.91■□□□□ 0.94
FAM3A-209ENST00000421517 TRPC5Q9UL62 973 aaPredicted RBP20.91■□□□□ 0.94
FAM3A-209ENST00000421517 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
FAM3A-209ENST00000421517 ABCA3Q99758 1704 aa20.9■□□□□ 0.94
FAM3A-209ENST00000421517 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.9■□□□□ 0.94
FAM3A-209ENST00000421517 ATRNO75882 1429 aa20.89■□□□□ 0.94
FAM3A-209ENST00000421517 USP6P35125 1406 aa20.89■□□□□ 0.94
FAM3A-209ENST00000421517 SSH2Q76I76 1423 aa20.89■□□□□ 0.94
FAM3A-209ENST00000421517 LMOD2Q6P5Q4 547 aa20.89■□□□□ 0.93
FAM3A-209ENST00000421517 TESK2Q96S53 571 aa20.89■□□□□ 0.93
FAM3A-209ENST00000421517 PAK3O75914 559 aaPredicted RBP20.88■□□□□ 0.93
FAM3A-209ENST00000421517 HAP1P54257 671 aaPredicted RBP20.88■□□□□ 0.93
FAM3A-209ENST00000421517 CPSF1Q10570 1443 aaKnown RBP20.87■□□□□ 0.93
FAM3A-209ENST00000421517 CRYBG1Q9Y4K1 1723 aa20.87■□□□□ 0.93
FAM3A-209ENST00000421517 NINLQ9Y2I6 1382 aa20.87■□□□□ 0.93
FAM3A-209ENST00000421517 UNC5CLQ8IV45 518 aa20.87■□□□□ 0.93
FAM3A-209ENST00000421517 ST20-MTHFSA0A0A6YYL1 179 aa20.86■□□□□ 0.93
FAM3A-209ENST00000421517 NWD2Q9ULI1 1742 aa20.86■□□□□ 0.93
FAM3A-209ENST00000421517 CABLES1Q8TDN4 633 aa20.85■□□□□ 0.93
FAM3A-209ENST00000421517 USP19O94966 1318 aa20.84■□□□□ 0.93
FAM3A-209ENST00000421517 NLRP13Q86W25 1043 aa20.84■□□□□ 0.93
FAM3A-209ENST00000421517 ABTB2Q8N961 1025 aa20.84■□□□□ 0.93
FAM3A-209ENST00000421517 USP47Q96K76 1375 aa20.84■□□□□ 0.93
FAM3A-209ENST00000421517 TTC21AQ8NDW8 1320 aa20.83■□□□□ 0.93
FAM3A-209ENST00000421517 COL14A1Q05707 1796 aaKnown RBP20.82■□□□□ 0.92
FAM3A-209ENST00000421517 FAM83GA6ND36 823 aa20.81■□□□□ 0.92
FAM3A-209ENST00000421517 GJD4Q96KN9 370 aaPredicted RBP20.81■□□□□ 0.92
FAM3A-209ENST00000421517 CPDO75976 1380 aa20.81■□□□□ 0.92
FAM3A-209ENST00000421517 AKAP12Q02952 1782 aa20.8■□□□□ 0.92
FAM3A-209ENST00000421517 VPS72Q15906 364 aa20.8■□□□□ 0.92
FAM3A-209ENST00000421517 CDCA8Q53HL2 280 aa20.8■□□□□ 0.92
FAM3A-209ENST00000421517 PHRF1Q9P1Y6 1649 aaKnown RBP20.79■□□□□ 0.92
FAM3A-209ENST00000421517 TMF1P82094 1093 aa20.79■□□□□ 0.92
FAM3A-209ENST00000421517 TTC21BQ7Z4L5 1316 aa20.78■□□□□ 0.92
FAM3A-209ENST00000421517 PLCH1Q4KWH8 1693 aa20.77■□□□□ 0.92
FAM3A-209ENST00000421517 CD163L1Q9NR16 1453 aa20.77■□□□□ 0.92
FAM3A-209ENST00000421517 KTN1Q86UP2 1357 aaKnown RBP20.77■□□□□ 0.92
FAM3A-209ENST00000421517 TERF2IPQ9NYB0 399 aa20.77■□□□□ 0.92
FAM3A-209ENST00000421517 NRKQ7Z2Y5 1582 aa20.76■□□□□ 0.91
FAM3A-209ENST00000421517 ONECUT3O60422 494 aaPredicted RBP20.76■□□□□ 0.91
FAM3A-209ENST00000421517 GCP02774 474 aa20.76■□□□□ 0.91
FAM3A-209ENST00000421517 HDGFL2Q7Z4V5 671 aaPredicted RBP20.76■□□□□ 0.91
FAM3A-209ENST00000421517 SLIT3O75094 1523 aa20.76■□□□□ 0.91
FAM3A-209ENST00000421517 RGS12O14924 1447 aa20.76■□□□□ 0.91
FAM3A-209ENST00000421517 MON2Q7Z3U7 1717 aa20.75■□□□□ 0.91
FAM3A-209ENST00000421517 USP31Q70CQ4 1352 aa20.75■□□□□ 0.91
FAM3A-209ENST00000421517 PRDM11Q9NQV5 511 aa20.75■□□□□ 0.91
FAM3A-209ENST00000421517 KIAA0232Q92628 1395 aa20.74■□□□□ 0.91
FAM3A-209ENST00000421517 NLRP6P59044 892 aa20.74■□□□□ 0.91
FAM3A-209ENST00000421517 EDC4Q6P2E9 1401 aaKnown RBP20.74■□□□□ 0.91
FAM3A-209ENST00000421517 KCNH5Q8NCM2 988 aa20.74■□□□□ 0.91
FAM3A-209ENST00000421517 BTG4Q9NY30 223 aa20.74■□□□□ 0.91
FAM3A-209ENST00000421517 NRAPQ86VF7 1730 aa20.73■□□□□ 0.91
FAM3A-209ENST00000421517 SLC12A5Q9H2X9 1139 aa20.73■□□□□ 0.91
FAM3A-209ENST00000421517 PIK3C2AO00443 1686 aa20.73■□□□□ 0.91
FAM3A-209ENST00000421517 USP54Q70EL1 1684 aa20.72■□□□□ 0.91
FAM3A-209ENST00000421517 TMC1Q8TDI8 760 aa20.71■□□□□ 0.91
FAM3A-209ENST00000421517 GLI3P10071 1580 aa20.71■□□□□ 0.91
FAM3A-209ENST00000421517 NUTM2GQ5VZR2 741 aa20.7■□□□□ 0.9
FAM3A-209ENST00000421517 A0A1W2PP64 1363 aa20.7■□□□□ 0.9
FAM3A-209ENST00000421517 ANKRD36BQ8N2N9 1353 aa20.7■□□□□ 0.9
FAM3A-209ENST00000421517 AATKQ6ZMQ8 1374 aa20.69■□□□□ 0.9
FAM3A-209ENST00000421517 LMO7Q8WWI1 1683 aa20.68■□□□□ 0.9
FAM3A-209ENST00000421517 ZC3H6P61129 1189 aaKnown RBP20.68■□□□□ 0.9
FAM3A-209ENST00000421517 EIF4G2P78344 907 aaKnown RBP eCLIP20.68■□□□□ 0.9
FAM3A-209ENST00000421517 ABCC6O95255 1503 aa20.68■□□□□ 0.9
FAM3A-209ENST00000421517 SPATA31A5Q5VU36 1347 aa20.67■□□□□ 0.9
FAM3A-209ENST00000421517 SPATA31A7Q8IWB4 1347 aa20.67■□□□□ 0.9
FAM3A-209ENST00000421517 PLEKHG5O94827 1062 aa20.66■□□□□ 0.9
FAM3A-209ENST00000421517 ARHGEF25Q86VW2 580 aa20.65■□□□□ 0.9
FAM3A-209ENST00000421517 UPF1Q92900 1129 aaKnown RBP eCLIP20.64■□□□□ 0.89
FAM3A-209ENST00000421517 CAMTA1Q9Y6Y1 1673 aa20.64■□□□□ 0.89
FAM3A-209ENST00000421517 THRAP3Q9Y2W1 955 aaKnown RBP20.63■□□□□ 0.89
FAM3A-209ENST00000421517 SPATA31A1Q5TZJ5 1347 aa20.62■□□□□ 0.89
FAM3A-209ENST00000421517 CHRNA2Q15822 529 aa20.62■□□□□ 0.89
FAM3A-209ENST00000421517 NFAT5O94916 1531 aa20.62■□□□□ 0.89
FAM3A-209ENST00000421517 OVOS2A0A0J9YW53 1432 aa20.61■□□□□ 0.89
FAM3A-209ENST00000421517 OVOS2Q6IE36 1432 aa20.61■□□□□ 0.89
FAM3A-209ENST00000421517 BARGINQ6ZT62 677 aa20.61■□□□□ 0.89
FAM3A-209ENST00000421517 CCDC125Q86Z20 511 aa20.61■□□□□ 0.89
FAM3A-209ENST00000421517 SEPT12Q8IYM1 358 aa20.61■□□□□ 0.89
FAM3A-209ENST00000421517 CCDC9Q9Y3X0 531 aaKnown RBP20.61■□□□□ 0.89
FAM3A-209ENST00000421517 COL5A2P05997 1499 aaPredicted RBP20.61■□□□□ 0.89
FAM3A-209ENST00000421517 EVA1CP58658 441 aa20.6■□□□□ 0.89
FAM3A-209ENST00000421517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.6■□□□□ 0.89
FAM3A-209ENST00000421517 COL18A1P39060 1754 aa20.59■□□□□ 0.89
FAM3A-209ENST00000421517 HSPA5P11021 654 aaKnown RBP20.58■□□□□ 0.89
FAM3A-209ENST00000421517 NME9Q86XW9 330 aa20.58■□□□□ 0.89
FAM3A-209ENST00000421517 CRB1P82279 1406 aa20.57■□□□□ 0.88
FAM3A-209ENST00000421517 THSD7AQ9UPZ6 1657 aa20.57■□□□□ 0.88
FAM3A-209ENST00000421517 FAM98CQ17RN3 349 aaKnown RBP20.55■□□□□ 0.88
FAM3A-209ENST00000421517 TCP11L2Q8N4U5 519 aa20.55■□□□□ 0.88
FAM3A-209ENST00000421517 COG3Q96JB2 828 aa20.55■□□□□ 0.88
FAM3A-209ENST00000421517 STRN4Q9NRL3 753 aa20.55■□□□□ 0.88
FAM3A-209ENST00000421517 WDR17Q8IZU2 1322 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms