RNA–Protein interactions for RNA: ENST00000421516.1

MYD88-204, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MYD88, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-204ENST00000421516 DIP2AQ14689 1571 aa17.52■□□□□ 0.4
MYD88-204ENST00000421516 SETD1BQ9UPS6 1966 aaKnown RBP17.52■□□□□ 0.4
MYD88-204ENST00000421516 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.39
MYD88-204ENST00000421516 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.39
MYD88-204ENST00000421516 TBX22Q9Y458 520 aa17.52■□□□□ 0.39
MYD88-204ENST00000421516 PTPRUQ92729 1446 aa17.51■□□□□ 0.39
MYD88-204ENST00000421516 ANP32EQ9BTT0 268 aa17.51■□□□□ 0.39
MYD88-204ENST00000421516 ZRANB1Q9UGI0 708 aa17.51■□□□□ 0.39
MYD88-204ENST00000421516 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.51■□□□□ 0.39
MYD88-204ENST00000421516 KIF20BQ96Q89 1820 aa17.51■□□□□ 0.39
MYD88-204ENST00000421516 ATP7BP35670 1465 aa17.5■□□□□ 0.39
MYD88-204ENST00000421516 RUNDC1Q96C34 613 aa17.5■□□□□ 0.39
MYD88-204ENST00000421516 CANXP27824 592 aaKnown RBP17.49■□□□□ 0.39
MYD88-204ENST00000421516 ADGRB2O60241 1585 aa17.49■□□□□ 0.39
MYD88-204ENST00000421516 E9PSI1 815 aa17.48■□□□□ 0.39
MYD88-204ENST00000421516 TNNQ9UQP3 1299 aa17.47■□□□□ 0.39
MYD88-204ENST00000421516 AMOTL2Q9Y2J4 779 aa17.47■□□□□ 0.39
MYD88-204ENST00000421516 PPIP5K1Q6PFW1 1433 aa17.47■□□□□ 0.39
MYD88-204ENST00000421516 SHPRHQ149N8 1683 aa17.47■□□□□ 0.39
MYD88-204ENST00000421516 SOX12O15370 315 aa17.47■□□□□ 0.39
MYD88-204ENST00000421516 TSR2Q969E8 191 aaKnown RBP17.47■□□□□ 0.39
MYD88-204ENST00000421516 NUDT16Q96DE0 195 aaKnown RBP17.47■□□□□ 0.39
MYD88-204ENST00000421516 PANK1Q8TE04 598 aa17.46■□□□□ 0.39
MYD88-204ENST00000421516 NME9Q86XW9 330 aa17.45■□□□□ 0.38
MYD88-204ENST00000421516 NKTRP30414 1462 aaKnown RBP17.45■□□□□ 0.38
MYD88-204ENST00000421516 CLUAP1Q96AJ1 413 aa17.45■□□□□ 0.38
MYD88-204ENST00000421516 ITSN1Q15811 1721 aa17.45■□□□□ 0.38
MYD88-204ENST00000421516 XRN1Q8IZH2 1706 aaKnown RBP17.45■□□□□ 0.38
MYD88-204ENST00000421516 CDC42BPGQ6DT37 1551 aa17.44■□□□□ 0.38
MYD88-204ENST00000421516 PTCH1Q13635 1447 aa17.44■□□□□ 0.38
MYD88-204ENST00000421516 AKAP12Q02952 1782 aa17.44■□□□□ 0.38
MYD88-204ENST00000421516 HMOX1P09601 288 aa17.44■□□□□ 0.38
MYD88-204ENST00000421516 CCDC61Q9Y6R9 512 aa17.44■□□□□ 0.38
MYD88-204ENST00000421516 CPSF1Q10570 1443 aaKnown RBP17.43■□□□□ 0.38
MYD88-204ENST00000421516 MON2Q7Z3U7 1717 aa17.43■□□□□ 0.38
MYD88-204ENST00000421516 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
MYD88-204ENST00000421516 COG6Q9Y2V7 657 aa17.43■□□□□ 0.38
MYD88-204ENST00000421516 EMILIN1Q9Y6C2 1016 aa17.43■□□□□ 0.38
MYD88-204ENST00000421516 ERICH6Q7L0X2 663 aa17.43■□□□□ 0.38
MYD88-204ENST00000421516 ANKLE2Q86XL3 938 aa17.43■□□□□ 0.38
MYD88-204ENST00000421516 PRR36Q9H6K5 1346 aa17.42■□□□□ 0.38
MYD88-204ENST00000421516 RRS1Q15050 365 aaKnown RBP17.42■□□□□ 0.38
MYD88-204ENST00000421516 TOPAZ1Q8N9V7 1692 aa17.42■□□□□ 0.38
MYD88-204ENST00000421516 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
MYD88-204ENST00000421516 RGS3P49796 1198 aa17.41■□□□□ 0.38
MYD88-204ENST00000421516 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
MYD88-204ENST00000421516 EDC4Q6P2E9 1401 aaKnown RBP17.4■□□□□ 0.38
MYD88-204ENST00000421516 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
MYD88-204ENST00000421516 FANCIQ9NVI1 1328 aa17.4■□□□□ 0.38
MYD88-204ENST00000421516 CHD2O14647 1828 aaKnown RBP17.39■□□□□ 0.37
MYD88-204ENST00000421516 DIAPH1O60610 1272 aaKnown RBP17.39■□□□□ 0.37
MYD88-204ENST00000421516 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.37
MYD88-204ENST00000421516 THUMPD2Q9BTF0 503 aaKnown RBP17.37■□□□□ 0.37
MYD88-204ENST00000421516 KCNA6P17658 529 aa17.36■□□□□ 0.37
MYD88-204ENST00000421516 RBM33Q96EV2 1170 aaKnown RBP17.36■□□□□ 0.37
MYD88-204ENST00000421516 POLKQ9UBT6 870 aa17.36■□□□□ 0.37
MYD88-204ENST00000421516 IQSEC2Q5JU85 1478 aa17.36■□□□□ 0.37
MYD88-204ENST00000421516 RIPK4P57078 832 aa17.36■□□□□ 0.37
MYD88-204ENST00000421516 ZNF692Q9BU19 519 aaPredicted RBP17.36■□□□□ 0.37
MYD88-204ENST00000421516 RGPD8O14715 1765 aaPredicted RBP17.35■□□□□ 0.37
MYD88-204ENST00000421516 TMPOP42166 694 aaKnown RBP17.35■□□□□ 0.37
MYD88-204ENST00000421516 MAP2P11137 1827 aaKnown RBP17.35■□□□□ 0.37
MYD88-204ENST00000421516 PAK3O75914 559 aaPredicted RBP17.35■□□□□ 0.37
MYD88-204ENST00000421516 RLBP1P12271 317 aa17.35■□□□□ 0.37
MYD88-204ENST00000421516 PDE4AP27815 886 aa17.35■□□□□ 0.37
MYD88-204ENST00000421516 PRKAR2BP31323 418 aa17.35■□□□□ 0.37
MYD88-204ENST00000421516 RARSP54136 660 aaKnown RBP17.34■□□□□ 0.37
MYD88-204ENST00000421516 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
MYD88-204ENST00000421516 PLEKHF1Q96S99 279 aa17.34■□□□□ 0.37
MYD88-204ENST00000421516 COL3A1P02461 1466 aaPredicted RBP17.34■□□□□ 0.37
MYD88-204ENST00000421516 PLEKHG3A1L390 1219 aa17.34■□□□□ 0.37
MYD88-204ENST00000421516 EXOSC9Q06265 439 aaKnown RBP17.33■□□□□ 0.36
MYD88-204ENST00000421516 TRIM35Q9UPQ4 493 aa17.33■□□□□ 0.36
MYD88-204ENST00000421516 NRKQ7Z2Y5 1582 aa17.33■□□□□ 0.36
MYD88-204ENST00000421516 ACEP12821 1306 aa17.32■□□□□ 0.36
MYD88-204ENST00000421516 NPHP4O75161 1426 aaPredicted RBP17.32■□□□□ 0.36
MYD88-204ENST00000421516 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
MYD88-204ENST00000421516 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
MYD88-204ENST00000421516 IGHDP01880 384 aa17.32■□□□□ 0.36
MYD88-204ENST00000421516 ANP32AP39687 249 aaKnown RBP17.32■□□□□ 0.36
MYD88-204ENST00000421516 NGEFQ8N5V2 710 aa17.32■□□□□ 0.36
MYD88-204ENST00000421516 TCERG1O14776 1098 aaKnown RBP17.31■□□□□ 0.36
MYD88-204ENST00000421516 KDM2BQ8NHM5 1336 aa17.3■□□□□ 0.36
MYD88-204ENST00000421516 FMN2Q9NZ56 1722 aa17.3■□□□□ 0.36
MYD88-204ENST00000421516 PHF23Q9BUL5 403 aaPredicted RBP17.3■□□□□ 0.36
MYD88-204ENST00000421516 ELL2O00472 640 aaPredicted RBP17.3■□□□□ 0.36
MYD88-204ENST00000421516 WDR63Q8IWG1 891 aa17.3■□□□□ 0.36
MYD88-204ENST00000421516 COG3Q96JB2 828 aa17.3■□□□□ 0.36
MYD88-204ENST00000421516 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
MYD88-204ENST00000421516 SMC4Q9NTJ3 1288 aa17.29■□□□□ 0.36
MYD88-204ENST00000421516 NALCNQ8IZF0 1738 aa17.29■□□□□ 0.36
MYD88-204ENST00000421516 PNPLA6Q8IY17 1366 aa17.29■□□□□ 0.36
MYD88-204ENST00000421516 USP6P35125 1406 aa17.28■□□□□ 0.36
MYD88-204ENST00000421516 TTC21BQ7Z4L5 1316 aa17.28■□□□□ 0.36
MYD88-204ENST00000421516 NUTM2GQ5VZR2 741 aa17.28■□□□□ 0.36
MYD88-204ENST00000421516 CENPQQ7L2Z9 268 aaPredicted RBP17.28■□□□□ 0.36
MYD88-204ENST00000421516 ANKARQ7Z5J8 1434 aa17.27■□□□□ 0.36
MYD88-204ENST00000421516 NBR1Q14596 966 aa17.27■□□□□ 0.35
MYD88-204ENST00000421516 FAM83GA6ND36 823 aa17.26■□□□□ 0.35
MYD88-204ENST00000421516 DCTN1Q14203 1278 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms